Pseudoliparis swirei (Mariana hadal snailfish): 130194502
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Entry
130194502 CDS
T09868
Symbol
si:dkey-183n20.15
Name
(RefSeq) RING-HC_RNF170 domain-containing protein
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130194502 (si:dkey-183n20.15)
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130194502 (si:dkey-183n20.15)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130194502 (si:dkey-183n20.15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4_2
zf-RING_2
zf-RING_5
Prok-RING_4
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
130194502
NCBI-ProteinID:
XP_056271567
LinkDB
All DBs
Position
5:24967487..24971476
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AA seq
206 aa
AA seq
DB search
MSRHKGSPRPASGPSGNRDRLCPVCLQTASFPVRTNCGHLFCAPCLMAYWRHGSWLDAIS
CPLCRQKVSELCHLFNETRSDRQSKEVLGEITDYNRRYSGAPRRVTDYLCDAPLLLQLLA
RSLGTVGGLVWLFFFRVAVCCVRTVVSLSSPSLATPPETDPSLCGLLGVLDDLAAVILLL
ICVINIYQQMAPESDGRSRAAMGSSL
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgagccgccacaagggatctccacgtccagcctcgggtccgtccgggaaccgagaccgg
ctttgtccagtctgcctgcagacggccagcttcccagtccggaccaactgcggacatttg
ttctgtgctccctgcctgatggcctactggagacacgggtcctggctggatgccatcagc
tgcccgctgtgccggcagaaggtcagtgagctgtgtcacctgttcaacgagactcgatcc
gaccgccagtcaaaggaagttctcggggaaatcacagactacaaccgacgttattctgga
gccccgcgaagggtgaccgactacctgtgtgacgctcccctcctgctgcagctgctggcc
cgcagcctgggcaccgtcggggggctcgtgtggttgtttttcttcagggtggccgtatgc
tgcgtgcgcaccgtggtgtccctctcctccccctcgttggcaacccccccggagacagac
ccctccctgtgcggcctgctcggggtcctggatgatctggcggcggtcatcctgctcctc
atctgcgttatcaacatctaccagcagatggcgccagagagcgatggacgctcacgagca
gcgatggggagctcgctgtag
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integrated database retrieval system
