Pseudoliparis swirei (Mariana hadal snailfish): 130194387
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Entry
130194387 CDS
T09868
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130194387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130194387
03016 Transfer RNA biogenesis [BR:
pswi03016
]
130194387
03012 Translation factors [BR:
pswi03012
]
130194387
04131 Membrane trafficking [BR:
pswi04131
]
130194387
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pswi04147
]
130194387
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
130194387
Transfer RNA biogenesis [BR:
pswi03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
130194387
Translation factors [BR:
pswi03012
]
Eukaryotic type
Elongation factors
130194387
Membrane trafficking [BR:
pswi04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
130194387
Exosome [BR:
pswi04147
]
Exosomal proteins
Proteins found in most exosomes
130194387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
130194387
NCBI-ProteinID:
XP_056271360
LinkDB
All DBs
Position
1:complement(3483884..3487208)
Genome browser
AA seq
461 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTSTGHLIYKCGGIDKRTIEKFEKEASEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFGTPRYYVTIIDAPGHRDFIKNMITGTSQADCAVLVVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQTRFEEIQKEVSTYIKK
IGYNPAAVAFVPISGWHGDNMVEPSSNMTWFKGWKVERKEGTSNGVTLLEALDAIQPPSR
PTEKPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPCNLTTEVKSVEMHHESLL
EAMPGDNVGFNIKNVSVKEIRRGYVAGDSKNDPPKGADTFNAQVIILNHPGQISQGYAPV
LDCHTAHIACKFSELIEKIDRRSGKKLEDAPKFVKTGDAAIIKLLPQKPMVVEPFASYPP
LGRFAVRDMRQTVAVGVIKTVDYKEVSGKTTKAAEKAQKKK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagatccacatcaacatcgtggtcattggccatgtcgactccggcaag
tccacctccaccggacatttgatctacaaatgcggaggcatcgacaagagaaccatcgag
aagttcgagaaggaagccagcgagatgggcaagggctccttcaagtacgcctgggtgctg
gacaagctgaaggccgagcgtgagcgtggcatcaccatcgacatcgctctgtggaagttt
gggacccccaggtattacgtgaccatcatcgatgcccccggacacagggacttcatcaag
aacatgatcaccggtacctctcaggctgactgcgccgtgttggtcgttgctgccggtgtt
ggtgagttcgaagccggcatctccaagaacggccagacccgcgagcacgccctgctggcc
tacaccctcggcgtgaagcagctcatcgtcggagtcaacaagatggactccaccgagccc
ccttacagccaaacccgtttcgaggaaatccaaaaggaagtgagcacctacatcaagaag
atcggctacaaccccgccgccgtcgcctttgtccccatctctgggtggcacggcgacaac
atggttgagcccagcagcaatatgacctggttcaagggatggaaggttgagcgcaaggag
ggaacttcgaatggcgtcacactgctggaggctctggatgccatccagccgccatctcgt
cccaccgaaaagcccctgcgtctgcccctgcaggacgtctacaagatcggaggtattgga
acagtacccgttggtcgtgttgagaccggcatcatcaagcccggcatggtcgtcaccttc
gctccctgcaacctgaccaccgaggtaaagtccgtggagatgcaccacgagtctctgctc
gaagccatgcccggtgacaacgttggattcaacatcaagaacgtgtcggtcaaggaaatc
cgtcgtggatacgtggctggagacagcaagaacgacccacccaagggagctgacaccttc
aacgcccaggtcatcatcctgaatcaccccggtcagatctcccagggttacgcccccgtg
ctggattgccacaccgctcacattgcctgcaagttcagcgagctcattgaaaagattgac
cgtcgttccggcaagaagcttgaagatgcacccaagttcgtcaagactggagatgcagcc
atcatcaaactgctcccacagaagcccatggttgtggagcccttcgccagctaccctccc
ctcggtcgttttgccgtgcgtgacatgaggcagacggtggccgtcggcgtcatcaagact
gtcgactacaaggaggtttccggaaagacaaccaaggctgccgagaaggcccagaagaag
aaatga
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