Pseudoliparis swirei (Mariana hadal snailfish): 130194052
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Entry
130194052 CDS
T09868
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
130194052
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130194052
Ion channels [BR:
pswi04040
]
Ligand-gated channels
Serotonin (5-HT3)
130194052
SSDB
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
130194052
NCBI-ProteinID:
XP_056270906
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All DBs
Position
5:18410765..18415793
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AA seq
466 aa
AA seq
DB search
MTPKCLPPSVRPTVVVILILMPAVCGAIQVNCSEPNQPALLDALRPLFNLSAIRPIMNIT
TCTNVITYFTLYGILGVDEKAQLLVTYLWLHYWWMNEFVSWDPIQCGTDKIALPRTLFWV
PDIVINEFMDENSAPFVPYVYLHSNGKVHNAKPVKVVSSCNLDIYTFPFDIQNCTLTFSS
YIHIARDIKMFLGRSAEDITRISKDVITTMGEWELLDITSHKHDGGVHENQIDELIFNIR
VKRRATLYVVNLLIPSCFLITVDLFSFLLPPQNVDRSSFKMTLILGYTVFLLIMNDLLPI
TGSTIPLINVFFAICLALMVTSLLETILVTNLLCGSADFSPVPHWIQVLVLQILGPFVFL
PQKTKQPKNSEMKPSAVVAQPNTNDELLGEMGPVGEDNALQELKSLGKNLQAIRLQLEQQ
LGGSQGSEEWFQVGFIIDRLLFGLYILFVSVSFITIIIIWFKSYSQ
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgacgccaaagtgcctccctccatcagtcaggcccactgtggttgtgattctcattctt
atgcctgctgtgtgtggtgccatccaggtgaattgctctgagccgaaccaacccgccctg
ctggacgctttgcgtccactctttaacctgagcgccatacgacccattatgaacataaca
acctgcaccaacgtcatcacatacttcaccttgtatgggatactaggagtggatgaaaag
gctcaactcttggtcacttacctttggctacattattggtggatgaacgagtttgtcagc
tgggacccgatccaatgcggcactgacaagattgctcttcccagaacactgttttgggtg
ccagatattgttatcaatgaatttatggatgaaaacagcgccccctttgtcccatatgtg
tacctgcatagcaatggtaaagtgcacaacgcgaaaccagtgaaagtggtcagctcctgt
aacctcgatatctacaccttccccttcgatatacagaactgcactttgactttcagctcc
tacatacacattgcgagagacataaagatgttcctggggaggagtgctgaagacataaca
aggatctccaaggacgtgataaccaccatgggggagtgggagctgctggatatcacctcc
cacaaacatgatggtggagttcatgaaaatcagattgatgagcttatatttaatatcaga
gtaaagcgccgggccaccctctatgtggtgaacctgctgatccccagctgcttcctcatc
acagtggacctcttcagcttcctgctgcctccccagaacgtggaccgttcctccttcaag
atgaccctgatcctgggctacaccgtcttcctgctcatcatgaacgacctgctgcccatc
accggaagcaccatacctctcataaacgtgttcttcgctatctgcctggctctgatggtg
actagtctactggagactatcctcgtcaccaacctgctgtgtggctcggctgacttctct
cccgtccctcactggatccaagtgcttgttctgcaaattctgggccctttcgttttcctg
cctcagaagactaaacagccaaaaaactcagagatgaaacccagtgctgtggtggcacag
ccaaataccaatgatgagcttctaggggagatggggccggtgggggaggacaatgccctt
caagagctgaagagcctgggcaagaacctccaggccatccgcctccagctggagcagcag
cttggtggaagccagggctcagaggagtggttccaggtgggtttcatcatagaccgcctg
ctgtttggcctctacattctcttcgtatcagtcagcttcattaccatcatcattatctgg
ttcaaatcatacagtcagtag
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