Pseudoliparis swirei (Mariana hadal snailfish): 130194439
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Entry
130194439 CDS
T09868
Symbol
usp24
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24 isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pswi01002
]
130194439 (usp24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130194439 (usp24)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130194439 (usp24)
Peptidases and inhibitors [BR:
pswi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130194439 (usp24)
Ubiquitin system [BR:
pswi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130194439 (usp24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
UCH_UBL1
UBA
DUF3517
UBA_RAD5A
UBA_7
Motif
Other DBs
NCBI-GeneID:
130194439
NCBI-ProteinID:
XP_056271454
LinkDB
All DBs
Position
5:25765582..25804635
Genome browser
AA seq
2645 aa
AA seq
DB search
METEEEQHITTLLCMGFPDPDVIRKALRLAKNDINEAVALLTNESPGLGYGYEPMESGPA
PGVGSTGDVESGGSSSGTGGGGGRTGTTGGFDPPPAYHDVVDSERSNDENGNCSGGSMEF
PTTNLYELESRVFTDHWSIPYKREESLGKCLIAATCLARLGLADADENCKRFIDRCMPEA
FKKLLTSSAVHKWGTEIHEGIYNMLMLLVELVAERVKQDPVAVNLMGVLTMAFNPDNEYH
FKNRMKACQRNWAEVFGEEANMFAVSPSNAYQKEPHGWLVDLVNRFGELGGFTAIQTKLN
VDEIEIACVSALVQPLGVGAEYLNSSLVQPMLDPVIHKMITYVQNLEEKDLKDKRLVSIP
DLLSAIKLLCMRFQRELVTVVDDLRLDTLLRMLKTPHFSTKMNSLKEVTKLIEESTVSKT
VKNAIDTDKLLDWLVENSVLSIALEGNIDQAQYCERIKGIIELLGSKLSLDELSKIWKIQ
AGQSSTVIENIHTIIAAAAVKFSFDQLTHLFVLIQKSWEVESDRVRQKLLSLIGRIGRET
RSETTTGKVLEVLWELAHLPSLPTSLVQQALEEHLGILSDAYAVKETVKRGYIIKCIEDI
KKTHTQEDCRGSDTQSSFLTGTWGKKKASSVAKASQQSSPQAVWVVPALRQLHEITRSFI
KQTYQKQDKSIIQDLKKNFEIVKLITGSLVCCHRLAVTAAGNNGLSGSTLVDGRYTYQEY
LDSHLRFLAFFLQEASLYLVWNRAKELWECLVSGPDVCELDRELCFEWFTKGQHDLESDV
QQQLFKEKILKLEPYEITMNGFNLFKTFFENVNLCDHRLKRQGTQLCVERLDLAGMDFIW
RIAMETPDEEIANEAIQLIITYSYTNLNPKMKKDSVSLHKKFIADCYKRLEAASSALGGP
TLTHAVTRATKMLTATTMPTVATSVQSPSRYRGGFGSTKLVIIERLLLLAERYVITIEDL
YSVPRTILPHGASYNGHPVTLHITYESTKDTFTLETHSNEMIGSIRWKISEHLSCPVDNV
QIFANDSVMTMNRDQKLLSQLGFSDEQTLTVKSSGTGTPSGSSESSASASSSSSSAVFNS
AYALEQEKSLPGVVMALVCNVFEMLYQLANLDETRITLRVRKLLLLIPTDPDVQDALDNF
VPKESSVWSHQVQDQTRMKTLFQGTGSRSPSTSSKQQHQPSAASILESLFRSSAPGMSTF
RVLYNLEVLSSKLMPTSDDEMAKTSSKSFCENFLKAGGLSLVVNVMQRDSVPSEVDYETR
QGVYSICLQLARFLLVGQSMPSALDDDVIRDGESLSSRPFRNAGRAGRQLSLCGTPEKSS
YRQMSLSERSSIRVEEIIPAARVAIQTMEVGDFTATVACFMRLTWAAAAGRLDLVGSPQP
IRETHSALLPQGVRTRVSSTGSNCSSSSEGESPPTALHAGICVRQQCVSVKDAIIAREAL
