Pseudoliparis swirei (Mariana hadal snailfish): 130194621
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Entry
130194621 CDS
T09868
Name
(RefSeq) AP-3 complex subunit beta-2 isoform X1
KO
K12397
AP-3 complex subunit beta
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
130194621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130194621
Membrane trafficking [BR:
pswi04131
]
Endosome - Lysosome transport
Others
AP-3 complex
130194621
Endosome - Golgi transport
130194621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3B1_C
AP3B1_C_2
Cnd1
HEAT_2
MOR2-PAG1_C
Motif
Other DBs
NCBI-GeneID:
130194621
NCBI-ProteinID:
XP_056271615
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All DBs
Position
6:5427727..5470899
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AA seq
1117 aa
AA seq
DB search
MSASSAFNDEKGGSSSVGEPEYGHDPASGGIFSSDYKRHDDLKEMLDSNKDSLKLEAMKR
IVAMIARGKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLK
DPNQLIRASALRVLSSIRVTIIVPIMMLAIKEAASDMSPYVRKTAAHAIPKLYSLDPEQK
DQLIEVIEKLLADKTTLVAGSVVMAFEEVCPERIDLIHKNYRKLCNLLIDVEEWGQVVII
NMLTRYARTQFLNPNMNESLLEEENDKTFYGSDDDEEEEKEKKAEAPLPRRKPYVMDPDH
RLLLRNTKPLLQSRNAAVVMAVAQLYFHLAPKVEVGVIAKGLVRLLRSHSEVQYVVLQNV
ATMTIKRRGMFEPYLKSFYIRSTDPTQIKVLKLEVLTNLANETNISTILREFQTYIKSMD
KDFVAATIQAIGRCATNIGEVRDTCLNGLVQLLSNRDELVVAESVVVIKKLLQMQPEKHS
DIIKHMAKLTDNIQVPMARASILWLIGEYCEHVPKIAPDVLRKMAKSFTNEEDIVKLQII
NLAAKLYLTNSKQTKLLTQYVLNLAKYDQNYDIRDRARFIRQLIVPTEKSGALSKYAKKL
FLALKPAPVLESPFKDRDHFQLGSLSHLLNAKAGGYQELPDWPEAAPDPSVRNVEVKDSV
FSLLERVATLTSVPEWTKCSSREKRKEKKVEKPFYSDSEGESGPTESADSESDSASGSEI
GSGVVGSGSRTASEESEEGSESEEEEEKDKKMMTAKKELKKPVQESESEQSSEEEEERKR
ERKKSKPRKSESDDDDDSESESSRSESEDSESEAEVKKKKKAAASRPPAKPLKKESKKEM
SLLDFDDFEPAPPPHVTPLNSFLSSSLVTDLEGLSLSDAALSPATLSPSGAMKSYELLHR
IRGEGLSVEYCFSRQPFSPDANMVAVQMQFTNSGAADTKSLHMEDVKLQSGMRVKEFPEI
ELLPAGETATAVMGIDFCDSTQAANFQLCTHTKKFFVSIQPPVGELMRPVFLTENEFKKE
QGQLMGMNELSEKLTLDAECRNEHAIVQRVTAAANLSRVPCGSDKECRFAGRTVTSGSLV
LATVVTKEAASAQLTVNCEKMVIGTMLVKDVLLALTQ
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccagctccgctttcaacgacgagaaggggggctcgtccagcgtcggggagcct
gaatatggtcacgacccggcgagcggagggattttctcgtccgactacaaaagacacgac
gacttgaaggagatgctggacagcaacaaagactccctgaagctggaggcgatgaagcgc
atcgtggctatgatcgcccgggggaaaaacgcgtcggatcttttccccgccgtggtgaaa
aacgtggcctgtaaaaacatcgaggtgaagaagctcgtctacgtttacctggtgcgttac
gccgaggagcagcaggacctcgctttgctctccatctccaccttccagcgagggttgaag
gatccgaaccagctgatcagagccagcgccctgcgagtcctttccagtatccgagtcacg
atcatcgtccccataatgatgttggccatcaaagaagccgcctccgacatgtctccgtac
gtcaggaagacggccgctcatgccatcccgaaactctacagtttggatccagaacagaag
gaccagctgattgaagtcatagagaaactcctcgctgacaaaaccacattggtggcggga
agcgtcgtcatggctttcgaggaggtgtgtccggagcgcatcgacctgatccacaagaac
taccggaagctgtgcaacctcctcatcgacgtggaggagtggggccaggtcgtcatcatc
