Pseudoliparis swirei (Mariana hadal snailfish): 130194050
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Entry
130194050 CDS
T09868
Name
(RefSeq) ras-related protein Rab-11B-like
KO
K07905
Ras-related protein Rab-11B
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130194050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130194050
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pswi04147
]
130194050
04031 GTP-binding proteins [BR:
pswi04031
]
130194050
Membrane trafficking [BR:
pswi04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
130194050
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130194050
Exosomal proteins of other body fluids (saliva and urine)
130194050
Exosomal proteins of colorectal cancer cells
130194050
GTP-binding proteins [BR:
pswi04031
]
Small (monomeric) G-proteins
Rab Family
Rab11/25 [OT]
130194050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
RsgA_GTPase
AAA_22
PduV-EutP
DUF3289
AAA_16
ABC_tran
NTPase_1
Gtr1_RagA
FAD-SLDH
TniB
AAA_24
Csa3_N
AAA_14
FeoB_N
YtzH
AAA_21
Motif
Other DBs
NCBI-GeneID:
130194050
NCBI-ProteinID:
XP_056270904
LinkDB
All DBs
Position
5:24719188..24723678
Genome browser
AA seq
218 aa
AA seq
DB search
MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENIARWLKELRDHADNNIVIM
QVGNKSDLRHLRAVPTDEARAFAEKNAISFIETSALDSTNVEEAFKNILTEIYRIVSQKQ
ISDRSAHDESPGNNVVDISLPPTTDGQRGGKLPCCQSL
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgggaacccgagacgacgaatacgactatttgttcaaagtcgtgctcatcggagactcc
ggcgtggggaagagtaacctgctgtcgcgcttcacgagaaatgagttcaacctggagagc
aagagcaccatcggggtggagttcgccacccgcagcatccaagtggacggcaagacgata
aaggctcagatttgggacacggctggacaggaacgctacagagcgatcacctcggcgtat
taccggggggccgtcggagcgctcctggtgtacgacatcgccaagcacctgacgtacgag
aacatcgcgcgctggctgaaggagctgagggaccacgccgacaacaacatcgtcatcatg
caggtcgggaacaagagcgacctccgccacctcagggccgtgcccaccgacgaggctcgc
gccttcgcagaaaagaacgctatctcatttattgaaacctccgccttggactccactaat
gtagaagaagcctttaagaacattctcacagaaatctaccgcattgtgtctcagaagcaa
atatcggaccgatctgcacacgacgagtctcccggcaacaacgtagtggacataagcctc
cccccgaccacggacggccagaggggcggcaagctcccctgctgccagagcctgtga
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