Pseudoliparis swirei (Mariana hadal snailfish): 130194361
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Entry
130194361 CDS
T09868
Symbol
fcho1
Name
(RefSeq) F-BAR domain only protein 1
KO
K20042
F-BAR domain only protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130194361 (fcho1)
Membrane trafficking [BR:
pswi04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
130194361 (fcho1)
Bin/Amphiphysin/Rvs (BAR) family proteins
F-BAR proteins
130194361 (fcho1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
muHD
GMIP-like_FCH
FCH
Adap_comp_sub
DUF3502
SHE3
Motif
Other DBs
NCBI-GeneID:
130194361
NCBI-ProteinID:
XP_056271311
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All DBs
Position
5:1504738..1540710
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AA seq
1190 aa
AA seq
DB search
MTFFQNNFWGEKNAGFDVLYHNMKHGQLATKELAEFVRESAAVEETYSKSMSKLAKIASN
GSPQGTFAPMWDVFRVSSDKLALCHLELMRKMNDLIRDFNKYGDEQVKVHRKTKEEMAGT
VEAVQALQVQNGHLLKSKEGYHAKCCELDRLRKEGAPPKELEKAELKSKKAAESLAACVE
KFNRVGGEFEQKMSESSQKFQEIEETHLRQVKQLIKGYSHSIEDTHVQVGQVHEEFKQNV
ENIGVDDLIQKFAEQKGTGKDRPAAACVEEHMTAPPPEGGKKSRAKAFRIPGLGKRDKEP
DSTDSPVTETLNSPLEVDDEGFIIRADSTHNGCSEDKEHNFYSSDSDFDDEEPKKFHIQI
RPVASGRGRSAATEKELKATMRALTLPPNRGGRQQVAVSLQRHLSRNSSSAGGRSEEGDV
SSHRDGEQEGLCRSTSSPDHSRLSSTASDSLFGPPLESTFKSKSFSSRELGAFRAFGNSE
YAFSSDSSSPDNVEDSGLDSPSHQPLGPSPEPAGWAAWPPPPAAPMQTLGRPADPFPSAF
RDPSPARSPPRPRGGDPAGVWSVASSRPSVADPPSSARFPAFSPQPLLLPTPEAESSVWS
CRHVPPEDPFLAAIERTGAPEASDLSSAWARPPPRPRPDPFAVAQAPLPTSSSSSSSHRK
RDQSLPPPDDPFAITMIGSPTHQSSLAAAGGGGASTHSNRPLLEATSSSLPSAQPKELIH
WNSFHNPVSESGSKEGGAKGEGGAKGGGGGGRGEGGGGRRKHRSSDGGEPRRNAPPLTRH
SGPQVDLCFSTDKDQDCLDLNTPPAPSGSHAGSKHTSVRRDSADVSSAPRTTRVKRTSGR
QGGCERSRSLCSSPQPEPRPALSASSSPGEWGPKAGASWGGQDRAPSPASPPPPQNQDQQ
QRQRHLSRGPSPIPLGTQEAWPVAAAITEYINAYFKGGQHNHCLVRITGDLTVSFPAAVA
RMFTANINVPPLGFRLLNASRIDHVLPNQTLLYSDPSQSDPDSRDFLFNMASLQLHLQRE
AELNPQASYYNIALLKYQVSSQDPGRAPLLLSAECQRGGTVTRVSLDYHCCPATAPSTQL
AAVQVLLPLDRDASDLQCQPPASWNAEERRLLWKLPNISPTNHSKGSGTLCASWQSPEPP
RGPPPSLAVQFVGSGASLSGVGVELLGARYRLSLVKKRFATGKYLAGCSS
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgaccttctttcagaacaacttctggggcgagaagaatgccggcttcgacgtgctctac
cacaacatgaagcacggccagctggccaccaaggaactggccgagttcgtccgtgagagc
gctgctgttgaagagacttactccaagtccatgagcaaactggccaagattgccagcaac
gggagtcctcaggggacctttgcccccatgtgggatgtgttcagggtctcctcggacaaa
ctggccctgtgccacctggagctgatgaggaagatgaacgacctcatccgggacttcaac
aagtacggggacgagcaggtcaaagttcaccgcaagaccaaggaggagatggcgggcacg
gtggaggcggtgcaggcgctgcaggtgcagaacggccacctgctgaagtctaaggagggg
taccacgccaagtgctgcgagctggaccggctccggaaggagggggcgccgccgaaggag
ctggagaaggcggagctgaagtccaagaaagcggccgagtcgctggcggcgtgcgtcgag
aagttcaaccgcgtgggcggagagttcgagcagaagatgagcgagtcctcccagaagttt
caggaaatcgaggagacccacctgcggcaggtgaagcagctgatcaaaggttactcccac
tccatagaggacacccacgttcaagtgggacaggtccacgaggaattcaagcagaatgtg
gaaaacatcggcgtcgacgacctcatccagaagtttgcggagcagaagggaaccggcaag