SLLVTCLQLRCQQLCSFYNLPSVNDFIIDVLLGSPSGEIRRVACDQLYTLSQTDTSAFAE
LQKPNLFLISVVLTAQLPLWSPTSIMRGVNQRLLSQCTEYFDLRCQLLDDLTTSEMEVLN
VSAAAMLEDEISWLDNFEPSWSSEMETSEADNILLAGHLRLIKTLLSLCGNEKEQLGPSL
IQQLLDDFLFRASRIIINSSSPAPSPAPSHDFHPKYDTCSTASSRLAAYEVLVMLADSSL
PNLRLITRELMSMHHQSDPSLCKEFDYLPPVESRSSSGFVGLKNGGATCYMNAVFQQLYM
QPGLPEAFLSIEDDTDQPEESVFYQVQSLFGHLMESKLQYYIPENFWKIFKMWNKELYVR
EQQDAYEFFTSLVDQLDEHLKKMGREQIFKNTFQGIFSDQKICKDCPHRYEREETFMALN
LGVTSCQSLEISLDQFVRGEVLEGSNAYYCEKCKEKRTTVKRTCIKSLPSVLCIHLMRFG
FDWESGRSIKYDEQIRFPWVLNMEPYTVSGMARQDCSVEGGEGRGDGTSGGSPRKKVTIS
ENYELVGVVVHSGQAHAGHYYSFIKDRRGSARGHWYKFNDNVVEEFDMNDETLEYECFGG
EYRPKVYDQSNPYPDVRRRYWNAYMLFYQKISDQNSPVLPKKSRVSIMRQEAEDLTLSAP
SSPDVSPQSSPRPPRANNDRLTLLTRLVRKGEKKGLFVEKMPASIYQMVRDENLKFMRNR
DVYNSDYFNFTLSLASVNATKLKHPDYQPMAKESLQLAVHFLLHTYLHTKKKLRVDTEEW
MATVEVLLSKSCEACQWLVQYLSGPEGREMTRICLLECSVREVRVVVASILERTLESALH
FGDPGVDGLTDTLLSLLDKDVPENVKNCTQYFGLFSNFAQQGCGPCQLLLKHSAYRRMLI
FLLGPNRQNNQNRRWSPAQAREFLHLHNTLALITLHCDLNAQRTQAPGVFKLRVSCVPAS
TQLLPLHADILASLFTPEGQPYLLEVMFAMRELSGPLSLLIEMVTYSSYCNEPFSLGVLQ
LLKTQLETAPPHELKNVFQMLQELLVMEDPLQTQRLKYAFESEKGLLALMHQSNNVDSRR
CYQCVKFLVTLAQKCAPAKEYFKDLSGHWSWAVQWLQKKMTEHYWTPQSNVSNETSTNKT
FQRTISAQDTLAYATALLNEKEQSGSSNGSDGSPANDNADRSLRQGSESPMMLGDSKSDL
EDVDP
NT seq
7938 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgaagaggagcagcacataacgacgctcctctgcatggggttcccggacccc
gacgtgatacggaaggcgctccggctggcgaagaacgacataaacgaggcggtggcgctg
ctgacgaacgaaagccccggactcgggtatggatacgagccgatggagagcgggcctgcc
cccggcgtgggctcgaccggagacgtggagagcggcggcagtagcagcggcaccggcggc
ggcggcgggcggaccgggacgacgggagggtttgacccgccgcccgcgtaccacgacgtg
gtggatagtgagcggagcaacgatgagaacgggaactgctcggggggcagcatggagttc
cccaccaccaacctgtacgagctggagagccgcgtcttcaccgaccactggtccatcccc
tacaagagggaggagtccctgggcaagtgtctcatcgcggccacctgcctcgcccggctc
ggtctcgctgacgctgacgagaactgcaagcggttcatagaccgctgcatgccggaggcc
ttcaaaaagctgctgaccagcagcgcggtgcacaagtggggcaccgagatccacgagggg
atctacaacatgctcatgctgctggtggagctggtcgccgagagggtgaagcaggacccc
gtcgccgtgaacctgatgggagtcctgacgatggccttcaaccccgacaacgaatatcac
ttcaagaaccggatgaaggcgtgtcagaggaactgggccgaggtctttggggaagaggcc
aacatgttcgccgtgtctcccagcaacgcctatcagaaagagcctcacggttggctggtg
gatttggtgaatcggtttggagagttgggaggattcaccgccatccagacgaagctcaac
gtggacgaaatcgagatcgcctgcgtgtcggctctcgttcagcctcttggagtcggtgca
gaatatctgaactccagcctcgtccagcccatgctcgacccagtcatccataagatgatc
acgtatgtgcagaacctggaggagaaggaccttaaagacaagcgtctggtgagcatcccg
