Pseudoliparis swirei (Mariana hadal snailfish): 130194677
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Entry
130194677 CDS
T09868
Symbol
ptprz1a
Name
(RefSeq) receptor-type tyrosine-protein phosphatase zeta isoform X1
KO
K08114
receptor-type tyrosine-protein phosphatase zeta [EC:
3.1.3.48
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pswi01009
]
130194677 (ptprz1a)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pswi00535
]
130194677 (ptprz1a)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
130194677 (ptprz1a)
Protein phosphatases and associated proteins [BR:
pswi01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
130194677 (ptprz1a)
Proteoglycans [BR:
pswi00535
]
Cell surface proteoglycans
Others
130194677 (ptprz1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Carb_anhydrase
fn3
Tc-R-P
PTP-SAK
DSPc
PTPlike_phytase
PTP-NADK
Y_phosphatase3
GUN4_N
Motif
Other DBs
NCBI-GeneID:
130194677
NCBI-ProteinID:
XP_056271687
LinkDB
All DBs
Position
6:complement(1908712..1985763)
Genome browser
AA seq
1503 aa
AA seq
DB search
MEPTRCCLAALLILLCQQAGGYSYRNQRKFSEDIDWSYAGTLNQDNWAKKFPSCSNAKQS
PIDIQEDLAPAKLQYQDLTFEGWESPTSGRTTIKNDGKTVAVDVDGEFYVSGGGLRSKFK
VGRITFHWGRCNASSEGSEHSLDGVKYPLEMQIYSYEEHRFASLDEAVTAGGKITALAVL
LETSVDDNVNFAAVIDGVRSVSRYGKSAAVPPFAPRGLLPNATDRYFIYNGSLTSPPCSE
TVEWIVFKSAATVSDQQLELFCEVMTMQQAGYVMLMDYLQNNYREQQPFMGQVFSSYTGT
EQLLTPVCSSEPENLQAVPHNRSSLLVTWERPRAVYAASIEKYSVTYRPAHLESSASSTY
LTDGDQDVGAMLDDLLANSSYAVQVVAVCTDGLRGQRSGLLEVHMPARDPEIDVNPDEYE
DEGTYEPDPFWAHPVQTEDDGLSWTPTDPPRSSGPLVPPLGAGTPTEEPGLRRTSTADPV
PPVGPSRSGHAEEAGPRSTATRPPGAAAQTTGGAEFSGHAPFLSTTGGAPTELGGLIPTE
KTNAVAPPTAQAPPTSPTLASVETKGKSLSSSGATTTPSPFFVDEDDAASGVGVSPGPGG
LQTAASPPAEAPPPRSPSTTTSVRSGGVLSLTTQPMSNATPPTGGGDPGNSTAALRSSAL
PPPATDASGVASGSALFPVDPDWDAVQASASGESAPLPHWTEASSSASGASPDDADGRSS
AFYFDSESGSAAAASEAGGVTPAAAAPPPVAPATWAPPGEEEEQEEEQSGSGQRGDIETS
SDFSISEHTERGSEGEEPVADANSSSHESRVGALGGRRAVVPLAVISTLTGLGLLVLIGI
LVYWRTCFQTAHFYIDDNSSPRVIAAPPSGLTPDAHTSFPVKQFVEHVAELHDTNGFQRE
FEILKESYEEVQACTVDMTTDGSNHPDNQSKNRYSNILAYDHSRVRLSAPADKDGKTGDY
INANYVDGFKKPRSYIAAQGPLKSSTEDFWRMIWEQNVGVIVMITNLVEKGRRKCDQYWP
AEAQEEYGGLLVTLRSSRALAHYTQRTFGLRNVLAKKASQKGRSLERTVTQYQFTQWPDM
GVPEFTLPLLSFVRKSSRARTEDQGPVVVHCSAGVGRTGTYVVLDSMLTQMRDEGHVNIT
GFLKHIRTQRNDLVQTEEQYVFIHDALAEAVASGDTEVAAARLHRYVDELLTPVAAGRTR
LDQQFTLLCDSGVKRCDFSAALQDGNRGKNRKCSAVPVERSRVRLSLAAGETSDYINASY
VSGYRQSSEFIITQNPLPGTFKDFWRMLWSHSAQVVVSLVGTPSAETPEEEAKEAELRVI
