Pseudoliparis swirei (Mariana hadal snailfish): 130193864
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Entry
130193864 CDS
T09868
Symbol
cherp
Name
(RefSeq) calcium homeostasis endoplasmic reticulum protein
KO
K12841
calcium homeostasis endoplasmic reticulum protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130193864 (cherp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pswi03041
]
130193864 (cherp)
Spliceosome [BR:
pswi03041
]
Complex A
U2 snRNP components
U2 related factors
130193864 (cherp)
Complex B
130193864 (cherp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7819
CID
Surp
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
130193864
NCBI-ProteinID:
XP_056270632
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All DBs
Position
5:complement(16351719..16369073)
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AA seq
918 aa
AA seq
DB search
MDIPNAPEDQELRNVIDKLAQFVARNGPEFEKMTMEKQKDNPKFSFLFGGEYFSYYKCKL
TMEHQQHPSTQDGEEYTSEEMYNPGAKDVVDIPTPSMSMTAPPPIPSPAAPSLDELIQQS
QWNLQQQEQHLHTLRQEQVTAAIALAMEQQTQKMLLESQLDITEFDNLLQPIIDTCTKDA
ISAGKNWMFNNAKTPQHCELMTSHLRNRITADGAHFELRLHLIYLTNDVLHHCQRKQQKD
LLAALQKVVVPIYCTSFLAVEEEKQQKITRLLQLWEKNGYFDEETIQQLQNPALGLGQYQ
ASLITEYAAVVQPIQLAFQQQSQALDTQHEEFIASLKQQQQPQLAPVAQLAPVAEHEKAM
PMTTKAGDVKPTMSVLLPGEFDGASSRPQDPSNPSGPSDITSNKPAWYETQHLGPWNPNQ
PPPFDPNQPPPPCPPWNSHEGMWNEQRDPGNWSGGPPREGGPWSGPGGSDQGPPSWNSYD
QQPPWGNQPDQPPWGQREPPFPPRMQRPPHFRGPFPPHQQPPPFNQPPPPHSFGRFPPRF
MQDDFPPRHHYDRPPYTPHHFDYAQGDYPAEMPGPPHHHPSQRLPPPGMGADHPPWGGSQ
HPEFSQPPHGFNGHSPQMRHRQQPVQDDPSLVPNVPYFDLPAGLMAPLVKLEDYDYKPLD
PKDIRLPPPMPPSDRLLAAVEAFYSPPSHDRPRNSEGWEQNGLYEFFRAKMRARRKKGQE
KRNSGRGGSRSSSQSRSRGRSSSRSSSRSSKSSRSQSRSSRSHSRSRSRSYSRSRSRSGS
RSSRSRSRSRSRSHSHSPAKRRHGPKVQSSSPVSSSVVAAPPTKPCADNRLGEENKGHQL
LMKMGWSGSGGLGAKEQGIQDPIKGGDVRDKWDQFKGVGVSLDDPYENYRRNKSYNFVAR
MKAREEVNREPQDPPPTD
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggatatccctaatgcccccgaagatcaagaactgaggaatgtcattgacaagctggcc
cagtttgtcgctcggaacgggccagagtttgaaaagatgacgatggagaaacagaaggac
aaccctaagttctccttcctctttgggggagaatacttcagctactacaagtgcaagctt
actatggagcaccagcagcatccttctacccaggatggggaggagtatacatctgaagaa
atgtacaatccaggcgccaaagacgtcgttgacatccctactccatcgatgtcgatgact
gcgccgcccccgattccttcgcctgcagcgccgtctttagatgagctcatccaacagagc
caatggaatttgcagcagcaagagcagcatctgcacacactcagacaggaacaagtgact
gcagccatagctctggctatggagcagcagacccagaaaatgcttttagaaagtcagttg
gacatcacagagtttgacaacctgctgcagcccattatagacacctgcaccaaagacgcc
atctctgctggtaagaactggatgttcaacaatgccaagactccacagcactgtgaactg
atgacatcacatcttcgcaaccgcatcactgctgatggagcgcattttgagctccgccta
catctcatctatttaaccaatgatgttctccatcactgtcaacggaagcagcagaaggat
ttgctggcggcactgcagaaagttgtggttcccatctactgcaccagctttctggccgta
gaggaagagaagcagcagaagataactcggttgttgcagctgtgggagaagaatgggtac
tttgatgaggagactattcagcagctccagaatccagccctgggccttggccagtaccaa
gcgtctttgataacagagtatgctgcggtggtgcaaccaatccagctggccttccagcag
cagagccaggctttggatacccagcacgaagagtttattgccagcctgaaacagcagcag
cagccgcagctggcccctgtagcgcagctagctcccgtagctgagcatgaaaaggccatg
cctatgaccacaaaagctggggatgtgaagcctaccatgtcagtacttcttccaggggag
tttgatggggcttcatccaggccccaggacccgagcaaccccagtggaccttcagatatc
acctctaacaagcctgcgtggtatgaaactcaacacttgggcccctggaaccccaaccag
ccacctccctttgatccaaaccagcctccccctccctgccctccttggaacagccatgag
gggatgtggaatgagcagagggacccgggaaattggagtggaggtccacccagagaagga
ggtccctggagcggtcctggtggatctgaccaaggccctccatcttggaactcgtacgac
cagcagccgccatgggggaaccaacccgaccagcctccatggggccagagggagccccca
tttcctccacgcatgcagagacctccccatttcagagggcccttccctcctcaccagcag
ccacctcctttcaaccagcccccaccacctcatagtttcggacggtttccgccacgcttt
atgcaggatgactttcctcccagacaccactatgacaggccaccgtacaccccacaccac
tttgactatgctcaaggagattatcctgcagaaatgccaggtcctccccaccaccatccc
agtcagaggctccctcccccaggtatgggggctgatcatcctccctggggtggaagccag
cacccagagttttcgcaacccccacatggattcaatggccactcaccccaaatgcgtcat
cgtcagcagccagtgcaagatgaccccagtctggtgcctaatgtaccctactttgacctg
ccagctggtctcatggctccgctagtcaaacttgaggactatgattataaacctctggac
cctaaagacatccggctgccacctcccatgccacctagtgatcgcctgcttgctgctgtg
gaagctttctacagccctccatcccatgatcggcctaggaacagtgaaggctgggagcag
aacggcctgtatgagttcttcagggccaaaatgagagccaggagaaaaaagggccaggag
aaacgcaacagcggtcgtggagggagtcgctctagcagtcaatctcgcagcagagggaga
tcttcatctcgctcgagctctcgctcctcaaagtcctccaggtcccagtctcgctcatcc
cgctcccactcccgcagccgctctcgctcctactcgcgatccaggtccagaagtggatcc
agatcttctcggagtcgctctcgctccagatccagatcacattcacattcgcctgcaaag
agacgccatggtcccaaagtccagagctcttctcctgtctcatcgtcagtggtggctgcc
cctcccaccaaaccatgtgcagataacaggctaggggaagagaacaagggccaccagctg
ctaatgaagatgggctggagtggttcaggtggtttgggggccaaagaacagggcatccag
gaccctatcaaaggaggagacgtcagggataagtgggaccaatttaaaggtgtgggggtg
tcactggacgacccatatgagaactatcgcaggaacaagagctacaactttgtcgcccgt
atgaaggcacgagaggaagtcaatcgggaacctcaggatccccctccaactgattga
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