Pseudoliparis swirei (Mariana hadal snailfish): 130194229
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Entry
130194229 CDS
T09868
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
130194229
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130194229
Ion channels [BR:
pswi04040
]
Ligand-gated channels
Serotonin (5-HT3)
130194229
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
130194229
NCBI-ProteinID:
XP_056271113
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All DBs
Position
5:18449753..18455242
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AA seq
465 aa
AA seq
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MGPTQRSIISGLLLIQLSCKEGHSGPTHESMQAVFDREPFRPAVNLSNPTITNISFTLYA
VLGVNEKTQILTTFLWLRLYWHHEFLVWDPDECDGVTKISLPVKKLWSPDIIIYEFVDAD
VSQACPYVYVNHTGHIRWDRMLRLVSACNLKIFSFPFDMQNCSFTFGSYMHTIRDVRVSP
ALTFQEMSTNSKRYLEASGEWELVDILGETSILKFGVDEWDIITFWVVIKRRPVLYVVNL
LIPSSFLMFIDIMSFYLPPHSVDRASFKMTLILGYTVFLLIMNDLLPSTANGTPLIGIYF
SVCLALMVISLLETVIITNVLHHNSIKYQEVPNWVRVVVLKHIANLICYQWPEEIKTPAE
PQKDEPEISNGDSGLWIIQPASQTPDQDPPIIGGAASLPELQQICQYLGDLRAHLTSKHK
ESELLDQWCHVGYVLDSLLFRIYLLLISCYALVIITMWCVWINQS
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgggtccgactcagaggagcatcatctcaggtttactcttaattcaactgtcctgtaaa
gaaggccacagtggtccaacccatgagtccatgcaggctgtgtttgaccgagaacccttc
aggccagcagtgaacctcagcaatcccaccataactaacatctccttcaccctgtacgct
gtcctgggggtgaatgagaaaacccaaatactcactactttcttgtggctgagactgtac
tggcaccatgagttcttggtttgggaccctgacgagtgcgacggtgtcaccaagatttct
ctccctgtgaagaagctctggtctcctgacatcataatttatgagtttgtggatgctgat
gtttcgcaagcgtgcccttacgtctacgtcaaccacacaggtcacatccgttgggacagg
atgcttcggcttgtctcagcctgcaacctgaagatcttcagttttccttttgacatgcag
aattgttcatttacatttggctcctacatgcatactataagggatgtgagggtcagtcca
gctttgacctttcaggagatgtctacaaattcaaagcgttacctggaagccagtggggag
tgggaactggtggacatactgggagagacctcaatcctcaagtttggggtcgacgaatgg
gatattatcaccttctgggtggtcataaagcgacggccggtgctatacgtggtcaatctg
ctgatccccagctccttccttatgttcatcgacatcatgtccttctacctgcccccccat
agcgttgaccgcgcctccttcaagatgactctcatcctgggctacactgttttcctgctc
atcatgaacgacctgttgcccagcacagcaaacggcacgcccctcataggtatatatttc
tccgtgtgtctggccctcatggtcatcagccttttggagacggtcatcattaccaatgtc
cttcatcacaactccattaaatatcaagaggtgccaaactgggtcagggtggtcgtcctc
aaacacattgccaacctcatctgttaccaatggccggaggagatcaagacccccgctgaa
ccgcagaaggatgaacctgaaatttcgaatggcgattctgggttgtggatcatccaacca
gccagtcagacacctgaccaggacccacccatcataggaggtgcagcttctctgcctgaa
cttcaacagatctgtcaatacctgggagaccttcgtgcccacctcacctcgaagcacaag
gagagcgagctgctggaccagtggtgccatgtgggatatgtcctcgactccctgctcttc
cgcatctatctgctgctcatctcctgttacgctctggtcatcatcaccatgtggtgcgtc
tggatcaaccagtcctaa
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