Pseudoliparis swirei (Mariana hadal snailfish): 130194117
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Entry
130194117 CDS
T09868
Name
(RefSeq) excitatory amino acid transporter 3-like
KO
K05612
solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter), member 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
130194117
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswi02000
]
130194117
Transporters [BR:
pswi02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
130194117
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Gene cluster
GFIT
Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
130194117
NCBI-ProteinID:
XP_056270984
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Position
5:complement(1496793..1508443)
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AA seq
454 aa
AA seq
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MSQGPKQLQRLQGPKQLQGPKQLQRLQRPRQLQRLRGPKQLQPCDKLSALKEAERTTLGF
CMKTFRPYSEESHYYLRLPGELLMASLKTVSLPLMVTSVILGTVNLRAPMKIALRAAFIF
VLTTVVAVLIGLMLVLVIKPGAAYTEDQDDQQAEVEFTFRDFFMDLNDTVVQLEGHYVDG
TNTLGLIVSALLTGVALKSMGESGQVIVDHMKTVNVLCKEVVKLIKWFWPFGLSSIIASN
IFAVYDLETIHKLGEFVLVVFVGLLIHGCVALPALYCLLVRCNPWHCIKGVHLALLTALM
SSSSSATAPVTLRCCEEGNDVDPRVARFLLPIATTVNKDGSALYDVVAVVFLAQLSGIEL
SLSRIIEISLSAAGVPATGAVATGAVTTLFVLEVAGLPTENASILFAVEWILDRLNTVVN
VWSDCVCVKIVAALSKRELEDEQQGEQVARADAE
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagggccgaagcagcttcagaggcttcaggggccgaagcagcttcaggggccg
aagcagcttcagaggcttcagaggccgaggcagcttcagaggcttcgggggccgaagcag
cttcagccctgcgacaagctcagtgctcttaaagaggccgagcgcaccacattgggcttc
tgcatgaagacgttccgcccgtactcagaagagagccactactacctccgcctaccagga
gagctgctgatggcgagccttaagactgtctctcttcctcttatggtgacgagtgtcatt
ttaggaacagtaaacctgagagcgcccatgaagatcgctctgcgtgcggccttcatcttt
gtcctcacgacagttgtcgctgtgctgatagggttgatgctggttctggtgatcaagcct
ggggcggcttacaccgaggaccaagacgatcagcaggcggaggtagagttcaccttcagg
gacttcttcatggatctcaatgacactgttgtgcaactggagggtcactatgtggacggc
accaacacgctgggcctgatcgtgtccgcccttttgactggagtggccctgaagagcatg
ggggaaagtggccaggtcatcgtggaccacatgaagaccgtcaacgtgctgtgcaaagaa
gtggtcaaattaatcaagtggttctggccatttggattgagctccataattgccagcaat
atctttgcggtgtacgatctggagaccatccataaactgggagagtttgtgttggtggtt
tttgtcggactcctcatccacgggtgcgtcgctctcccggccttgtactgcctcctggtg
agatgcaacccgtggcattgcatcaagggcgttcaccttgccttattgactgctctgatg
agctcctccagctcggccacggcgcccgtcactctgcgatgctgtgaggagggaaacgac
gtggacccgcgagtcgcccgcttcttgttgcccatcgcgaccaccgtcaacaaggacggg
tcggccctttacgacgtggtcgccgtcgtgttcctcgcccagctcagcggcatcgaactg
agcttgagcaggatcattgaaatcagcctcagcgcagcaggggtcccggcgacgggagcc
gtggcgacgggagccgtgaccacgctcttcgttctggaggtggcgggcttacccacggag
aacgcctccatcttgttcgccgtggaatggatcctagaccgcctcaacacggtcgttaat
gtctggtcggactgcgtctgcgtgaaaattgtcgccgccctgtccaaaagggaactggag
gacgaacagcaaggagagcaggtggcgagagcagacgccgagtga
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