Pseudoliparis swirei (Mariana hadal snailfish): 130194186
Help
Entry
130194186 CDS
T09868
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130194186 (hps3)
Membrane trafficking [BR:
pswi04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
130194186 (hps3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Pepco
Motif
Other DBs
NCBI-GeneID:
130194186
NCBI-ProteinID:
XP_056271052
LinkDB
All DBs
Position
5:11529489..11547861
Genome browser
AA seq
1034 aa
AA seq
DB search
MVHVYNCHPFSSQQIVKVEQEPGLICCGGGALFVVAAGGCKVDAYSVEKEGCPLICRFAT
MGTVKNIQHSKIGDYLVTIEEKNSATYLRAYTNWRHQAEGKARVGVRLLGHLLGGASVRG
GVQMEIIEIPLSERPVAVACCSVTGDLVVGCESTLVLFALRRQSQLSLNESLQSSSLGQD
QIICSNQNFLDFERLVVLHLPKIKPKQVALCGRYVAVQAELEVLVLKLDISSESKTLEES
SDTKKTDHLEDQADFQVLLRHQELLGDRAKNCDIPVRVEKTGLEDSTGQCTLSYVLFRRF
TPDFFQGCSVEETQLHSLQLYPLFTGNQSESLEEPLCIFCFFSLPSAGYLYSLKGGVELL
SAYQYPEKVLKAVLTDHLLHVITKSALQCFTVRCAAVAARMEDPYIDTTMKACPPCSLEV
CALRLQLFIGLRSVCVSGRHVILLSTADTEAPEESERTPQRRCLSRKWTISSPKETSTAG
HGWNLYVVDTVSPLTLYQEMVEYSERYAETNPQAQSLRHLLSEAHLLIRSALLQTSEQQP
RVEGDPALSLQTDADGPAEKQTAVQTDRQELEEALRQNCAQLGDCFSRASQKDCHLALPY
YRMSDLSVTEITARNRPLPSSPHSYGPGFLFYLKHYLFEETEQTLSREAADEVIEIFSQS
EPSQLVSVCASPSLINISPAQTLQILQHLEDKAGVSVPLTTTMATMMLRLDDMPQYTHLM
ERHAEMLLVYGFIEEPRLLLHGGGGGQHTQTRPTALTRQLAKSQPGLLVAAVVALHENNK
VQLEQADHIFKELGCENCLQVDFWEAMLMASSQETLIQELLFRVASVYIDRLTSTTSDTH
SNKPHAPSRRRPLKSADDLINSCSHYGALYPWLTVLNPAHTTSSQHQEALYKLQALLCGP
SLSVGSIMPLMERLSEETLWGFSLHLLCATRAGQYDSSIEKLLDRCPQAIIAYANHQLQD
KHMALWWQKLLPELCNRTRAAADNSILLAALKETLVVVAMETSPTEFLELMPEDGTASYF
LPHLLTCSQRHMQA
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggtgcatgtctacaactgccatcctttctcctcacagcagatagtaaaggtggagcag
gagcctggactgatctgctgtggaggtggagccctgttcgtggtggctgctggaggatgc
aaggtggatgcctacagtgtggagaaggagggctgccctctcatctgtcgctttgccacc
atgggcactgtgaagaacatccagcacagcaagataggagattacctggtgacaatcgag
gagaaaaacagcgccacctacctgagagcctacaccaactggcgccatcaggcggaggga
aaggcccgtgtcggggtgcgcttgttgggccacctgctgggtggggcgtctgtgcgtggc
ggagtgcagatggagatcattgagatccctctgtcagagcgccctgttgctgtggcgtgt
tgctcagtaacaggagaccttgtggtcggctgtgagagcacgctggttctgtttgctttg
aggagacagagccagctgagcctgaatgaaagtctgcagagttccagtctgggtcaagat
cagatcatatgttcaaaccagaattttcttgattttgaacgcttagttgtcctgcatctt
ccaaaaatcaagccgaaacaggtggcgctttgtggaagatatgtggcagttcaggcggag
ctggaagtgctggttttaaaactggacatatcctctgaatctaaaaccctggaagaatca
tcggacacaaagaaaacagatcatctggaagaccaggcagactttcaggtccttctgaga