gacctgctgtcggccatcaagctgctgtgcatgaggttccagagggaactcgtcaccgtg
gtggacgacctgcggctcgacacgctgctgcgcatgctcaaaaccccccacttctccacc
aagatgaactccctcaaagaggtgaccaagttgatagaggagagcaccgtgtcaaagacg
gtgaagaatgccattgacacggataaacttttggactggctggtggagaactcggtccta
tcaatagcgctggagggtaacatcgatcaagctcagtactgcgagagaatcaagggaatc
attgagttgcttgggagtaaactgtcgctggacgagctctccaagatctggaaaatacag
gcgggtcaatcatcaactgtgatagaaaacattcatacaatcatcgccgctgctgctgtg
aagttcagcttcgatcaactcacccacctcttcgtcctcattcagaagagctgggaggtt
gagagcgaccgcgtgaggcagaagctgctcagtctgatcgggaggatcggcagagagact
cgctccgaaacgacaacaggaaaggtgctggaggtgctgtgggagctggctcacctcccc
agcctgcccaccagtctggtgcagcaggcgctggaggagcacctggggatcctgagcgac
gcctacgccgtcaaggagaccgtgaagcgcggttacatcatcaaatgcatcgaggacatc
aagaagactcacactcaggaggactgtagaggcagcgacactcaaagctcttttcttacg
ggcacttggggcaagaagaaggccagctctgtggccaaagcttcccagcagagcagtcct
caggcggtctgggtcgttcctgctctgcggcagctgcacgagatcacccggtccttcatc
aagcagacgtaccagaagcaggacaagagcatcatccaggacttgaagaagaacttcgag
atcgtcaagctgatcaccggctccctcgtgtgctgccaccggctggcggtgacggcggcg
ggcaacaacggcctctcgggctcgactctggtggacgggcggtacacctaccaggagtat
ctggacagccacctgcgcttcctggccttcttcctgcaggaggccagcctctacctggtg
tggaaccgggccaaggagctgtgggagtgtctggtgtcggggccggacgtctgtgaactg
gaccgtgagctgtgttttgagtggttcactaaaggacagcacgacctggagagtgacgtc
cagcagcagctcttcaaggagaagatcctaaagctggagccctacgagatcaccatgaac
gggttcaatctgttcaagaccttctttgagaacgtcaacctgtgtgaccatcgcctcaaa
cgccagggcacccagctgtgtgtggagcgcctggacctggcagggatggactttatctgg
cgcatcgccatggaaacccctgatgaagagatcgccaacgaggccatccagctcattatc
acgtatagctacaccaacctcaaccccaaaatgaagaaggactcggtgtctttgcacaag
aagttcatcgctgattgttacaagcgtctggaggcggcgagctcggcgctcggcgggccc
actctgacgcacgccgttaccagggcaaccaagatgctgacggccaccaccatgccgacc
gtggccacatctgtacaatcaccatccaggtacagaggggggtttggatccactaagctg
gtgataattgagcggctgctgctattggccgaacgctacgtcatcaccatcgaggacttg
tactctgttcctcgcactattctacctcacggggcctcgtacaacggccaccccgtcacc
ctccacatcacctacgagtccaccaaagacaccttcaccttagagacccacagtaatgag
atgataggaagtatccggtggaagatctcggagcacttgagctgcccggtggacaacgtc
cagatctttgccaacgacagcgtgatgaccatgaaccgggaccagaagcttctctcccag
ctcggcttcagcgacgagcagacgctgacggtgaagagctcgggcaccggcacgccgtcc
ggcagctccgagtcctcggcctcggcctccagcagctccagctccgccgtcttcaactcc
gcctacgccttggagcaggagaagtcgctgcccggcgtggtgatggcattggtgtgcaac
gtgttcgagatgctttaccagctggccaacctcgatgaaaccaggatcacgctccgcgtg
