Pseudoliparis swirei (Mariana hadal snailfish): 130194058
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Entry
130194058 CDS
T09868
Symbol
myo1f
Name
(RefSeq) unconventional myosin-If isoform X1
KO
K10356
myosin I
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
130194058 (myo1f)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pswi01009
]
130194058 (myo1f)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130194058 (myo1f)
03036 Chromosome and associated proteins [BR:
pswi03036
]
130194058 (myo1f)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130194058 (myo1f)
04147 Exosome [BR:
pswi04147
]
130194058 (myo1f)
Protein phosphatases and associated proteins [BR:
pswi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130194058 (myo1f)
Membrane trafficking [BR:
pswi04131
]
Endocytosis
Phagocytosis
Others
130194058 (myo1f)
Others
Actin-binding proteins
Myosins
130194058 (myo1f)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
130194058 (myo1f)
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
130194058 (myo1f)
Exosome [BR:
pswi04147
]
Exosomal proteins
Proteins found in most exosomes
130194058 (myo1f)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myosin_TH1
SH3_1
SH3_9
SH3_2
nSTAND3
IQ
NPHP3_N
Microtub_bd
ABC_tran
IQCJ-SCHIP1
AAA_16
RapZ-like_N
AAA_22
Amino_oxidase
Sigma54_activat
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
130194058
NCBI-ProteinID:
XP_056270912
LinkDB
All DBs
Position
5:complement(1681775..1702418)
Genome browser
AA seq
1089 aa
AA seq
DB search
MAKYHWQSQNVKQSGVDDMVLLSKITEDAIVDNLKKRYMDDFIFTYIGSVLISVNPFKQM
PYFTDREIDLYQGAAQYENPPHIYALSDTMYRNMMIDAENQCVIISGESGAGKTVAAKYI
MGYVSKVSGGGSKVQHVKDIILQSNPLLEAFGNAKTVRNNNSSRFGKYFEIQFSRGGEPD
GGKISNFLLEKTRVVSQNENERNFHIYYQMIEGANEQQKEGLGIMTPDYYCYLNQSGTYK
VDGTNDSNDFRETMEAMQVIGIPADVQAQVLQIVAGILHLGNISFIEAGNYGQVESTDLL
AFPAYLLGIDPGRLQDKLTGRKMESKWAGKNESINVTLNQEQATYTRDALAKALYARVFN
HLVEAINKAIQKPHEEFSIGVLDIYGFEIFQKNGFEQFCINFVNEKLQQIFIELTLKAEQ
EEYVQEGIKWTPIDYFNNKIVCDLIENKLNPPGIMSVLDDVCATMHAKGEGADGTLLQKL
QAAVGTHEHFNSWNSGFVIHHYAGKVSYNIAGFCERNRDVLFPDLIELMQSSEHNFICGL
FPENLNTDKKSRPTTASSKIKSQANDLVKTLMKCTPHYIRCIKPNETKRPKDWEESRGRH
QVEYLGLRENIRVRRAGFAYRRVFTKFLKRYAILTAETWPCWGGPEQQGVLHLLRSVNMD
NDQYQMGHTKVFVKNPESLFLLEEMRERKFDSFARIIQKSWRRYIARKKYEQMREEASDI
LHDSKERRRNSINRNFVGDYLGLEQRPELRQFLSKRERVDFADSVNKFDRRFKSIKRDLI
LTPKGIYLIGREKVKKGPEKGQIKEVLKRKLEFEGITGVSLSTRQDDFFILHESQYDSLL
ESNFKTEFLSLLLKRHEDVTKRKLTISFTDRLEFRVKKEGWGGGGCRVVVFQRGQGDLAQ
LKPGGKTLAITVGDGLPKSSKPSRRSAAQPQGGGRNNVSSRGCHNGAAHVSRALPNQPSN
VTHSSPHKHGRPPSTAPPKLGSQRTPRVQDHQQAHQGNMDFLNVPDQGMSGKQRKRSISQ
RPPPAPKPRPQPQGPRCRALYQYAGQDTDEISFEVNDVFELLNDDPSGWWTGRIQGKEGL
FPGNYVEKI
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagtaccactggcagagtcagaacgtgaagcagagcggtgtggacgacatggtg
ctgctgtccaagatcaccgaggacgccatcgtggacaacctgaagaagagatacatggac
gacttcatatttacttacatcggttccgtgttgatatcggtcaacccgttcaaacagatg
ccgtacttcaccgaccgggagatcgacctgtaccaaggagccgcccaatacgagaatccc
ccccacatctacgccctgtcggacaccatgtacaggaacatgatgatcgacgcggagaac
cagtgcgtcatcatcagcggcgagagcggcgccgggaagacggtggcggccaaatacatc
