Pseudoliparis swirei (Mariana hadal snailfish): 130194002
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Entry
130194002 CDS
T09868
Symbol
tmco1
Name
(RefSeq) calcium load-activated calcium channel
KO
K21891
calcium load-activated calcium channel
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130194002 (tmco1)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswi02000
]
130194002 (tmco1)
Membrane trafficking [BR:
pswi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Multi-pass translocon (MPT) complex
130194002 (tmco1)
Transporters [BR:
pswi02000
]
Other transporters
Pores ion channels [TC:
1
]
130194002 (tmco1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMC3_TMCO1
DUF2368
DUF6809
Vpu
Exonuc_VII_L
DUF5683
DSHCT
DUF4257
Piezo_TM1-24
Peptidase_S49_N
DLH
Nucleoside_tran
DivIC
Motif
Other DBs
NCBI-GeneID:
130194002
NCBI-ProteinID:
XP_056270841
LinkDB
All DBs
Position
5:7223585..7226839
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AA seq
185 aa
AA seq
DB search
MFADTILIVFISICTALLAEAITWVLVYRTEKYKGLKAEVEKQSKKLEKKKETITESAGR
QQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVARLPFVPLS
YIQGLSHRNLLGEDYTDCSFIFLYILCTMSIRQNIQKMLGLAPSRAATKQAGGFLGPPPQ
AAKFS
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccgatactattctcatcgtgtttatctccatttgcacagcgctgttggccgaa
gcgattacctgggttttagtgtatcgcactgaaaagtacaaggggctcaaggctgaagtg
gaaaaacaaagcaaaaaactggagaagaaaaaggaaaccatcacggaatctgcaggacgt
caacagaagaagaaaattgaacgacaagaagagaaactgaagaacaacaacagagacttg
tctatggtgcgcatgaagtccatgttcgccatcggcttctgcttcacagctttgatgggc
atgttcaactccatcttcgacggaagagtcgtggccaggttgccattcgtgccgctctcc
tacatccagggcctgtctcatcgcaacctgctgggcgaggattacacagactgctccttt
atcttcctctacatcctctgcaccatgtccatcagacagaacatccagaagatgctcggc
ctcgcgccctccagagctgcaaccaaacaggctggaggcttcctggggcctcctccccaa
gcagccaagttttcctga
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