Pseudoliparis swirei (Mariana hadal snailfish): 130194274
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Entry
130194274 CDS
T09868
Name
(RefSeq) sex comb on midleg-like protein 2 isoform X1
KO
K11465
sex comb on midleg-like protein 2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130194274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130194274
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
130194274
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
RBR
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
130194274
NCBI-ProteinID:
XP_056271180
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All DBs
Position
5:complement(27227211..27237373)
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AA seq
700 aa
AA seq
DB search
MGKTPLKDQKDVKKEKPGRMVPLTESNPASAKDAFSWEEYLKETSSLPAPPGCFRQARVP
FSNDFKVGMKLEAHDPRNSTSVCIATVMGLTGVRLRLRLDGSDNSNDFWRLVDSADIQPI
GSCEKNGDMLQPPLGFRMNASSWPMFLLRTLNGAEMAPAAAFKKEPPRPPQNLFRFGMKL
EAVDKKNPYLICPATVGEVKGDEVFVMFDGWRGAFDYWCRYESRDVFPVGWCSLTRHSLQ
LPGNSASLPKAVSALPTSPSKPSRRSMQSPYRLPNPLPALPVRKGVRGRRPKSETIALLK
AAAEAAAAANAANAARGVALNGAAPEGTPLVPRLYKKRGPKPGSKRKSKLLQNSSQLSSI
QVPLESHGSLTSVVSTVCVYLNKQGVCGPHLDRKQMQRLPDHFGPGPVNAVLQLVVQSCI
DCAYQPKVLLSALQTHSGGGEVVRVRADGGVRVVKLPAASSAFSVLRFLETMCRQLQCDN
LFSSQPFSHHGYDRSRPVKEEAPDAPARGAKRSLSGASPPYTAPVSPKHLRTDAQPSEAE
TLPHEENGLLKEQRYMDSASISVTPRPQAAPRGSSEFHAHGAARYRHGSPAARRLSSNPA
ELGSKQPLRRVEAASSTTGPEAPPPGRPPSSWSIDEVMQFVRDADPTALAPHAELFRKHE
IDGKALMLLRSDMIMKYMGLKLGPALKLCHHIERLKHGKP
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaacgccactaaaagatcagaaagacgtgaagaaggagaaaccgggccggatg
gttccgctcacggagtccaaccccgcctccgcgaaagatgccttcagctgggaggagtac
ctgaaggagacgtcttccctgccggctccaccgggatgttttcgacaggctcgagtcccg
ttctccaacgacttcaaggtgggcatgaagctcgaggcccacgacccgcgcaactccacc
tcggtgtgcatcgccacggtgatgggcctaacgggcgttaggctccgcctccgcctggac
ggcagcgacaacagcaacgacttctggcgcctcgtggactcggccgacatccagccgatc
ggcagctgcgagaagaacggagacatgctgcagccgccgctgggcttccggatgaacgcc
tcctcgtggcccatgttcctcctgaggaccctgaacggggccgagatggcgccggccgcc
gccttcaagaaggaacccccgaggcccccgcagaacctcttccggttcggcatgaagctg
gaggccgtggacaagaagaacccgtacctcatctgccccgccacggtcggcgaggtgaag
ggcgacgaggtcttcgtgatgttcgacggctggcgcggcgccttcgactactggtgtcgg
tacgagtcccgggacgtgttccccgtgggctggtgctcattaaccaggcacagcctgcag
ctacccggcaacagcgcgagccttcccaaagccgtgtccgccctcccgacgtcgccctcc
aagccgagccggcgctccatgcagtctccgtaccggctgcccaacccgctgccggcgctg
cccgtcaggaagggggtccggggccggcggcccaagagcgagaccatcgctttgctgaag
gccgcggcggaggcagcggcggccgccaacgccgccaacgccgccagaggcgtcgcgctc
aacggagcggcgcccgaaggcacgccgctcgtcccccggctgtacaagaagagggggccc
aagcccggcagcaagaggaagtcgaagctcctccagaactcgtctcagctgtcgagcatc
caggttcctctagagagccacggcagcctcacctcggtggtctcaacagtctgcgtctac
ctgaacaagcagggggtctgcggccctcacctggacaggaagcagatgcagcgcctcccg
gaccacttcgggccgggcccggtgaacgcggtgctgcagctggtggtccagtcctgcatc
gactgtgcgtaccagcccaaggtcctgctgagcgccctgcagacccactcggggggaggg
gaggtggtcagagtgcgagccgacggcggcgtccgcgtggtgaagctgccggcggcctcc
agcgcgttctccgtgctgcgcttcctggagacgatgtgccgccagctgcagtgcgacaac
ctgttcagcagccagccgttcagccaccacggctacgaccgcagccggccagtgaaagag
gaggcgccggacgctccggctcggggggccaagcggagtctctcgggggcctcgccgccg
tacacggctcctgtgtcgcccaaacatctacgaaccgacgctcaaccctcagaagcagag
actcttccccatgaggagaacggcctcttaaaggaacagcgctacatggactccgcctcc
atctccgtgacccctcgacctcaggcggcgccgcgcggctcctcagagttccacgcccac
ggcgccgcccgctaccgccacggctcgccggccgcacgccgcctctcctccaacccggcg
gagctcggctccaagcagccgctcagacgggtagaagcagcgagctccaccaccggcccc
gaggccccgccccccggccggcccccgtcctcctggtccatcgatgaggtcatgcagttc
gtgcgggacgccgaccccacggcgctggcgccgcacgccgagctgttccgcaaacacgag
atcgatggtaaggctctgatgctgctgcggagcgacatgatcatgaagtacatggggctg
aagttaggccccgccctcaagctgtgtcaccacatcgagcggctgaaacacgggaaaccc
tga
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