aacatgctgacccgctacgccaggacccagttcctcaaccccaacatgaacgagtcgctg
ctggaggaggaaaacgacaagaccttctacggctcggacgacgacgaggaagaggagaag
gaaaagaaggcggaggctcccctgccgaggaggaagccgtacgtgatggaccccgaccat
cggctgctgctgaggaacaccaagccgctgctgcagagccgcaacgccgccgtggtgatg
gctgtggctcagctgtatttccatctggcccctaaagtggaggtgggggtgattgccaag
ggcctggtccgtctcctgaggagccacagtgaagtccagtatgtggttctgcagaacgtg
gccaccatgacgattaagagacggggaatgtttgagccgtacctgaagagcttctacatc
cggtccacagacccgacgcagattaaagtcctcaagctggaggttctcaccaatctggcc
aatgagacgaacatttccaccatcctcagagagtttcagacttacatcaagagcatggat
aaagactttgtggccgccacgattcaagccatcggccgctgtgccacgaacatcggcgag
gtgagggacacgtgtctgaacggcctggtgcagctgctgtccaaccgggacgagttggtg
gtggcggagtcggtggtggtcatcaagaagctgctgcagatgcagccggagaagcacagc
gacatcatcaagcacatggccaagctcaccgacaacatccaggtgccgatggcgcgggcc
agcatcctgtggctgatcggcgaatactgcgagcacgtccctaagatcgcccccgacgtc
ctgcggaagatggccaagtcgttcaccaacgaagaagacatcgtcaagctgcagatcatc
aatttggccgccaagctctatctcaccaactccaaacagaccaaactgttgacgcagtac
gttctcaacttggccaagtacgaccagaactacgacatccgcgatcgggcgcgcttcatt
cgtcagctcatcgtgcctacggagaagagcggcgcgctgagcaagtacgccaagaaactg
ttcctcgccctcaaaccggcgccggtgctcgagtctccatttaaagatcgagaccacttc
cagttgggctcattgtcccacttgctgaatgccaaggccggcggctaccaggagctgccc
gactggcccgaagccgcccccgacccctccgtgcgcaacgtggaggtgaaggattctgtt
ttttcgctgcttgaaagagtcgcaacattaacgagtgtgcccgagtggaccaagtgcagc
agccgagagaagaggaaggagaagaaggtggagaagcccttctactccgactcggagggc
gagtccgggccgacggagtcagctgacagcgagtcggactcggccagcggctcggagatc
ggcagcggcgtcgtggggagcggctcgcgaacggcgagcgaagagagcgaggaaggctcc
gagtctgaggaagaggaggaaaaggacaagaagatgatgacggcgaagaaagaattaaag
aagccggtgcaagaaagcgaaagcgagcagagcagtgaagaagaagaagagaggaagcgc
gagaggaagaagagtaaaccgcgcaagagcgaatccgacgacgacgacgacagcgagtct
gagagcagccgatcggagtccgaggactccgagtctgaggcagaggtcaaaaagaagaaa
aaggcagctgcctccagacctcctgctaagccgctcaagaaagagagcaagaaagaaatg
tccctgctggacttcgatgacttcgagccggctccgccccctcacgtcactcctctcaac
agcttcctgtccagcagcctggtgaccgacctggagggcctgtctctgtctgacgccgcg
ctctctccggcaaccctttccccctccggcgcgatgaagagctacgagctgctgcaccgg
atccgcggcgagggtctgtcggtggagtactgcttcagccggcagccgttcagccccgac
gccaacatggtggccgtgcagatgcagttcaccaacagcggcgccgcggacaccaagagc
ctgcacatggaggacgtgaagctgcagtccggcatgagggtcaaggagttcccggagatc
gagctgctgccagcaggcgagacggcgacggctgtgatgggcatcgatttctgtgactcg
acgcaagcggcgaacttccagttgtgcactcacaccaagaaattcttcgtgtcgatccag
ccgccggtcggggagctgatgaggcccgtcttcctgacggagaacgagttcaaaaaggag
caaggtcagctgatgggcatgaacgagctgtcggagaagctcaccctagacgccgagtgt
cggaacgagcacgccatcgtccagagggtgaccgccgccgccaacctcagccgggtgccc
tgcggctcggacaaggagtgcaggttcgcgggccgcacggtgaccagcggcagcctggtg
ttggccaccgtggtcaccaaggaggcggcctccgcccagctgacggtcaactgcgagaag
atggtaatcggcacgatgctggtgaaggacgtcctgctggcgctgacgcagtga
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