Pseudoliparis swirei (Mariana hadal snailfish): 130194374
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Entry
130194374 CDS
T09868
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130194374
04121 Ubiquitin system [BR:
pswi04121
]
130194374
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130194374
Membrane trafficking [BR:
pswi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
130194374
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130194374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
Zn_ribbon_19
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-Nse
zf-RING_16
HypA
C1_2
DZR
Zn_ribbon_6
DUF7559
Motif
Other DBs
NCBI-GeneID:
130194374
NCBI-ProteinID:
XP_056271333
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All DBs
Position
5:complement(23877642..23885111)
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AA seq
319 aa
AA seq
DB search
MAEAPLWPSRFFCHRCSAEISPRLPEYTCPRCDSGFIEELLEERRADNVSTSAISSGPQN
QQPFENPDQQLFTFPSGYGQFALGVFDDRFDFGAGQGVEDNRDAENRRERETASRQRYGA
RQPRSRHGSRRQAGRQEGVPTLEGIIQQLVNGIIAPTAMPNIGVGPWGVLHSNPMDYAWG
ANGLDAIITQLLNQFENTGPPPADRDKIKTLPTVQITEEHVVSGLECPVCKEDYSVGENV
RQLPCNHMFHNDCIVPWLEQHDTCPVCRKSLCGQNTATNPPELSGMNFTSSSSSSSASSS
SSTPQSSSSASNENSTDNS
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagctcctctatggcccagccggttcttctgccacagatgctccgcggagatt
agtcctcggcttcccgagtatacatgtccgagatgtgactctgggtttatcgaggaactg
ctggaggagagacgcgctgacaacgtctccacgtctgccatctccagcgggccccagaac
cagcaaccatttgagaatccggaccagcaattgttcacattcccttctggctacggccag
tttgccctgggcgtctttgacgaccgcttcgacttcggggccggacagggagtggaggac
aacagggacgctgaaaacaggcgagaaagggaaacggcgtcgcggcaacggtacggcgcc
aggcaaccgaggagtcgtcatggttcgaggcggcaagcggggaggcaggagggagttccg
accctcgagggaatcatccagcaactagtgaatggaatcattgcacccactgcaatgcca
aatatcggtgttggaccctggggtgttcttcactctaatcctatggattatgcctggggg
gctaatggactagacgcaattataactcagctattaaaccagtttgagaacacggggcct
ccgcccgccgatagggataaaataaaaactcttcctacagtacaaattacagaggagcac
gttgtttcaggactggaatgtccagtgtgtaaagaagattacagtgtcggagaaaatgtg
aggcagctcccgtgcaatcacatgttccacaatgattgcatagtcccgtggctggaacag
catgacacgtgtccagtgtgcaggaaaagcttgtgtggacagaacacggcgacgaaccct
ccagaactctcagggatgaactttacctcctcctcctcctcttcctccgcctcctcatct
tcctcgactcctcagtcctcgagttcggccagcaacgagaattccactgataactcctag
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