caccaggagttgctcggtgatcgagctaaaaactgtgacattcctgttcgcgtcgaaaag
accggcctggaggacagcacagggcaatgcactctgtcttatgttctcttcaggcgtttt
actccagacttcttccagggctgcagtgtggaggagactcaactccactctctacagctc
tacccgctgttcaccggtaaccagtcagaatctctggaagaaccattgtgcatattctgc
ttcttctctctcccgtccgctggctacctgtacagtctgaagggcggcgtcgagctcctc
tcggcctatcagtatccagagaaggtcctgaaggcggtgctaacagaccacctgttgcac
gtcataacaaagagtgcattgcagtgtttcaccgtgcgctgtgcggcagtagcagccagg
atggaagacccctacatcgataccaccatgaaggcctgtccaccctgcagcctggaggtg
tgtgcgctcaggttgcagctgttcattggtctgcgctcagtgtgtgtctccggccgccat
gttatcctgctctccaccgccgacacggaggcaccagaggaatcagaacgcaccccacaa
cgcagatgcctgagcaggaagtggacaatctcttcccccaaagaaaccagcactgcagga
cacggatggaacctctatgtggtcgacactgtctccccactcactctctaccaagagatg
gtggaatacagcgagcggtacgcggagaccaacccacaggctcaaagtcttcggcacctg
ctgagcgaagctcacctcctcatccgcagcgccttactccaaacatcagagcagcaacca
cgcgttgagggagaccccgcgctgtctctgcagacagatgcagatggaccagctgagaag
cagacagctgtacagacagacagacaagaactggaggaggcactccgacaaaactgtgca
cagctgggagactgtttcagcagggcgagtcagaaggactgccacctggctctgccgtac
tacaggatgtctgatctgtcagtcacagagatcacggccaggaaccggccgcttcccagc
agccctcactcctacggccccgggttcctcttctacctgaagcattacctgtttgaagaa
acagagcagactctcagtcgggaggcagctgatgaggtcatagagattttcagccaatcc
gagccctcacagcttgtcagtgtgtgtgccagcccgtccctgataaacatcagtcctgcc
cagaccctgcaaatcctacaacatctggaagacaaagctggcgtctctgttcctttgaca
accaccatggcaaccatgatgctgcgtttggacgacatgccacagtacacacatctgatg
gaaagacacgctgagatgctgctggtctacgggttcattgaggagccaagactgttgctg
catggcggcggtggaggccagcacacccaaacccgtcccacggcgttgacccgccaattg
gcgaagtcccaaccaggactgcttgtggccgccgtggtggctttacatgaaaacaacaaa
gttcagctggagcaggctgatcacatcttcaaggagctgggctgtgagaactgcttacag
gtggatttctgggaggcgatgctcatggcctcctcacaggaaactctcatccaggaactt
ctgttccgagtggcgtctgtctacatcgaccgactgacgagtacaacctcggatacacac
agcaacaaaccacacgcaccttcaagacgcaggccactgaagagtgctgacgatctgata
aactcgtgctcccattacggcgctctctacccgtggctcactgttctcaatccagcgcac
accaccagctctcaacaccaggaggcgctatacaaactgcaggctctcctgtgtggtccg
tccctgtcagtgggctccatcatgcccctgatggagcgtctttcagaggaaaccttatgg
ggcttcagcctgcacctcctctgtgctaccagggcgggtcaatatgacagcagcattgaa
aagctgctggaccgatgtcctcaggccatcatagcctacgctaaccaccagttacaagac
aagcatatggcgttatggtggcagaagctgctcccagagctttgtaacaggacgagagct
gccgcagacaacagcatcctattggccgctctcaaagagacgctggtcgtggttgccatg
gagacgagtccaacagagtttctggaactgatgcctgaggatggtaccgcctcatacttc
ctgcctcacttgttgacatgtagccagagacacatgcaggcctga
DBGET
integrated database retrieval system
