Pseudoliparis swirei (Mariana hadal snailfish): 130193927
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Entry
130193927 CDS
T09868
Name
(RefSeq) interferon regulatory factor 4-like
KO
K09445
interferon regulatory factor 4
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130193927
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
130193927
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Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
130193927
NCBI-ProteinID:
XP_056270731
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All DBs
Position
5:9663586..9670176
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AA seq
449 aa
AA seq
DB search
MNAEVDYGGSGSSGNGKLRQWLIEQVNCGTYPGLVWENDEKSIFRIPWKHAGKQDYNRDE
DAALFKAWALFKGKFREGVDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISDPYKVYR
IIPESAKKRPRLEDSPLSPVSYQVHSPYPAVQTQIPQYVPTPEGGWRDFCQEQASLPELP
FTHCPPRSLPWQGQSMENGYQLRASIYSYGPADIQPSAFYLDPSIRSAEALSDFRLHVSV
YFRDSLVREVTTSSPEGCHITPCSPEEKHYLPPGGPEVVPLPVESLSAQSRTEECPPSPP
ATLERGVLLWMGPDGLYARRLCQGRVYWQGGLSQYGDKPNTLEREVTCKLLHTQDYLTEI
QSYGLHGRPLPRFQVLLHFGDECLDLQRPRRTPTVQVEPLFARQLLYYAQQMGGHYFRSY
EHPGVTDHINTAEDYQRTITHHHSSSLQE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcagaggtggattacggaggctccgggagcagcgggaacgggaagctgcgccag
tggctcatcgagcaggtgaactgcggcacgtaccccggtctggtgtgggagaacgacgag
aagagcatcttccggataccgtggaaacacgccgggaaacaggactacaaccgcgacgag
gacgccgcgcttttcaaggcctgggcactgtttaaaggaaagttccgggagggggtcgac
aagccggacccgccgacctggaagactcgcctccgctgcgcgctcaacaagagcaatgac
tttgaggagcttgtggagagaagccagctggacatctcagacccatacaaagtgtaccgc
atcatccccgagagcgccaagaaaagacccagactcgaggacagtcctctgagtccagtg
agctaccaggtgcactccccctatcctgccgttcagacacagataccgcagtatgtgccc
acaccagagggtggctggagagatttctgtcaggagcaggcctccctgcctgagctgccc
ttcactcactgccccccccgcagcctgccatggcagggccagtccatggagaatggatac
caactcagagcctccatttactcgtacggtcctgctgacattcagccctcggctttctac
ctggaccccagcatccgatcagcggaggcgctctcagacttccgcctgcacgtttctgtg
tatttccgggactctctggtgagggaggtgaccacctccagtcccgagggctgccacatc
actccctgctcgccagaagagaagcactacctgcctcctggaggtcctgaggtggtcccc
ctgcctgtggagagtctctctgcccaaagcaggacagaggagtgtcccccgagtcccccg
gccaccctggagaggggcgtgttactgtggatgggcccagatggactctacgctcgcagg
ctgtgtcagggcagagtgtactggcagggaggactgtcccagtatggagacaagcccaac
acactggagagagaggtcacctgtaaactcctccacacacaggactacctgacagaaatc
cagagctacgggctccacggccggccgctgcctcgtttccaggtcctcttgcactttgga
gacgagtgtctggacctgcagaggccaagacggacccccacagtccaggtggagccactg
tttgccaggcagctcctgtactacgcccagcagatgggtggccactacttccgcagctac
gagcacccgggagtcacggaccacataaacaccgctgaggactaccagaggaccatcaca
catcaccacagcagcagcctgcaggagtga
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