WPRKGQPISYETFTVTQRSETHICLTNEDMLVVQDYVLEATKDDFALEVKRYRAPRWPNP
DGPVSNTFELLNLVKESAARDGPVVVHDDVGGATAATFCALSSLTRQLEAEGSVDVFQVA
KLTNLMRPGAFSDIEQYRFLYTAMLSLIGKQEDKKTLESSDDDSTFVVVGTASAAAESLA
SLV
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atggagcctacgcgctgctgcctggcggcacttctcatcctcctgtgtcaacaagctgga
ggatactcctacaggaatcaacgcaagttctcagaggacatcgactggtcgtacgcggga
accctgaaccaggacaactgggccaagaagttcccgtcctgcagcaacgccaagcagtcg
cccatcgacatccaggaggacctggcgccggccaagctgcagtaccaggacctgaccttc
gagggctgggagagtcccacgagcggcaggaccaccatcaagaacgacggcaagaccgtg
gcggtcgacgtggacggagagttctatgtgagcggcggcggcctgaggtcaaagttcaag
gtgggacgcatcaccttccactgggggcgctgcaacgcgtcgtcagagggctccgaacac
agtctggatggagtcaagtaccctctggagatgcagatctacagctacgaggagcatcgc
ttcgcctccttggacgaggcggtgacggccggagggaagatcacggcgctggccgtgctg
ctcgagacgagcgtggacgacaacgtgaacttcgccgccgtcatcgacggcgtgaggagc
gtgagccgatacggtaagagcgccgcggtcccgcccttcgcgccgcgaggcctcctgccc
aacgccacggaccgatacttcatctacaacggctcgctgacctcgccgccctgcagcgag
accgtcgagtggatcgtcttcaagagcgcggcgaccgtgtccgaccaacagctggagctg
ttctgcgaggtgatgacgatgcagcaggccggctacgtgatgctgatggactacctgcag
aacaactaccgcgagcagcagcccttcatgggccaggtgttctcctcctacaccggcacc
gagcagctgctcacgcccgtgtgcagctctgagccggagaacctgcaggcggttcctcac
aaccgcagcagcctgctggtgacgtgggagcggccgcgggcggtgtacgccgccagcatc
gagaagtactccgtcacctaccgaccggcccacctggagagctccgcctcctctacgtac
ctgacagacggggaccaggacgtgggggcgatgctcgacgacctgctggccaacagcagc
tacgcggtgcaggtggtggcagtgtgcaccgacggcctgcgggggcagcgcagcggcctg
ctggaggtccacatgccggcacgcgaccccgaaattgatgtgaatcctgatgaatacgaa
gacgagggtacctatgaacccgacccgttctgggcccatccggtccagactgaggacgac
ggtctctcctggacccccaccgaccccccgaggtcctccgggcctctggttcctccgctc
ggcgccgggaccccgacggaggaacccggtctgaggagaacctccacggccgacccggtt
ccccctgtcggaccctcccggtccggccacgccgaagaggcggggccccgcagtaccgcc
acgcgtccaccgggcgccgcggcacaaaccacgggaggagccgagttcagtggccacgcc
ccttttctctccacgaccgggggagccccgacggaactcggaggtttgattccgacagag
aaaacaaacgctgtggctcctcccactgctcaggctcctcccacttctcccacactcgcc
agcgtggagacgaaaggtaaaagtctttcttccagcggcgcgacgacaacgccgtcgccg
ttcttcgtggacgaggacgacgccgcctccggcgtgggcgtgtccccgggtcccggaggt
ctccagaccgccgcctcccccccggctgaagcccctcctcctcgctcgccgtccaccacg
acctccgtccggtcgggtggcgttctctcgctgaccacgcagccgatgtccaacgccacg
ccgccgaccggcggcggggatcccgggaactccaccgccgcgctccgaagctccgccctc
cctcccccggccacggacgccagcggcgtcgcctcgggctccgccctgttccccgtggat
ccggactgggacgccgttcaggcctcggcctccggagagagcgcgccgctccctcattgg
accgaggcctcgagctccgcctccggcgcgtcccccgacgacgcggacggccgctcctcg
