KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130194103
Entry
130194103         CDS       T09868                                 
Symbol
kdm4b
Name
(RefSeq) lysine-specific demethylase 4B
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pswi03036]
    130194103 (kdm4b)
Enzymes [BR:pswi01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     130194103 (kdm4b)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     130194103 (kdm4b)
Chromosome and associated proteins [BR:pswi03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    130194103 (kdm4b)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 PHD DUF4537 DUF7141 Tudor_5 Tudor_3 53-BP1_Tudor
Other DBs
NCBI-GeneID: 130194103
NCBI-ProteinID: XP_056270970
LinkDB
Position
5:complement(485999..526733)
AA seq 929 aa
MSPIYGADVSGSIYDEDIHEWNIGHLNTLLDMVEQECGIVIEGVNTPYLYFGMWKTTFAW
HTEDMDLYSINYLHFGQSKSWYAIPPEHGKRLERLAKGFFPGSSQGCDAFLRHKMTLLSP
SILKKYGIPFDRITQNEGEFMVTFPYGYHAGFNHGFNCAESTNFATLRWVDYGKMATQCS
CRKDMVKISMDVFVRCLQPSRYELWKQGKDTTVLDHLKATGLSCPELESWREHRVHHRAN
VLRRALQKMKQVRRLKLEEVKVLAQEGIELNAAEYQRQVEEREAQRRQEREERLAKEAML
TLEAMEREEQQAAARGAEHPELQGLEAKLQSLTEDTAKKKPKRSKKMLSIHSAITGFEEA
FEQFATASAKNMVVDQEAELPLQGDLLDANFSEVKTEVKKSRRHPLSKPPMRSPLSILKQ
DPASDKELPSPTLLDSDLKKQEHLWQNHSSNFLAEKAFNAAVAALQPHCAICSLFCPYPQ
PHKDVLVANAPQHPAPPGLTRPLVPEMCFSVGASTTEPPPTNYHMGEDGTSPLLCCSSCH
VQVHARCYGVKPSSLSDSWTCSRCAAAAWTVECCLCNLRGGALKTTTDHRWVHVICAIAV
AEARFVNAVEREPVDVSGVPETRKSLKCVFCYGKTANRNRGACIQCSHENCATSFHVTCA
QIAGVVMTPADWPYVVSVSCHKHKRGASKSRASAKGPPSLTLGQRVIGRNSDGWYYHCTV
IGMATQTFYEVNFDDGSYCDNVHPENILSHDCLRTGPPEGGELIMVGTPEGEAVHASFVR
EHNHKSYQVEFQDQSQLILKHSEIHQLEHELPKRVRARTPTGTPRDLQLDLYGDLQLDLY
GDLQLDLYGDLYRDLYGDLQLDLYRDLYGDLYRDLYGDLQLDLTGPHWDLYGDLQLDLYR
DLYGDLYRDLYRDLYGDLQLDLHADAEQL
NT seq 2790 nt   +upstreamnt  +downstreamnt
atgtcccccatttatggggctgacgtcagcggctccatctatgacgaggacatccatgag
tggaacatcgggcacctgaacacgctgctggacatggtggagcaggagtgtggcatcgtg
atcgagggcgtcaacacgccgtacctgtacttcggcatgtggaagacgaccttcgcctgg
cacaccgaggacatggacctgtacagcatcaactacctgcacttcggacagtccaagtcc
tggtacgccatcccacctgagcacggcaagaggctggagcggctggccaaaggcttcttc
cccgggagctcccaaggctgtgacgccttccttcgccacaagatgacgctgttgtctccc
tccatcctgaagaaatacggcattccctttgaccggatcacccagaatgaaggagagttc
atggtcacctttccctacggataccacgccggcttcaaccacggcttcaactgtgccgag
tccaccaacttcgccacgctgcgctgggtcgactacggcaagatggccacgcagtgctcc
tgccgtaaagacatggtgaagatctccatggacgtgtttgtgcgctgcctgcagccgagc
cgctacgagctgtggaagcagggcaaagacaccacggtgctggaccacctgaaggccacc
gggctcagctgccccgagctggagagctggagggagcaccgggtccaccacagggccaac
gtcctgagaagggccctgcagaagatgaagcaggtgcgccgcctgaagctggaggaggtg
aaggtgttggcccaggagggcatcgagctgaacgctgccgagtaccagcggcaggtggag
gagcgcgaggcccagcggaggcaggagcgcgaggagcgcctggccaaggaggccatgctg
accctggaggccatggagcgcgaggagcagcaggcggcggcgcgaggagccgagcacccc
gagctccagggtctggaggccaaacttcagagcctgacggaggacacggcgaagaagaag
cccaagagatccaagaagatgttgagcatccacagcgccatcaccgggttcgaggaggcc
ttcgaacagtttgctactgccagcgccaagaacatggtcgtcgatcaggaggcggagctt
cccctgcagggcgacctcctggacgcgaacttctcggaggtgaagacggaggtgaagaag
agtcgccgccaccccctcagcaagccgcccatgcgctcccctctgtccatcctcaagcaa
gacccggccagcgacaaagagctgccctcccccacgttgctggacagtgacctgaagaag
caggagcacctgtggcagaaccactcatccaacttcctggcagagaaggccttcaatgct
gcagtggcagcgctacagccccactgcgccatctgctccctcttctgcccctaccctcag
ccacacaaagacgtgttggtagctaatgccccccagcatcctgccccccccgggctgacc
cggcccctggtccctgagatgtgcttcagcgttggagccagcaccaccgagccgccgccc
accaactaccacatgggggaggatggcaccagccccctgctgtgctgctcctcctgccac
gtgcaggtccacgcccgctgctacggcgtgaagcccagctccctgagcgactcctggacc
tgctccaggtgtgcagcagcagcctggaccgtggagtgttgtctctgtaacctgcgagga
ggagctctgaagaccaccacagaccaccggtgggtccatgtgatctgtgccatcgctgta
gctgaagctcgcttcgtgaacgccgtggagagagagccggtggacgtcagcggcgtgccg
gagacacgcaagagcctgaagtgcgtcttctgctacggaaagacggccaaccgtaaccgc
ggcgcctgcatccagtgctcccacgagaactgtgccacctccttccacgtcacctgcgcc
cagatcgccggagtcgtcatgacgccggccgactggccctacgtggtgtcggtcagctgc
cacaagcacaagagaggcgcctccaagtctcgggcctcggctaaaggccctcccagcctg
accctgggtcagcgggtcatcgggcgcaacagtgacggctggtactaccactgcaccgtc
atcggcatggcgacgcagaccttctacgaggtcaacttcgacgacggctcgtattgtgac
aacgtgcacccagaaaacatcttgagtcacgactgcttgcggaccggacctccggagggg
ggcgagctcatcatggtcggcacgccggagggcgaggcggtccacgcctccttcgtcagg
gagcacaaccacaagtcctaccaggttgagttccaggaccagagccagctgatcctgaag
cactctgagatccaccagctggagcacgagctgcccaagagggtccgagcccgaaccccc
accgggaccccacgggacctccagctggacctctacggggacctccagctggacctctac
ggggacctccagctggacctctacggggacctctaccgggacctctacggggacctccag
ctggacctctaccgggacctctacggggacctctaccgggacctctacggggacctccag
ctggacctcacgggacctcactgggacctctacggggacctccagctggacctctaccgg
gacctctacggggatctctaccgggacctctaccgggacctctacggggacctccagctg
gacctccatgctgatgcggagcagctgtga

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