atgggttacgtctccaaggtatccggaggaggatccaaggttcagcacgtcaaggacatc
atcctgcagtccaaccctctgctggaagccttcggcaacgccaagaccgtccgcaacaac
aactccagtcgctttgggaaatactttgagattcagttcagcagaggaggagaaccggac
ggcgggaaaatctcaaacttcctcctggagaagacgagggtggtgagccagaacgagaac
gagaggaacttccacatttactatcagatgatagagggcgccaacgagcagcagaaggag
ggcctgggtatcatgaccccggactactactgctacctcaaccagtctgggacctacaag
gtggacgggaccaacgacagcaacgacttcagagagacgatggaagccatgcaggtgatc
gggatcccagcagacgtccaggctcaggtcctgcagatcgtggccggcatcctccacctg
ggaaacatcagcttcatcgaggccggcaactacgggcaggtggagagcaccgacttgctc
gccttccccgcctacctgctgggcatcgatcccggccgcctgcaggacaagctgaccggc
cggaagatggagtcaaagtgggcggggaagaacgagtccatcaacgtgaccctgaaccag
gagcaggccacctacaccagagacgccctggccaaggccctctacgccagagtcttcaac
cacctggtggaggccatcaataaagccatccagaaaccgcacgaagagttcagtatcgga
gtcctcgacatttacggctttgagatcttccagaaaaatggcttcgagcagttctgcatc
aacttcgtcaacgagaagctgcaacagatcttcattgagctgacgctgaaggccgagcag
gaggagtacgtccaggagggcatcaagtggactcccatcgactacttcaacaacaagatc
gtgtgcgacctcattgaaaataaactgaaccctcccggcatcatgagcgtgctggacgac
gtgtgcgccaccatgcacgccaaaggagaaggtgccgacggcactctgctgcagaagctg
caggccgcggtgggaacgcacgagcacttcaacagctggaactccggcttcgtcatccat
cactacgccggcaaggtgtcgtacaatatcgccggcttctgtgagcggaaccgggacgtg
ctgttccccgacctcatagagctcatgcagagcagcgaacataacttcatctgtggcttg
ttccccgaaaacctgaacacagataagaaaagccgtccgaccaccgccagctccaagatc
aagagtcaagccaacgaccttgtgaagacgctgatgaaatgcactccgcactacatccgc
tgcatcaaacccaacgagaccaagaggcccaaagactgggaggagagcagagggaggcat
caggtggaatatctcggactgcgggagaacatccgcgtgagaagagctggcttcgcgtac
cgcagagtcttcactaagtttctgaagaggtacgcgatcctgacggcggagacgtggccg
tgttgggggggtccggagcagcagggggtcctccacctcctccgctccgtcaacatggac
aacgaccagtaccagatggggcacaccaaggtcttcgtcaagaaccctgaatcgcttttc
ctgctggaggaaatgagggagaggaagtttgactcgttcgcccggatcattcagaaatcc
tggagaagatacatcgccagaaagaagtatgagcagatgagagaggaggcctccgacatc
ctgcacgactccaaggagcgcaggaggaacagcatcaacaggaacttcgtgggcgactac
ctgggcctggagcagcggcccgagctccggcagttcctctccaagagggaacgcgtcgac
ttcgccgattccgtcaacaagttcgatcgcaggttcaagtccatcaagagagacctgatc
cttacccccaagggcatctatctgattggtcgagagaaggtgaagaaaggacccgagaaa
ggacagataaaggaagtgctgaagaggaaactggagtttgaaggcatcaccggcgtctct
ctcagcacgagacaggacgacttcttcatcctccacgagtcccagtacgacagcctgctg
gagtccaacttcaagaccgagttcctcagtctgctgttgaagcgccacgaggacgtgacc
aagaggaaactgaccatctccttcaccgacaggttggagttcagggtgaagaaggagggc
tggggcggaggcggctgcagggtggtggtcttccagaggggccaaggggacctggcccag
ctcaagcctggagggaagaccctcgccatcacagtgggggacggtctacccaagtcctcc
aagccgagcaggaggagcgcggcacagcctcaaggcggaggaagaaataatgtgtccagc
cgcgggtgtcacaatggagcggcccacgtctccagagcgctccccaaccagccatcaaac
gtcacgcattcctcgccgcacaaacacgggcggcctcccagcacggcgccgcccaaactg
ggctcccagaggacccccagagtccaggaccaccaacaagcccaccaggggaacatggac
ttcctcaatgtgccggaccagggcatgtccgggaagcagaggaagaggagcatcagccag
cgacctcctccggcccccaagcctcggcctcagcctcagggcccccgctgccgggccctg
taccagtacgccggccaggacacggacgagatcagcttcgaggtcaacgacgtgttcgag
ctcctcaacgacgatccatcgggctggtggaccggcaggattcaaggaaaggaaggtctc
ttccccggaaactacgtggagaagatctga
DBGET
integrated database retrieval system
