Pseudoliparis swirei (Mariana hadal snailfish): 130194138
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Entry
130194138 CDS
T09868
Symbol
hoxa1a
Name
(RefSeq) homeobox protein Hox-A1a
KO
K09301
homeobox protein HoxA/B/D1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130194138 (hoxa1a)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
130194138 (hoxa1a)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7255
Motif
Other DBs
NCBI-GeneID:
130194138
NCBI-ProteinID:
XP_056271009
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All DBs
Position
1:complement(12614526..12615889)
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AA seq
324 aa
AA seq
DB search
MSSFLDYSVMSGEGGSCSVRAFHSDHGITTFQSCAVTVNNCGTDDRFMGSRASPDGVPHQ
PGSYQSNANTLGLAYGAHPACSSSFGPQSFCATYNHYALNQEVDSTAGFPQCSPLMYSGN
ISSSMVAQHRQGYSAAPLGQLQYAHAAYGGGHEQAAPFPRCSNSLSPLQAAHLDACCSPL
SEGASSAQTFDWMKVKRNPPKTGRSGEYGYGGQLNTVRTNFTTKQLTELEKEFHFNKYLT
RARRVEIAAALQLNETQVKIWFQNRRMKQKKREKEGLLSAKAPTSDPRESSQEKIEDGAS
EKSISAPSTPSPTSSTVSDPYSSN
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcttcttagactactcggtgatgagcggtgaaggtggctcatgctctgtcagg
gctttccactcggaccacgggattacaactttccagtcctgtgcagtcactgtcaacaat
tgcgggactgatgatcgcttcatggggagcagggcttcacctgacggcgtccctcatcag
ccggggtcataccagtctaatgcgaacactctgggtctcgcctatggggcccatccggcc
tgcagctccagctttggaccccaaagtttctgtgctacgtataaccattacgcgctcaac
caggaagtagactccaccgcgggattcccccagtgcagcccactaatgtactcgggtaac
atttcctcctccatggtcgctcagcatcgccaaggttacagtgccgcccccttgggtcag
ctgcagtatgcccacgctgcctacggcggcgggcacgagcaagcagccccttttcctcgg
tgctccaactcgctgtcaccactgcaggcagctcacctggacgcttgctgttcacctctg
tctgagggcgcatcttctgcacagaccttcgactggatgaaagtcaagaggaaccctcca
aaaacaggtaggtctggggagtacggttatgggggtcagctgaacacggtgcgaaccaac
ttcaccaccaagcagctgacggagctggaaaaggagttccacttcaacaagtacctgaca
cgtgcgcggcgcgttgagatcgcagctgcgctgcagctgaatgagactcaagtgaaaatc
tggttccagaaccggaggatgaagcagaagaagagagagaaagaaggtctgctgtcggcc
aaagcgccaacctcagatccgagagagagcagtcaagagaaaatagaggatggagcatca
gagaagtccatttcagccccctctactccgtccccaacatcctccacggtgtctgatcct
tactcttccaactaa
DBGET
integrated database retrieval system
