Pseudoliparis swirei (Mariana hadal snailfish): 130194015
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Entry
130194015 CDS
T09868
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
130194015
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130194015
Ion channels [BR:
pswi04040
]
Ligand-gated channels
Serotonin (5-HT3)
130194015
SSDB
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Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
FAM70
Motif
Other DBs
NCBI-GeneID:
130194015
NCBI-ProteinID:
XP_056270857
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All DBs
Position
5:18457568..18467352
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AA seq
476 aa
AA seq
DB search
MTEVKPAELIFLCFMLLHGFVATLNCTSPTPESLFAALETNVFTKKLLRPVKNFSTPINI
TVGITVVGILGVDEQSQVLTTMLWQVLEWEIEGLSWDEEECGSKRVSVPRELLWVPDIHI
AEFMDEDKSPKPPYVYLDNTGHVYDDKPVRVVSSCRLVIYTFPFDVQDCLLTYGSYLHVA
ADIRLIQGPTAEEILAESREVLETNGEWKLEDIRVAPSTLTLDERSFSQIKYHIILRRRS
ILYVVNLLIPSCFLITVDLFSFMLPTDSVDRSSFKMTLILGYSVFLLIMNDLLPITGETP
LINVFFSISLALMVTSLLETMFIVNIQNSTSNTIMVPHWLSVLVLQYLAVIVLLPRKRVV
TRATYFSNTAARAQNFSINSISAFHLQHASGDDSLAKPPMTPPEPALDELRKLSRDLSAI
RLHIEKHDQGCKTMDEWRMIGKVLNRLLFGMYIVFITVSFITIICIWNLSKTPQEG
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggtgaaacctgctgagctgatctttctctgtttcatgctgcttcacggtttt
gtagcaacattaaattgcacaagcccaactcctgaatctttgtttgctgcacttgagaca
aatgtattcactaaaaaactactgcgacctgtgaaaaacttttcaactccaattaacata
accgttggtatcactgtggtgggaattttaggagtggatgaacaatcccaggtcctgaca
acaatgctatggcaagtcctagagtgggaaattgagggactgagctgggatgaggaggaa
tgtggctctaagagagtctctgtccctcgagaactgctttgggtcccagatatccatatc
gcagagttcatggacgaggacaaatcccccaaacctccctatgtctacttagacaacaca
ggtcatgtttatgatgataagccggtcagagtggtcagctcctgccgactagtaatctac
acgttccccttcgatgtccaagactgcttgctgacctatggatcctatctacacgttgcg
gcagacataaggctgattcagggccccacagccgaagagatactggcggagtcgcgagag
gtgttggagaccaatggggagtggaagcttgaagatatccgtgtagctccttctaccctg
acattagatgagagaagtttctctcagatcaaataccatataattctgagacgtaggtca
atcctctatgtggtgaacctgctgatccccagctgcttcctcatcacagtggacctcttc
agcttcatgctgcctactgatagtgtggaccgttcctccttcaagatgaccctcatcctg
ggctactccgtcttcctgctcatcatgaacgacctgctgcccatcaccggggagacacct
ctcatcaacgttttcttctccatcagtctcgctctgatggtgaccagcctgttggagacc
atgttcatcgttaatatccagaacagcaccagcaacacaatcatggtgcctcactggctc
agtgtactcgtgctacaatatctcgctgttattgttttgctccctcgaaagagagtcgtc
acccgagccacttacttctccaacacagctgccagagcacagaatttcagcatcaacagc
atctcagcatttcatcttcagcacgcctctggtgatgactctctagcgaaacccccgatg
acgcctccggagccggccctggatgagctgaggaaactgagcagagacctctcggccatc
cgcctccacatagagaaacacgatcaggggtgcaaaaccatggatgaatggcgaatgatc
ggcaaagtactcaaccggctgctgttcggcatgtacatagtcttcatcactgtcagcttc
atcaccatcatatgtatctggaacttgagcaagacaccacaagagggttga
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