aggaagctgctgctgctcatcccgacagacccagatgttcaggacgcgctcgacaacttt
gtccctaaggagtccagcgtctggagccaccaggtacaggatcagaccaggatgaagacc
ctgttccagggaaccggctctcgctctccgtccacgtcctccaagcagcagcaccagccg
agcgccgcgtccatcctggagtccctcttcaggtcctcggccccgggcatgtccaccttc
agggtgctctacaacctggaggtgttgagctcaaagctcatgcccacgtcggacgacgag
atggcgaagaccagcagcaagtccttctgcgagaacttcctgaaagcgggaggcctcagt
ctggtggtgaacgtcatgcagagagactccgtcccctcagaggtcgactacgagacccgg
caaggagtctactccatctgcctgcagctggccaggttcctcctggtgggtcagagcatg
ccttcggcgctggacgacgacgtcatccgagacggcgagtcgctgtcgtcgcgtccattc
cgtaacgccgggcgagccgggcgccagctgtccctgtgcggcacgccggagaagtcctcg
taccggcagatgtctctgtccgagcgctcctccatccgggtggaggagatcatcccggcg
gcccgcgtcgccattcagacgatggaggtgggcgacttcaccgccacggtggcgtgcttc
atgcggctgacctgggcggccgctgcaggccggttggatctggtcggcagccctcagcca
atcagagagacgcacagcgccctgctgccgcagggggtccgcaccagagtcagcagtaca
ggaagtaactgcagctccagcagcgagggcgagtccccgccgaccgcactgcatgctggg
atatgcgtgcgacagcagtgcgtctccgtcaaagacgccatcatcgcccgcgaggctctg
tcgctgctcgtcacctgtctgcagctacgctgccagcagctgtgctctttctacaacctt
ccctccgtcaacgatttcatcatcgatgttctgctgggatctcccagcggagagatccgc
cgcgtggcgtgcgaccagctctacacgctgagccagacggacacgtcggccttcgccgag
ctccagaagcccaacttgttcctcatctccgtcgtcctcaccgcccagctgccgctctgg
agccccacctccatcatgagaggagtcaaccagaggttgctctcccaatgcaccgaatac
tttgacctcagatgtcagctcctggacgacctcaccacgtcggagatggaggtgctgaac
gtgagcgcggccgcgatgctggaggacgagatctcctggctggacaacttcgagcccagc
tggagctccgagatggagacgagcgaggcggacaacatcctgctggccggacacctgcgg
ctcatcaagacgctgctgtcgctctgcggcaacgagaaggagcagctgggtccgtctctc
atccagcagctattggacgacttcctgtttcgagcctcacgcatcatcatcaacagctca
agccccgccccctcccccgcgccgagccacgacttccaccccaagtacgacacgtgcagc
acggccagcagccggctggcggcctacgaggtgctggtgatgctggccgacagctctctg
cccaacctgcggctcatcaccagggagctcatgtccatgcaccaccagtcggacccgtcg
ctctgcaaggagttcgactaccttccccccgtggagagccggtccagttctgggttcgtg
gggctgaagaacggcggcgccacgtgctacatgaacgctgtgtttcagcagctctacatg
cagcccggcctgccagaggccttcctgtccatcgaggacgacacggaccagccggaggag
agcgtcttctaccaggtccagtctctgttcggccacctgatggagagcaagctgcagtac
tacatccccgagaacttctggaagatcttcaagatgtggaacaaggagctgtacgtgcgg
gagcagcaggacgcctacgagttcttcaccagcctggtggaccagctggacgagcacctc
aagaaaatgggccgagagcaaatcttcaaaaacacgttccagggaatcttctccgaccag
aagatctgcaaagactgtcctcaccggtacgagcgtgaggagaccttcatggcgttgaac
ctgggcgtgacgtcgtgccagagcctggagatctcattggaccagtttgtgaggggcgag
gtgctggagggcagcaacgcctactactgcgagaagtgcaaggagaagagaaccacggtg
