Pseudoliparis swirei (Mariana hadal snailfish): 130194448
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Entry
130194448 CDS
T09868
Symbol
mysm1
Name
(RefSeq) histone H2A deubiquitinase MYSM1 isoform X1
KO
K11865
histone H2A deubiquitinase [EC:3.4.19.-]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pswi01002
]
130194448 (mysm1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130194448 (mysm1)
Peptidases and inhibitors [BR:
pswi01002
]
Metallo peptidases
Family M67
130194448 (mysm1)
Ubiquitin system [BR:
pswi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
130194448 (mysm1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
JAB
Myb_DNA-binding
Prok-JAB
Myb_DNA-bind_7
Myb_DNA-bind_6
Alliinase_C
Motif
Other DBs
NCBI-GeneID:
130194448
NCBI-ProteinID:
XP_056271482
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All DBs
Position
5:25425139..25433210
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AA seq
846 aa
AA seq
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MEDEVEVDIEGDELDPGLREPDGGGLVPEPFMQAAWRSSAGRLPWQLDGSISSENREVIE
RMLLEEQYYLTGEGLPSHIWDDADNKPKAKKSPAKTSASGSAAARWSRQEKDLFEDGLAQ
FGRRWTKIAKLVRSRSTFQVKSYARQYFKHKTKSEPRAAAPPAGPALHPQPPQPTSSRAS
ALTNAVRIEKLSDEEDEEVDITDDLSGAGEDDAGGEPHGELRTRTDLGEPERPADAEEQR
DPGPTSPPPPSPRPSSSLTSPEETGTHNESEPLPPENPERSTNENEDRGSRSEGPAGTGR
PGDARGDDTGKTEPSPADGPEDEEEEEEEEEEEEEEEELLRAPEQEVEMAMETITEEEKR
AIPEFFEGRPSKTPERYLKIRNYILDQWLKSKPRFLNKTSVRPGLKNCGDVNCIGRVHTY
LELIGAVNFNCEQAVYNRPKVVDRSKHKEGRDVMEDYQLAQRLQSMRTRKRRVRDTWGNW
CDSRDLEGQTYEHLSAEELALRREEMKRRQPRPCKTSRFRGSFDPFQLIPCRSFGEGVQE
PFQVIVCAETLLIMDMHAHVSRGEVIGLLGGTFNEEESVLKICAAEPCNSVSTGLQCEMD
PLSQTQACDVLASLGFSVVGWYHSHPTFHPNPSVRDINTQSQFQSYFSRGGAPFIGMIVS
PYDPANPSPHSQTTCLLVKESQGPSGPQNLPYRFDFSSSQDIPDWEQTQRRAQWIIHKYC
QSPGSVQMDRLFRKDSHLTFLEKMLSSLARYLEPLPGEEGDPFLTQIQADFMARQQPSDQ
EEEEQSPRASDSEDFAFDQLIGEEKPPEGGGGRGSDPDSGGASDGSEANGAAVLHLGSVL
SSDYLL
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaggtggaagttgacatcgagggagacgagttggaccccggcctgagggag
ccggacggaggaggtctggtcccggagcccttcatgcaggccgcgtggaggagcagcgcg
ggcagactgccatggcaactggacggctccatcagctcggagaacagggaggtcatcgag
aggatgctgctggaggaacaatactacctgacgggggaggggctgcccagccacatctgg
gacgacgcagacaacaagcccaaagcgaagaagtctccagccaagacgtcggcctccggc
tccgccgccgctcgctggtccagacaggagaaagacctgtttgaggacggactggctcag
ttcggtcgacggtggactaagatcgccaagttggtccgcagccgttcaacttttcaggtc
aagagttatgcccgacagtattttaaacacaagacgaaatcagaacccagagctgcagcg
ccccctgctggccccgcgctgcacccgcagcctcctcagccgacatccagccgagcgtcc
gcgctgaccaacgccgtccgcatcgagaagctctccgatgaagaggacgaggaggtggac
atcaccgacgacctgagcggcgccggcgaggatgacgccggcggggaaccgcacggcgag
ctccgaacccgaaccgacctcggtgagccggagcggccggcggacgcggaggagcagagg
gacccgggtccgacctcgccgcccccgccgagtccccgcccctcgtcttccctcacttcc
ccggaggagaccggcacgcacaacgaatcggagcccctccctccagagaacccggagcga
tcgaccaatgagaacgaagaccggggctcccggtccgagggcccggcggggaccggccgc
ccgggagacgcccgcggcgatgacaccggtaagacggagccgagtccagccgacgggccg
gaagacgaagaggaggaggaggaagaagaggaggaggaggaggaggaagaggagctgctc
agggcgcctgagcaggaagtggagatggccatggagaccatcaccgaggaggagaaacga
gccatcccagagttctttgagggacgtccgtctaaaacgcccgagcggtacctgaagatc
cggaactacatcctggaccagtggctgaagagcaaaccccggttcctgaacaagacgtcg
gtccggcccggcctgaagaactgcggcgacgtgaactgcatcgggcgggtccacacgtac
ctggagctcatcggcgccgtcaacttcaactgcgagcaagcggtctacaaccggccgaag
gtggtggaccgctctaagcacaaggagggccgagacgtcatggaggactaccagctggcc
cagaggctgcagagcatgcggaccaggaagcggcgcgtgcgcgacacctgggggaactgg
tgcgactccagagacctggaggggcagacctacgagcacctcagcgccgaggagctcgcc
ctgaggagggaggagatgaagaggaggcagcccaggccctgcaagacctccaggttcaga
gggtctttcgatcccttccagttgattccctgcaggtcttttggggaaggtgtgcaggaa
cctttccaggtcatcgtgtgtgcagagactctcctcatcatggacatgcatgcccacgtg
tcgcgtggcgaggtcatcgggctgctcgggggaaccttcaatgaggaagagagcgtgtta
aagatctgtgcagccgagccgtgcaacagcgtgagcaccggcctgcagtgcgagatggac
ccgctgtcccagacgcaggcctgcgacgtgctggcgtcgctgggcttcagcgtggtgggc
tggtaccactcgcaccccaccttccaccccaacccctcagtgagggacatcaacacgcag
agccagttccagagctacttctcccgcggcggagcccccttcatcgggatgatcgtgagc
ccgtacgacccggccaacccctccccccactcccagaccacctgcctgctggtgaaagag
agccaggggccctcaggcccacagaatctgccctacagatttgacttctcgtcatcacaa
gacattccagactgggaacagacgcagaggagagctcagtggatcatccacaaatactgt
caatcacccgggagtgtgcagatggacagattattccggaaagactcccacctcaccttc
ctggagaagatgctgtcgtctctggcccggtacctggagcccctgccgggtgaggaggga
gaccccttcctcacccagatccaggccgacttcatggcccggcagcagccgtccgaccag
gaggaggaggagcagtctcctcgcgcctcggactcggaggactttgcttttgatcagctg
atcggcgaggagaagcctccggagggaggaggaggaagaggctctgatccggactctggc
ggagcttcagacggctcggaggcaaacggtgccgcagttttacatctgggctccgtgttg
tcgagcgactatttactgtga
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