KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130194412
Entry
130194412         CDS       T09868                                 
Symbol
comp
Name
(RefSeq) cartilage oligomeric matrix protein
  KO
K04659  thrombospondin 2/3/4/5
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04145  Phagosome
pswi04510  Focal adhesion
pswi04512  ECM-receptor interaction
pswi04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    130194412 (comp)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    130194412 (comp)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    130194412 (comp)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    130194412 (comp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pswi04131]
    130194412 (comp)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pswi04147]
    130194412 (comp)
   00536 Glycosaminoglycan binding proteins [BR:pswi00536]
    130194412 (comp)
Membrane trafficking [BR:pswi04131]
 Endocytosis
  Phagocytosis
   Opsonins
    130194412 (comp)
Exosome [BR:pswi04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   130194412 (comp)
  Exosomal proteins of colorectal cancer cells
   130194412 (comp)
  Exosomal proteins of bladder cancer cells
   130194412 (comp)
Glycosaminoglycan binding proteins [BR:pswi00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   130194412 (comp)
SSDB
Motif
Pfam: TSP_C TSP_3 EGF_CA EGF_3 EGF
Other DBs
NCBI-GeneID: 130194412
NCBI-ProteinID: XP_056271410
LinkDB
Position
5:complement(975198..996100)
AA seq 698 aa
MVFLKNTVMECEACGMGGVQPRPSCRPSSCHPGVTCQETPQGVTCGPCPHGMEGNGTYCT
DVDECSVTPCHMGVRCINTSPGFRCGSCAAGFTGPQVHGVGLQYAAANRQVCRDINECEG
LNNGGCEENSLCMNTPGSFRCGPCNVGYVGDQRQGCRPERACGDGQVNPCHASAECIVHR
EGRLECQCGVGWAGNGLLCGADVDIDGFPDERLTCPEKTCNKDNCLTVPNSGQEDADGDG
MGDACDEDADGDGILNMQDNCVLVPNVDQRNVDQDDFGDACDNCHAAENADQKDTDGDER
GDECDEDIDGDGVLNQLDNCRQVPNADQKDRDGDKVGDACDSCPYVPNPEQTDVDNDLIG
DPCDTNKDSDGDGHQDSRDNCPAVLNSSQLDTDKDGVGDECDDDDDNDGVPDLLPPGPDN
CRLIPNPLQEDSNGDGVGNICEKDFDNDTIIDTIDVCPENAEVALTDFREYQTVVLDPEG
DAQIDPNWVVLNQGREIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNTVTDDDYAGFIFGY
QDSSSFYVVMWKQVEQIYWQANPFRAVAEPGIQLKAVKSDTGPGENLRNALWHTGDTAAQ
VKLLWKDTRNVGWKDKTSYRWFLQHRPADGYIRVRFFEGPKLVADSGVIIDSTMRGGRLG
VFCFSQENIIWANLRYRCNDTLPEDFDSYRARQVQLEL
NT seq 2097 nt   +upstreamnt  +downstreamnt
atggtgttcctgaagaacacggtgatggagtgtgaagcctgcggcatggggggggtgcag
cctcggccctcctgccggcccagctcctgccacccgggggtgacgtgtcaggagacgcct
cagggtgtcacatgtgggccgtgtccccacggcatggaggggaacggcacctactgcacc
gacgtggacgagtgcagtgtgactccgtgccacatgggggtgcgttgcatcaacacgtct
ccggggttccgttgtggttcttgtgctgccgggttcaccgggcctcaggtccacggcgtg
gggctccagtacgccgccgccaaccgccaggtgtgcagagacatcaatgagtgtgagggc
ctgaacaacggcggctgtgaggagaactcattgtgcatgaacacgccgggctccttcagg
tgcggcccctgtaacgtgggctacgttggggaccagcggcagggctgcaggccggagcgg
gcctgtggggacggccaggtgaacccctgccacgccagcgccgagtgcatcgtccaccga
gaggggagactggagtgccagtgcggcgtcggctgggccggtaacggcctcctgtgcggc
gccgacgtcgacatcgacggtttcccagacgagaggctgacctgtcctgagaagacctgc
aacaaggacaactgtctcaccgtccctaactccggtcaagaagacgccgacggcgatggg
atgggagacgcctgtgacgaggacgccgacggggacgggatcctcaacatgcaggacaac
tgtgtgctggtgcccaacgtggaccagaggaacgtggaccaggacgacttcggagacgcc
tgcgacaactgccacgccgcggagaacgccgaccagaaagacaccgacggggacgagcgc
ggggacgagtgcgacgaggacatcgacggagacggggtcctgaaccagctggataactgc
cggcaggtccccaatgccgaccagaaagaccgcgatggggacaaagtgggagacgcctgc
gacagctgtccttacgtcccgaacccggagcagacggacgtggacaacgacttgatcggc
gacccgtgtgacaccaacaaggacagcgatggagacggacaccaggactctcgggacaac
tgccccgccgtcctcaacagctcccagctggacacggacaaggacggcgtgggagacgag
tgcgatgacgacgacgacaacgacggcgtgccggacctgctgccgcccggccccgacaac
tgccgcctgatccccaaccccctgcaggaggactctaacggggacggagtggggaacatc
tgcgagaaggacttcgacaacgacaccatcatcgacaccatcgacgtgtgtccggagaac
gccgaggtggccctcaccgacttcagggagtaccagaccgtggtcctggacccggagggg
gacgctcagatcgaccccaactgggtggtgctgaaccagggaagagagatcgtccagacc
atgaacagcgaccctgggctggcggttgggtacacggccttcagcggcgtggactttgaa
ggaacgttccacgtcaacacggtgacggacgatgactacgccggcttcatcttcggctac
caggactcctcctccttctacgtggtgatgtggaagcaggtggagcagatctactggcag
gccaaccccttcagggccgtggccgagccgggcatccagctgaaggcggtgaagtccgac
acgggtccgggggagaacctgaggaacgccctgtggcacaccggcgacacggcggcgcag
gtgaagctgctgtggaaagacactcgcaacgtgggctggaaggacaagacgtcgtaccgc
tggttcctccagcaccggcccgccgacggctacatcagagttcgcttcttcgagggtccc
aagctggtggcggacagcggcgtcatcatcgactccaccatgaggggaggccggctcggg
gtcttctgcttctcccaggagaacatcatctgggccaacctgaggtaccgctgcaacgac
actctgccggaggactttgactcctacagagcccggcaggtccagctggagctctga

DBGET integrated database retrieval system