Pseudoliparis swirei (Mariana hadal snailfish): 130193886
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Entry
130193886 CDS
T09868
Symbol
tbc1d5
Name
(RefSeq) TBC1 domain family member 5 isoform X1
KO
K18469
TBC1 domain family member 5
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130193886 (tbc1d5)
Membrane trafficking [BR:
pswi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
130193886 (tbc1d5)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
RH_dom
Motif
Other DBs
NCBI-GeneID:
130193886
NCBI-ProteinID:
XP_056270672
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Position
1:12347824..12367837
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AA seq
870 aa
AA seq
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MQHPNFETRHPLQTDEQQETGFDPLNNFNKNRSRGSLDSSTYSQSQSTFLSYRKEWDDLF
LNSNYLARIRQAGVNGRLRSSRFRSVCWKLYLEALPEDKAQWINKTKEHRAHYEKIKETH
ITNPRKAASQQDLVVNNPLSQDEGSLWNRFFQDNDLKGMIKQDVLRTFPEIRYFQDDDVR
TKLTDILFCFARENEQLLYKQGMHELLAPIVFVLHCDNQAFQHASETASPSEEMKCLLNP
EFLEHDAYALFSQLMATAEPWFSSYEREVRKGKEEMLTSIPFARPQDSGPSVAIVTKVNR
IQDLLVKKNDIELHMHLNRLEIAPQIYGIRWVRLLFGREFPLQDLLVMWDALFADSVTLD
LVDYIFVAMLLYIRDALIASNFQTCLGLLMHYPPLGDINSLLQKALFLRDPKNYPRPVNY
QFQQNLDYYKTRGADLMNKTRSGPSPKTAPLNINKVSSSLLSFGRKLISPAISGGSGGIS
PINSEVHSSSSSASTSPATAPAPAPSHPLAGPPPGQAPLQPQSHAQTQHYRLLKSESMPV
HLSKDVVSGGVSQDSLPSQTHTDTQGQSSRAVSSSPSIESLSGGRPQSTASPPLPPSRGS
DVGTSSPPLSATKKESFFNISRSNSKTMGKKESEEDLEAQVSFLQGQINDLEAMSKYCAK
MMNTHICNIQEVILQEHLEKEDEVLVSLAGLKQVKDILQGALRFNQSQLEAEENEVISIA
DDHYTTMAAAETALRANKPGVDHQQQGNDRQSRDSDLDGRIVSTDEKEEEEEEQVSAPPE
QLVASCLGSEGKNWDDYILVCQDGDLAAAGGGGKAAAERTPPLRRLEPEGAAETFHDPLM
AGTASGSSSPDEGSTHSKDSDFTIVNPGDL
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaccctaatttcgagacccgccacccgctccagacagatgagcagcaggagacc
ggctttgacccgctcaataatttcaacaagaaccgcagcagaggctctcttgacagcagc
acttactcacagtctcagtcaaccttcctctcgtacaggaaagagtgggacgacttgttc
ctcaacagtaattacctggccaggattaggcaggcgggcgtcaatggtcgactgaggagc
agccgcttccggagcgtctgctggaagttgtatctcgaggctcttccagaagacaaggct
cagtggatcaacaagaccaaggagcaccgggcccactatgagaagatcaaagagacgcac
atcactaaccctcgcaaagctgcaagccagcaggatctggttgtcaacaacccgctgtca
caggatgaggggagcctgtggaacaggtttttccaagataacgatctgaaggggatgatc
aagcaggacgtgttgagaacgttcccagagattcgttacttccaggacgacgacgtgagg
accaagctgactgacattctcttctgctttgccagagaaaatgagcagttgctgtataaa
caggggatgcacgagctgctcgctcccatcgtgtttgtgctgcactgtgacaatcaagcc
ttccagcatgccagcgagaccgccagccccagtgaggagatgaagtgtctgttaaaccca
gagtttcttgagcatgatgcctatgccttgttctctcagctgatggcgacagcagagccg
tggttctccagctatgagagggaagtgagaaagggtaaggaggagatgctgaccagcatc
ccgttcgctcggccccaggactcggggccgtctgttgccatagtgaccaaagtcaaccgc
atccaggacctgctggtgaagaagaacgacattgaactgcacatgcacctcaaccggctg
gagattgccccgcaaatttatggcatccggtgggtacgtctgttattcggccgcgagttc
ccgctccaggacctgctggtgatgtgggacgccctctttgctgacagcgtcactctggac
ctggtcgactacatctttgtggctatgctgctctacatccgggacgctctcattgctagt
aacttccagacctgccttggcctgctcatgcactaccctccgctaggagacatcaactcc
ctgctacaaaaggctctattcctccgagatcccaaaaactatccgagaccggtcaactac
cagttccagcagaacctggattactacaaaacaaggggagctgaccttatgaacaagaca
cgctctggtcccagtcccaaaacggccccgctcaacatcaacaaggtctccagcagcctg
ctgagcttcggcaggaagctcatctcgccggcgatatcgggcgggtcaggcggcatctcg
ccaatcaacagcgaggtacattcctcctcgtcctccgcctcaacttcccccgcaacagca
ccagcgcccgccccgtctcacccgctggccgggcccccgccaggccaggccccactgcag
ccccagagccacgcccagactcagcactaccgcctgctcaagtccgagagcatgcccgta
cacctcagcaaagatgtagtttcaggtggagtctctcaggactctctcccatcccagact
cacactgacacacaaggccaaagctccagggcagttagctcctcccccagcatagaaagc
ctctctggtgggcggcctcagtccaccgcctccccgcctcttcccccctccagagggagt
gatgtcggcacttcatcgccgcccctttccgccaccaagaaggagtcgttcttcaacatc
tctcgctccaacagcaagaccatgggcaagaaggagtcggaggaggacctggaagctcag
gtatcattcctgcagggccagatcaacgatttagaggccatgagcaaatactgtgccaag
atgatgaacactcacatctgtaatatccaagaagtgattctccaagaacacctggagaaa
gaggatgaggtcctggtgtcactggctggactgaagcaggtcaaggacatccttcaggga
gcgctgcgcttcaaccaaagccagctggaggccgaggagaacgaggtgatctccatcgct
gacgatcactacaccaccatggccgccgctgagactgctctgagggccaacaaacccggc
gttgaccaccaacaacaaggaaacgacagacagagccgggactctgatctggacgggagg
atagtgagcacagatgagaaggaagaggaagaggaggagcaggtgtcggccccacccgag
caactggtggcgtcctgcctcggctccgagggtaagaactgggacgactacatcctcgtg
tgccaggacggagacctggctgctgccggtgggggaggaaaggctgcagccgagcgcacc
cctcccctcaggcgactggagcccgagggtgcggccgagaccttccatgaccccctgatg
gccggcaccgcctcgggctcttccagcccagacgagggctccacccacagcaaggactct
gacttcaccattgttaacccaggcgacctgtga
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