aagaggacgtgcatcaagtcgctgcccagcgtgctctgcatccacctcatgcgcttcggc
ttcgactgggagagcggccgctccatcaaatacgacgagcagatccggttcccctgggtg
ctgaacatggagccctacaccgtgtccgggatggcgcgtcaggactgcagcgtggagggc
ggcgagggccgcggcgacggcacctcggggggctcgcccaggaagaaggtcacgatctct
gagaactacgagctggtgggcgtggtggtgcacagcgggcaggcgcacgccggccactac
tactccttcatcaaggaccgccgcggcagcgctcggggccactggtacaagttcaacgac
aacgtggtggaggagttcgacatgaacgacgagactctggagtacgagtgcttcggcgga
gagtaccggcccaaagtgtacgaccagtccaacccgtaccccgacgtgcggcggcgctac
tggaacgcctacatgttgttctaccagaagatcagcgaccagaactcgcccgtcctgccc
aagaagagccgagtcagcatcatgcggcaggaggccgaggacctgacgctctccgccccg
tcgtctcctgacgtttccccccagtcgtctcctcgtcccccgagggccaacaacgaccgg
ctcaccctcctcacccgcctggtgcgcaagggcgagaagaagggcctgttcgtggagaag
atgcccgccagcatctaccagatggtgagggacgagaacctgaagttcatgaggaaccga
gacgtctacaacagcgactacttcaacttcaccctctccctggcctccgtcaacgcaacg
aagctgaagcatccggactaccagcctatggccaaagagagtcttcagctggcggtgcac
ttcctccttcacacctacctgcacaccaaaaagaaactcagggtggacacggaggaatgg
atggccacggtggaggtgctgctgtccaagagctgcgaggcgtgccagtggttggtgcag
tacctgagcggaccagaggggcgcgagatgaccaggatctgcctgctggagtgcagcgtg
agggaggtgcgggtggtggtggcctccatcctggagaggaccctggagagcgcgctgcac
ttcggggacccgggcgtggacgggctgacggacacgctgctgtcgctgctcgacaaagac
gtgcccgagaacgtcaagaactgcacgcagtacttcggcctcttcagcaacttcgctcag
cagggatgcggtccctgtcagctgctgttgaaacactcggcttatcggcggatgctcatc
ttcctgctgggacccaacaggcaaaacaaccagaaccggcgctggagtccggctcaggcc
cgtgagttccttcacctgcacaacacgctggccctcatcacgctgcactgcgacctcaac
gcccagcggacgcaggctcctggagtgtttaaactgcgtgtgagctgcgttccggcctct
actcagctcctccccctccacgccgacatcctggcctcgctcttcactccggagggacag
ccgtaccttctagaggtgatgttcgccatgcgcgagctgtcggggccgctgtcgctcctc
atcgagatggtgacctactcctcctactgcaacgagcccttcagcctcggcgtgctgcag
ctgctcaagacgcagctggagacggcgccgcctcacgagctgaagaacgtgtttcagatg
cttcaggagctgctggtcatggaggacccgctgcagacgcagaggctcaagtacgccttc
gagtcggagaaaggccttttagctttgatgcaccagagcaacaacgttgacagcaggcgc
tgctaccagtgtgtgaagttcctggtcacgttggcccagaagtgtgctccagccaaagag
tacttcaaggacttgtctggtcactggagttgggccgtgcagtggctgcaaaaaaagatg
actgaacattactggactccacagagcaacgtctccaatgagacatccaccaacaaaacc
ttccagcgtaccatctcggcacaggacacgttggcctacgccacggcgctgctgaacgag
aaggagcagtccggcagcagcaacggctccgacggcagcccggccaacgacaacgccgac
cgcagcctccgccaggggtcagaatctcccatgatgctcggcgactcaaagagcgacctg
gaagacgtcgacccctag
DBGET
integrated database retrieval system
