Pseudoliparis swirei (Mariana hadal snailfish): 130194228
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Entry
130194228 CDS
T09868
Name
(RefSeq) 5-hydroxytryptamine receptor 3C-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
130194228
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130194228
Ion channels [BR:
pswi04040
]
Ligand-gated channels
Serotonin (5-HT3)
130194228
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
130194228
NCBI-ProteinID:
XP_056271112
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Position
5:18418346..18421140
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AA seq
331 aa
AA seq
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MEKNSAQFVPYIYLFSDGLVIDSQPVKVISSCSLDFYKFPFDTQNCSFSFNSYIHRRRTL
QIYLSSTVADILKYSQEVMATMGEWELVGLTVKTFVPPPGNEDVWDEMRFFVFVKRRATL
YVVNLLIPSYFLITVDLFSFLLPPQNVDRTLMKMTLILGFTVFLLIMSDLLPASGNTVPL
INVFLCLCLALMVASLLESILITNLLRGSAHYSAVPRWVRVFVLRILGRLVRLRPKPRDQ
EDTVIQNPATQEDSKVSQQKGPLDEEKARKELRRLGNDFQAICLQVKHRLGEKQESEWIQ
VGFIIDRLLLGMYIIFLSVSFSTIITIWMQS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaactcagcacaatttgtcccatacatttatctgttttctgatggcttggtg
attgattctcagcctgtcaaagtaatcagctcctgctcgcttgacttctacaagtttcca
tttgatacccagaactgcagctttagcttcaactcctacatacaccgtcgaagaactctt
cagatatacctctcatcaactgtagcggatatattaaaatactctcaagaagtgatggca
actatgggagagtgggaactagttggactcacagtgaagacattcgtaccaccccctggg
aatgaagacgtgtgggacgagatgcgcttctttgtgttcgtaaagcgccgggccaccctc
tatgtggtgaacctgctgatccccagctacttcctcatcacagtggacctcttcagcttc
ctgctgcctccccagaacgtggaccggaccttgatgaagatgacgctgatcctgggcttc
accgtcttcctgctcatcatgagcgacctgctgcctgccagtgggaacaccgtacctctc
ataaatgtgttcctgtgtctgtgcctggctctgatggtggctagtctactggagagcatc
ctcatcaccaacctgctgcgtggctccgctcactactctgcagtccctcgttgggtcaga
gtgtttgttcttcgcatcctgggccgcctggtacggcttcgtcccaagcccagagatcaa
gaggacacggtcatccaaaatcctgccacacaagaggacagcaaggtttcacaacagaaa
gggccgctggatgaggagaaggcccggaaggagctgaggcgcctaggaaacgacttccag
gccatctgcctacaggtgaagcatcggctaggggaaaaacaggagtcagagtggatccag
gtaggtttcatcatagaccgcctgctgttaggcatgtacatcatcttcctatcagtcagc
ttcagtacaatcatcactatctggatgcagtcataa
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