Pseudoliparis swirei (Mariana hadal snailfish): 130194450
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Entry
130194450 CDS
T09868
Symbol
zyg11
Name
(RefSeq) protein zyg-11 homolog
KO
K10350
Zyg-11 protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130194450 (zyg11)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
130194450 (zyg11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZER1-like_2nd
LRR_Zer-1
LRR_4
LRR_At5g56370
ELMO_ARM
BAF250_C
Motif
Other DBs
NCBI-GeneID:
130194450
NCBI-ProteinID:
XP_056271486
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All DBs
Position
5:complement(25079986..25089004)
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AA seq
742 aa
AA seq
DB search
MACSFLNTDEASPPALADLCLTHVSQNLECFCVKRPDGSLRFREAMLFPQELADQLLAKM
ATEGLLNDSTVGVFRTCEYLRLRRACVRTARISAEAFQKALCSHRLLELDAARVNADLTI
PDILQGLATNKYCQESLQRLVLTGLTMSSLEEPIGHRFSSLRGLRSLSLANVDFYDSGLA
DVCSLPRLESLDLSNTSVTNLSPLLGLKERLRSLTLHQLKRLEMSTAQLLAVIGQLDALQ
HLDISDDKQFTSDVARQLLGQPGILPALVSLDVSGRKQVTDAAVKAFVEERPGMTFVGLL
ATDAGFSDFLSGEGTLKVTGEAYETQICEALRRYSEREGFVREALFHLFSLTHVMEKPRP
DILKLVVLGMKNHPATLNVQLAASACVFNLTKQDLAAGMPVRLLSTVTQLLLEAMRTFPN
HQQLQKNCLLSLCSDRILQEVPFNRFEAAKLVMQWLCNHEDQNMQRMAVAIISILAAKLS
TEQTAQLGAELFIVKQLLHIVRQKATQGVVDATLKFTLSALWNLTDESPTTCRHFIENQG
LDLFIKVLESFPNESSIQQKVLGLLNNIAEVGELHVELMVQGFLDHISTLLHSPEVEVSY
FAAGILAHLTSRGADAWTLGPELRAELLEQLHDVIMKWPAPECEMVAYRSFNPFFPLLEC
FHTPGVQLWAAWAMQHVCSKNAARYCSMLLEEGGLQQLELVHTNPQTHKDVELLAASILE
SLQRHRGRTGPAPTTGPAPQRK
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggcctgtagtttcctaaacacggacgaggcgtccccgccggctctcgcggacctgtgt
ctgacccacgtgagccagaacctggagtgtttctgcgtgaagcgcccggatgggtcgctg
cgcttcagagaggcgatgctcttcccgcaggagctggcggaccagctgctggccaagatg
gccactgaaggcctgctgaacgacagcaccgtgggcgtgttccgcacctgcgagtacctg
cgtctgaggcgggcctgcgtccgcacggcgcgcatctccgccgaggccttccagaaagcc
ctctgctcccaccggctgctggagctggacgccgccagggtcaacgcagacctcaccatt
cccgacatcctgcagggactggccaccaataaatactgtcaggagtccctccagcgactg
gtcctgacgggcctcaccatgtcctccctggaggagccgatcggccatcgcttcagctcc
ctgcggggcctccgctcgctctccctggccaacgtggacttctacgactccgggctggcg
gacgtgtgctcgctgccgcggctggagagcctggacctgtccaacacctcggtgaccaac
ctgagcccgctgctcggcctgaaggagcggctgcgctcgctcacgctgcaccagctcaag
aggctggagatgagcaccgcgcagctgctggccgtcataggccagctggacgctctgcag
cacctggacatcagcgacgacaagcagttcacctccgacgtggctcgtcagctgctcggc
cagccggggatcctccccgccctcgtgtcgctggacgtgtccgggaggaaacaggtcacc
gatgcggcggtcaaggcgtttgtggaggagaggccggggatgaccttcgtgggacttctg
gccacggacgccggattttccgacttcctctccggagaagggaccctgaaggtcacggga
gaagcctacgagacccagatctgcgaggcgctgcggcgctacagcgagagggaaggcttc
gtgagggaggccctgttccacctgttcagcctcacgcacgtgatggagaagccccgcccc
gacatcctcaagctggtcgtgctgggcatgaagaaccaccccgccacgctgaacgtgcag
ctggcggcgagcgcctgcgtcttcaacctgacgaagcaggacctggcggcggggatgccg
gtgcggctgctgagcaccgtcacccagctgctgctggaggccatgaggacgttccccaac
caccagcagctgcagaagaactgcctgctgtccctgtgcagcgaccgcatcctgcaggag
gttcccttcaacaggttcgaagctgccaagctggtgatgcagtggctctgcaaccacgag
gaccagaacatgcagaggatggccgtggccatcatctccatcctggccgccaagctgtcc
acggagcagacggcccagctgggagccgagctgttcatcgtgaagcaactgctccacatc
gtgcgtcagaaagccacgcagggcgtcgtggacgccacgctcaagttcacgctgagcgcg
ctctggaacctcaccgacgagtcgccgaccacctgccgccatttcatcgagaaccagggc
ctggacctgttcatcaaagtgctggagtccttccccaacgagtcgtccattcagcagaag
gttctcggcctgctgaacaacatcgccgaagtgggggagctgcacgtggagctgatggtg
cagggcttcctggaccacatcagcacgctgctgcacagccccgaggtggaggtcagctac
ttcgccgccggcatcctcgcccacctgacgtcgcggggggcggacgcctggacgctcggc
cccgagctgcgggccgagctgctggagcagctgcacgacgtcatcatgaagtggccagcg
cccgagtgtgaaatggtggcctacaggtcttttaaccctttcttccccctgctggagtgc
ttccacacccccggcgtgcagctgtgggcggcgtgggccatgcagcacgtctgcagcaag
aacgccgctcgctactgcagcatgctgctggaggagggcggcctgcagcagctggagctc
gtccacacgaacccgcagacccacaaggacgtggagctgctggccgccagcatcctggag
agcctgcagcgccacagggggcgcaccggccccgcccccaccaccggccccgccccccag
agaaaatga
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