Pseudoliparis swirei (Mariana hadal snailfish): 130194217
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Entry
130194217 CDS
T09868
Symbol
tbc1d23
Name
(RefSeq) TBC1 domain family member 23 isoform X1
KO
K22555
TBC1 domain family member 23
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130194217 (tbc1d23)
Membrane trafficking [BR:
pswi04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
130194217 (tbc1d23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBC1D23_C
RabGAP-TBC
Rhodanese
RabGap-TBC_2
IL8
Motif
Other DBs
NCBI-GeneID:
130194217
NCBI-ProteinID:
XP_056271095
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All DBs
Position
5:27404476..27419369
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AA seq
693 aa
AA seq
DB search
MADAAEEALQGSWDQDLAEALDSGGSDMEMERSVVQESSAQHRAKMWKIALNVSGKGDSL
SPWDGVLDLPEQSLIHQRSEQLIDQLEVSEEERRGSVCDVESVISFYCKSRNICFSPETS
WPHLLKPLLGLRLPRSDLYNCFYAVMNKHIPRDCVPSGRPFHLYRLLLQYHEPELCSFLD
TKKITPDSYAINWMGSLFSSHCPPDVTRALWDCYLRQADPFLIFFLMLIILVNAKEAILS
QEGDSREDIIKLLEESPSHLEAEDVEDLFSLAQYYQSKTPLSLRKMNQNLFGCSLVALKE
EDTDLSQALCLPVSVPEILQANQLQQDGVRFFVVDCRPAEQYNAGHLSTAFHLDSDLMLQ
NPSEFSLSVKSLLEAQKQSLESGSIASGEHLCFMGSGREEEDMYMNMVLAHFLQKNKEYV
SIAKGGFMALQKHLVDMNIEGLDSSYLHWIVSTSGSHSSLSSTDGDSLSPGDGKGVKSLV
NKMTFAFKSKSVNVKEKMISFIENTSTPVDRMAFNLSWPEKVIPDRHVSSSDRVGKAYRG
VKPVFSIGDEEEYDTDEIDSSSMSDDDRKEIVGIQTWTNKADVKHHIPCNEVKETGHMFP
SHLLITATHMYCLREIASRKGFAYIQSRQALNSVVKITSKKKHPELITFKFGTNNSAGVE
ISAVERYLIPNAGDATKVIKQQIMKVLDALESS
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgccgcggaggaagctcttcagggcagctgggaccaggacctcgccgaggct
ctggactcgggaggctccgacatggagatggagaggagcgtcgtgcaggagagctcggcc
caacaccgggccaagatgtggaagatcgccctcaacgtctccggcaaaggggacagcttg
tctccctgggacggcgtcctggatttaccggagcagagcctcatccaccagcgcagtgaa
cagctgatcgaccagctggaggtctcggaggaggagcgtcggggctcggtctgcgacgtg
gagtccgtcatcagcttctactgcaagtccaggaacatctgcttcagcccggagaccagc
tggccgcacctgctgaagccgctgctggggctccggctgccccgcagcgacctctacaac
tgcttctacgccgtcatgaacaagcacatccccagggactgcgtgccgagcggccggccc
ttccacctgtaccgactgctgctgcaataccacgagccggagctctgcagcttcctggac
accaagaagatcacgcccgactcctacgccatcaactggatgggcagcctgttctccagc
cactgcccccccgacgtcacccgggccctgtgggactgctacctccggcaggccgacccc
ttcctcatcttcttcctcatgctcatcatcctcgtcaacgccaaggaggccattctttca
caagaaggagatagcagagaggacatcatcaaactgctggaagagtctccttctcacctg
gaggccgaggacgtggaggacctgttctccctggctcagtactaccagagcaaaacccct
ctgtccctcaggaagatgaaccagaacctgtttggctgcagcctggtggctctgaaggag
gaggacactgatctgagtcaagcgctgtgtctccccgtgtccgtccccgagatcctgcag
gccaaccagctgcagcaggacggcgtgcggttcttcgtggtggactgtcggcctgcggag
cagtacaacgccggccacctgtccacagccttccacctggactccgacctgatgctccag
aacccgtctgagttctccctctccgtgaagtccctgctggaggcccagaagcagtcattg
gagtcgggctccatcgccagcggggagcacctgtgcttcatgggcagcgggcgggaggag
gaggacatgtacatgaacatggtgctggcccacttcctacagaaaaacaaagagtacgtc
agcatcgccaaaggaggattcatggccctccagaagcacctggtggacatgaacattgag
ggtctggactcctcgtaccttcactggatcgttagcacgtctggatctcacagcagcctc
agctccaccgacggagactctctgagccccggagatggaaaaggagtcaaatctctggtg
aacaagatgaccttcgccttcaagtccaagtctgtgaacgtgaaggagaagatgatcagc
ttcatcgagaacacctccacccccgtagacagaatggctttcaatctgtcgtggccagag
aaggtgattccagatcgacatgtgagcagcagcgaccgggttggcaaagcctaccgaggg
gtgaagcccgtcttcagcatcggtgatgaggaggaatacgatacagatgagatcgacagc
tcctccatgtcggacgatgacaggaaggagatcgtcggcatccagacgtggaccaacaag
gccgacgtgaagcaccacatcccgtgtaacgaggtgaaggagacgggtcacatgttcccc
agccacttgttgatcaccgccactcacatgtactgcctgagggagatcgcctccaggaaa
ggcttcgcctacatccagtccagacaggcgctgaactccgtggtgaagatcacgtccaag
aagaagcacccggaactcatcaccttcaagttcggcaccaacaactcggccggggtcgag
atctcagcggtggagaggtatctgatccccaacgcgggcgacgccacgaaggtcatcaag
cagcagatcatgaaggtcctggacgctctggagagctcgtag
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