Pseudoliparis swirei (Mariana hadal snailfish): 130194362
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Entry
130194362 CDS
T09868
Symbol
rfx2
Name
(RefSeq) DNA-binding protein RFX2 isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130194362 (rfx2)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Other basic domains
RF-X
130194362 (rfx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
ThermoDBP-RP_arch
HisKA
AnmK
Motif
Other DBs
NCBI-GeneID:
130194362
NCBI-ProteinID:
XP_056271312
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All DBs
Position
5:complement(1540719..1583812)
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AA seq
740 aa
AA seq
DB search
MQSSEGGSDTAASVATLRTSSSAQAPVVQPVPASQQRVLVQATGSAQKGGQVQQLSVPRV
HQASQQVQQVQQVQHVYPSQVQYVGESGETVYTNGTIRTAYSYNPEAQLYGQGSGGGAYF
DSQAGGAHVTTVVSSAGGGVPPHGMVGITMDVGGSHIISSGSTYLIHGGSMEGSRNHISH
SSRSSSAMLEMAIENLQKSEGIASHKSSLLNSHLQWLLDNYETAEGVSLPRCSLYNHYLR
HCQEQKLDPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGIRVKPDSPLNRLQEDTQ
YMAMRQQPVHQKQRFKPLQKVDGMSDSLCGGSQNCSSTPEQSVAAQSQHHQQYIDTSHSL
PPFPSPELGSQPLPERLNVNDIKKLQSFYRDHCEATLDVVMNLQFHYIEKLWQTFWYSTA
PSSDGNTTMPNSDDDLEGAIPREKLLSLCKYEPVRLWMKSCDHILYQALVEILIPDVLRP
VPSTLTQAIRNFAKSLEGWLTNAMTSFPQEIIRTKVAVVSAFAQTLRRYTSLNHLAQAAR
AVLQNTSQINQMLSDLNRVDFANVQEQASWVCQCDESVVQRLEQDFKVTLQQQSSLDQWA
GWLDNVVSQVLKPHQGSASFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLY
DEYMFYLVEHRVARATGETPIAVMGEFSDLPSMMPSLMEKDASFSDEMSDLGSDGDASRG
PTEPAVKRERIELSHPLQEM
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgcagagctcagaaggagggtccgacaccgcggccagcgtggcgacgctgcggacgtcg
tcatcggctcaggcccccgtggtccagcccgtgccggcctcccaacagagggtgctggtt
caagctacaggctcagctcagaagggaggacaagtacagcagctttcagtacccagggtg
caccaggcctctcagcaggtgcagcaggtgcagcaggtgcagcacgtctacccgtcacag
gtccagtacgtgggagagagcggagagacggtgtacaccaacgggacgatccggacggcc
tactcctacaaccccgaggcccagctgtacgggcagggcagcggggggggcgcgtacttc
gactctcaggccggcggcgcccacgtcaccacggtggtgtcctcggccggcggcggcgtg
cccccccacggcatggtgggcatcaccatggacgtgggcggcagccacatcatctccagc
ggcagcacctacctgatccacgggggcagcatggaggggagccgcaaccacatctcgcac
tcgtcgcgctcgtcctcggcgatgcttgaaatggcgattgaaaacctccaaaagtctgaa
ggaattgcgagtcacaaaagcagcctgctcaacagccatctgcagtggctgctggacaac
tacgagacggcggagggcgtgagcctgccccgctgctcgctgtacaaccactacttgagg
cactgccaggagcagaagttggacccggtcaacgccgcctccttcggcaagctcatccgc
tcggtattcatgggcctgcggacgcggcgcctcggcaccagaggaaactctaagtaccat
tactacggcatccgggtgaagccggactcgcctctgaaccggctgcaggaggacacgcag
tacatggccatgaggcagcagcccgtgcaccagaagcagaggttcaagcccctccagaag
gtggacgggatgtctgacagcctgtgcggcggctctcagaactgcagcagcaccccggag
caatcggtggcggctcagagtcaacaccaccagcagtacatcgatacgtcccactccttg
cctcccttcccgtcccctgagttgggctctcagccgctgcccgagcgcctcaacgtcaac
gacatcaagaagctgcaatccttctaccgagaccactgcgaggctactctggacgtggtc
atgaacctccagttccactacatcgagaagctctggcagaccttctggtattcaacagcg
ccctctagtgacgggaacaccaccatgcccaacagtgacgatgacctggagggagcgatc
cccagagagaagctgctgtctctgtgtaaatacgagccggtgcgtctgtggatgaagagc
tgcgaccacatcctgtaccaggcgctggtggagatcctcatccccgacgtgctgcggccc
gttcccagcacgctcactcaggccatccgcaactttgccaagagtctggagggctggctg
accaacgccatgaccagcttcccccaggagatcatacgcaccaaggtggcggtggtcagt
gcgttcgcccagacgctgcggcgctacaccagcctgaaccacctggcccaggcggcccgc
gccgtcctgcagaacacgtcccagatcaaccagatgctgtcggacctcaaccgggtcgac
ttcgccaacgtgcaggagcaggcgtcgtgggtgtgccagtgtgatgagagcgtggtccag
cgcctggagcaggacttcaaggtgaccctgcagcagcagagctctctggaccaatgggcc
ggctggctggacaacgtggtctcccaggtcctgaagccccaccaggggagcgccagcttc
cccaaggccgcccgccagttcctcctcaagtggtccttctacagctccatggtgatcaga
gacctgaccctgcgcagtgcagccagcttcggctccttccacctgatccggctgctgtac
gatgagtacatgttctacctggtggagcaccgcgtggcgcgggccaccggggagacgccc
atcgccgtgatgggggagttcagtgacctcccctccatgatgccgtcactgatggagaaa
gatgcgtccttctccgatgagatgagtgacctcggcagtgacggcgacgcctccagaggt
ccgactgagccggccgtgaagagagagagaatcgaactgagccacccgctgcaggagatg
tga
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