gcgttctacttcgatagcgagagcggcagcgccgccgccgcctcggaggcgggaggcgtg
acgccggcggcggccgctcctcctcctgtggcgccggcgacgtgggctccgcccggcgag
gaagaggagcaggaggaggagcagagcggctcggggcagcggggcgacatcgagacgtcc
tccgacttcagtatctccgagcacacggaaagagggtcggagggggaggagcctgtcgca
gacgccaacagcagcagccacgagtccagagtcggggccctcgggggccggagggccgtg
gtcccgctggccgtcatctccacgctcaccggcctcggcctgctggtcctcatcggcatc
ctggtctactggaggacctgttttcagacggctcacttctacatcgacgacaactcgtca
ccgagagtcatcgccgcaccgccttctggattgacacctgacgcacacacgtctttcccc
gtgaagcagtttgtggaacacgtggccgaactccacgacaccaacggcttccaacgagag
tttgagatactgaaggagagttacgaggaggttcaggcgtgcacggtggacatgacgacc
gacggctccaaccaccccgacaaccaaagtaaaaaccgatacagcaacatcctggcctac
gaccacagtcgagtgcgactctcggcgccggcggacaaagacgggaagacgggcgactac
atcaacgccaactacgtggacggttttaagaagccgcggtcgtacatcgccgctcagggg
cccctgaagtcgagcaccgaggacttctggcggatgatctgggagcaaaacgtcggcgtc
atcgtgatgatcaccaacctggtggagaaggggcggaggaagtgcgaccagtactggccg
gcggaggcgcaggaggagtacggcggcctcctggtgacgctgaggagcagcagggcgctc
gcccactacacccagaggaccttcggcctgaggaacgtcctcgccaagaaggcctcccag
aaggggcggagcctggagcggacggtgacccagtaccagttcacccagtggcccgacatg
ggcgtgccggagttcaccctgccgctgctgagcttcgtccgcaagtcgtccagagcccgg
accgaggaccagggccccgtggtggtgcactgcagcgccggcgtgggccggaccgggacg
tacgtggttctggacagcatgctgacgcagatgagggacgaaggccacgtcaacatcacg
ggcttcctgaagcacatccgcacgcagaggaacgacctggtccagaccgaggaacagtac
gtgttcattcacgacgccttggcggaggccgtcgcgtccggggacacggaggtggcggcg
gcccggctgcaccgctacgtggacgagctgctgaccccggtggctgctgggaggacgcgg
ctggaccagcagttcacgctgctctgtgactccggagtgaagcgctgcgacttctctgca
gctctgcaggacggcaaccgcggcaagaacaggaagtgctccgcggtgcccgtcgagagg
tcacgtgtgcgcttgtctctggcggcgggggaaacgtccgactacatcaacgcatcatac
gtatccggttacaggcagagcagcgagttcatcattacccagaatcctttgcccggcacc
tttaaggacttctggaggatgctttggagccacagcgcccaagtggtggtgtcgctggtg
gggacgccgtcggccgagacgcccgaagaggaggcgaaggaggcggagctacgtgtcatc
tggccacgtaaagggcagccaatcagctacgagacgttcaccgtcactcagaggagcgag
acccacatctgcctgaccaacgaggacatgctggtggtccaggactacgtactggaggcg
acgaaggacgactttgccctggaggtgaagcggtaccgggccccccgctggcccaacccg
gacggcccggtcagcaacaccttcgagctgctcaacctggtgaaggagagcgccgccagg
gacggccccgtcgtggtgcacgacgatgtgggaggagccacggcggcaacgttctgcgcc
ctgtcgtctctgacgcgccagctggaggccgaaggctcggtggacgtcttccaggtggcc
aagctgacgaacctcatgagaccgggagccttcagcgacattgagcagtaccgattcctg
tacaccgccatgctgagtctcatcgggaaacaggaagataagaagaccctcgagtcctca
gacgacgacagtaccttcgttgtggtgggaaccgccagcgctgctgcagagagcctggcg
tccctggtgtaa
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