gaccggccagccgcggcgtgtgtcgaggagcacatgacggctccgcctccagagggcggt
aagaagagtcgagccaaagccttcaggatccccggcctcggcaagagggacaaggagccg
gactccacagactcccctgtgacggagacgctgaattcgcccctggaagtcgacgatgag
ggattcatcatccgagctgacagcacacacaatggctgctccgaggacaaagaacacaac
ttctactccagcgactccgacttcgacgacgaggagcccaagaagttccacatccagatc
cgcccggtggcgagcggccgcggccgctccgccgccacggagaaggagctgaaggccacg
atgcgggcactcacgctgccgcccaacaggggcggccggcagcaggtcgcggtgtcgctg
cagcgtcacctctccaggaactccagttctgcaggaggtcgatcagaagagggcgacgtg
tcctcccacagggatggagagcaggagggtctctgcaggtccacctccagtcctgatcac
agcaggctgagctccacggcctccgacagtctgttcggtcctcctctggagtcgaccttc
aagtccaagagcttctcgagtcgggagctcggtgccttcagggccttcgggaactctgag
tacgccttctcgtccgactcgtcgtctccggacaacgtggaggactcgggtctggactcg
ccgtcccatcagcccctgggcccgtcccccgagccggcgggctgggcggcgtggcccccg
ccccccgcggcgccgatgcagacgctgggccggcccgccgacccgttcccctccgccttc
cgcgacccctcccccgctcgcagcccgcctcgcccgcgggggggcgaccccgccggcgtc
tggtccgtggcctcgtcgcgtccctcggtcgccgacccgccgtcgtccgcgcggttcccc
gccttctccccgcagcccctcctcctccccacgccggaggcggagtcatctgtgtggagc
tgcaggcacgtcccccccgaggaccccttcctcgccgccatcgagaggaccggcgccccg
gaggcgtccgacctgtcgagcgcctgggcgcggccgccgcctcgcccgagacccgacccg
ttcgccgtcgcccaggcgccgctccccacctcctcctcctcttcctcctctcaccgtaaa
cgagaccagagcctcccgccgcccgatgacccgtttgccatcacgatgatcggcagcccc
acgcaccaatcgtctctggctgccgctggggggggcggggcctccacccacagcaaccgg
ccgctactggaggccacctccagctcgttgccctcggctcagcccaaggagctgattcac
tggaactccttccacaaccccgtcagtgagagcggctccaaggagggaggagctaaagga
gagggaggagctaaaggaggtggaggtggaggtcgaggagagggaggcggagggaggagg
aaacatcggtcgtcggacggcggcgagccgcgtcggaacgccccgccgctcacgaggcat
tcagggcctcaggtggatctgtgcttctccaccgataaggatcaggactgtctggacctg
aacacgccgccggcgcccagcggctcgcacgccgggtccaagcacaccagcgtccggcgg
gactcggccgacgtgtcttcagctccgagaacgactcgagtcaaaaggacgtcggggcga
caaggcggctgcgagagatcgcgctcgctgtgctcctccccgcagccggagccccgcccg
gccctcagcgcctcctcctcccccggtgagtggggccctaaggccggggcctcgtggggg
gggcaggaccgggccccgagccccgcctcccctccgcccccccagaaccaggaccagcag
cagagacagcgtcacctgtctcgagggcccagtcccattccactgggcacacaggaggcg
tggcctgtggcggcggccatcacggagtacatcaacgcctacttcaaaggggggcagcac
aaccactgtctggtgaggatcacaggagacctgaccgtgtctttccccgccgccgtcgcc
cgcatgttcaccgccaacatcaacgtcccgccgctcggcttccggctgctcaacgcctcg
aggatcgatcacgtcctgcccaatcagacgctgctctacagcgacccgtctcagagcgac
cccgactccagggacttcctgttcaacatggcgtctctgcagctccacctgcagcgggag
gcggagctgaaccctcaggcgtcgtactacaacatcgccttgctcaagtaccaggtgtcg
tcccaggacccgggccgggcccccctcctgctgtcggcggagtgccagcgcggcggcacg
gtgacccgggtctctctggactaccactgctgcccggccacggcgccgtccacgcagctc
gccgccgtgcaggttctgctgccgctggaccgcgacgcctcggacctgcagtgccagccg
ccggcctcctggaacgcggaggagagacggttgctgtggaaactcccaaacatctccccg
accaatcacagcaaaggctcggggaccctgtgtgccagctggcagagcccggagcccccc
cgcggccccccccccagcctggcggtgcagttcgtgggctcgggggcgtcgctgtcgggc
gtcggcgtggagctgctcggcgctcgctaccgcctgtcgctcgtcaagaagaggttcgcc
acagggaagtacctggccggctgctcctcgtga
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