Pseudoliparis swirei (Mariana hadal snailfish): 130193952
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Entry
130193952 CDS
T09868
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
130193952
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130193952
Ion channels [BR:
pswi04040
]
Ligand-gated channels
Serotonin (5-HT3)
130193952
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
130193952
NCBI-ProteinID:
XP_056270766
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Position
5:18431991..18445991
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AA seq
465 aa
AA seq
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MTGGKTACLVCICFSLLQGSVSALNCTSPTPDALFDALEKELFSRNLLRPVISFSDTLNI
SIDNIVVGIIGVNNKFPTLTNPLTQCMVWDIEGLSWDEKECGTTRVSVPREKLWIPDVFI
SEFMDEDNSPQSPYVYLYNTGRVYDDKPIRVVSSCQSEVYNFPFDIRNCSLTFGSYLHFA
EEIRMIQSRTDAEVMEESRQVTLTKGEWELADIEAAQTTREKPDGSYSLIKYYVILRRRS
TFYVVNLLIPSCFLVTMDLFSFMLPPDSAYRSSFKMTLILGYSIFLMMINNLLPALRKTP
LINVFVSISFTLMVTSLLETMFIVNFQNRTSNKVTVPHWLRVLVLRYLAVAVCLPPKKKS
NCIPVSLHSPATAMNTSTISSRDLQSDSGATPSVKPLLGLTLDKLRSMSRDLTAIRLQMH
FQEKNNLQEWKLVGIVIDRLLFYLYIVFICLSFITITCIWINMRV
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacagggggaaagacagcctgccttgtttgcatctgtttttcactacttcaaggttct
gtttcagccttaaactgcaccagcccaactcctgatgccttgtttgatgctctcgagaag
gaactgttttctagaaacctactgcgacctgtaataagcttttcagatacattgaatata
tccattgataatattgtggtgggaataataggagtgaacaacaagtttccgactttgact
aatcctttgactcaatgtatggtttgggacatcgaaggactgagctgggatgagaaggaa
tgtggaactacaagagtctctgtccctcgagaaaagctttggatcccagacgtctttatc
tcagagttcatggacgaggacaactctccccaatctccctatgtctacttatacaacaca
ggtcgtgtttatgacgataagccgatcagagtggtcagttcctgccaatcggaagtctac
aatttccccttcgatatccgaaactgctctctgacctttggatcttatttacactttgct
gaagagatcagaatgattcaaagccgcacagatgcagaggtcatggaggagtccagacaa
gtgacgttgactaaaggggagtgggagcttgcagatatcgaagcagctcaaactacccgg
gagaaacctgatggaagctactctttgattaaatactatgtaattctgagacgtaggtca
accttctatgtggtgaacctgctgatccccagctgcttcctcgtcacaatggacctcttc
agcttcatgctgcctcctgatagtgcgtaccgttcctcctttaagatgacccttatcctg
ggctactccatcttcctgatgatgataaacaacctgcttcctgccctcaggaagacacct
ctcattaacgtttttgtctccatcagtttcactctgatggtgaccagcctgttggagacc
atgtttatcgttaatttccagaacagaaccagcaacaaagtcacggtgcctcactggctc
cgtgtccttgtgctacgatatctagctgttgctgtttgtctccctccaaaaaagaagagc
aactgcatcccagtctcccttcattcacctgctacagcaatgaataccagcacaatatct
tcaagagatcttcagagcgactctggcgcgacaccttcagtgaaacctctgctgggactg
accctggataagctgaggagtatgagtagagatctcacggccatccgcctccagatgcac
ttccaggagaaaaacaacttacaagaatggaaactggtcgggatagtcattgaccgtctg
ctgttctacttgtacattgtctttatctgtctcagctttatcaccatcacatgtatctgg
attaacatgagagtataa
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