Pseudoliparis swirei (Mariana hadal snailfish): 130194694
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Entry
130194694 CDS
T09868
Symbol
chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130194694 (chd2)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
130194694 (chd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
130194694
NCBI-ProteinID:
XP_056271726
LinkDB
All DBs
Position
6:13582040..13605814
Genome browser
AA seq
1829 aa
AA seq
DB search
MIVHACSNFLTVNTRTKDHPIKDYQDTTMMKTKSKKQEEEGSTQSNASSNSASEESNRSA
SESASRSESEHGIERRRSHNSESNSSSESECHSESESESAESKSQQTSAEVKDKPVRKKE
RLADVKKMWDEHPDVYGVRRSNRSRQEPARLNIGAGGSSDSESESPKRKTSRAKKKEDIW
NSNDEDEEEEASDSTDSEQEEKKVRSRRLPARRPQTKSSTNKKQPSQKSRKSRKQDSSAE
EDDDDDDDTPKRQTRRRGATNVKSYKEDQHDIETDSDDLIEMVGEAGEELLDEDSETIEK
VMDTRTGKKGATGASTTGYSVQENGDPSEGFDPENDEGETHYLIKWKGWSYIHNTWESMD
SLLQEKVKGLKKLDNYKKKQEELNSWLNRVSPEDVEFHNCQQELVSDLNKQFHIVERIIA
IKTAKTPASSDFPSHSHKTPSSNEPEYLCKWMGLPYSECSWEDGALIGKKYQRCIDSFMN
RNSSKTFPSKDCKVLKQRPRFVPLKKQPSYIGDDNLQLRDYQLDGVNWLAHSWCRCNSVI
LADEMGLGKTIQTISFLSYLFNQHQLYGPFLVVVPLSTLTSWQREFDSWAPHMNVVVYLG
DVMSRKSIRDYEWVNHQTKRIRFSTLLTTYEIVLKDKGVLGNINWAVMSVDEAHRLKNDD
SLLYKSLMEFRSNHRLLITGTPLQNSLKELWSLLHFLMPDKFDSWEDFDEVHGKGTDNGY
QSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVDMTAQQKQFYKWILTRNYRALYKGPRG
SSSGFLNIVMELKKCCNHSFLIKQPEDVDGETQQEHLQSVVRGSGKLVLLDKLLTRLRER
GNRVLIFSQMVRMLDILAEYLAKNRYPFQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLS
TRAGGLGINLASADTVVIYDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDII
ERAKKKMVLDHLVIQRMDTTGRTVLDSNSGNTNSNPFNKEELTAILKFGAEELFKEAEGE
ESEPQEMDIDEILRLAETRESDQGSSATDELLSQFKVANFSSMEESVPEFVDRSIREWDD
IIPEEQRRKIEEEEKQREMDDIFLLPRSRSSNKRAQANDSDSDVGSKLKNRSSGSESETD
DSDDDKRPKKRGRPKARKNHVEGFTDAEIRRFIKAYKKFGCPLDRLEAIARDSELVDKSI
ADLKRLGELIHTSCVTAVQEHEEHLKENPAEAKGPGKRRGINIKISGVQVNAKSIIQHEE
EFEPLHKVVPSNPAERNKFNLTCRVKIAHFDFDWELQEDVQLLLGIYEHGFGNWDLIKTD
PDLKLADKILPDDLNKKPQAKQLQARAEYLLKLLKKEQDSTDLSKTVQEVKVKKRKPRVK
KENKILKDEQGNDISSPRLSDNPSEEGEVKDDGTEKSPAKKRQKKKDNKENKEKQGTPKK
QKGKEKKVAKPKKEKAKGAKGKKTDGPVHITAGSDPVPIEGKEDDELDQDTFSVCKERMR
PVKKALKQLDKPDEGLSDQDQLQHTRTCLLKIGDRITECLKAYSDPEHVKIWRRNLWIFV
SKFTEFGARKLHKLYKMAQKKRSHEEEKEQKKKDSGGRGKNFRPESCGSSRDSTGNQSSS
KPGSHSTQAGPHGHHRESYNSANKRHFGNDDRGDWQRDRKYNYPSNSNPSWQGDRHHPYD
RYKDHYGDHYGDRRPHGDSYRSSGSYRNNSPPRKRPYEQYDNDRDHRGHRPYYDRHSDPK
RRRSDEFRPNYHQGREGPLQDFRRMPEQRPMGPPGPEHYSRPFHPNKPPPPQDPRSPQAH
RSPQNSRSSLERPAEPNATAEPSWNNRKT
NT seq
5490 nt
NT seq
+upstream
nt +downstream
nt
atgatagttcatgcctgctctaactttttgacagtaaataccaggacaaaagatcatcct
atcaaagattatcaggatactaccatgatgaagactaaaagtaaaaaacaagaggaggaa
ggatcgactcaaagcaatgcatcaagcaattcagcctcagaggaatccaaccgctcggcg
tcggagtcggcaagtcgttcagagagcgagcatggcatcgagaggaggagatcccacaac
tctgagtcaaacagctcctcagagtccgagtgtcactctgagtcggagagcgagtctgca
gagtccaaatcacagcaaacctcagcggaagtgaaagacaagccagttagaaagaaggag
cgactggcagacgtgaagaagatgtgggacgaacatccagatgtttatggagtcaggcgg
tcgaatcgcagtcgacaggaaccggctcgtttaaatattggagctgggggcagcagtgac
tctgagagtgaaagtcccaagagaaaaacctcccgagctaagaaaaaagaagatatctgg
aactcaaatgatgaagacgaggaggaggaggcttccgacagtacagacagtgagcaggaa
gagaaaaaagttagatccagacgacttcctgctagaagaccgcagaccaaatcatcaacc
aacaaaaagcaaccgtctcaaaaaagcaggaagtccaggaaacaggactcatctgctgaa
gaagatgacgacgacgatgacgacactccaaagagacagactcgaagaaggggtgcaaca
aatgtcaaaagttataaagaggaccaacatgacattgaaaccgactctgatgacctgatt
gaaatggtgggggaggcaggcgaggagctgctggatgaagacagtgagaccattgagaag
gttatggacaccaggaccgggaaaaaaggagccaccggggcctccacgactgggtattct
gtgcaggagaatggggacccgagtgaaggctttgaccccgagaacgatgagggggagact
cactatctgatcaagtggaagggctggtcctacatccacaacacgtgggagagcatggac
tctctgctgcaggagaaggtcaagggcctaaagaagctggacaactacaaaaagaaacag
gaagagctcaattcatggttgaacagggtgtcgcctgaggatgtagaatttcacaactgc
caacaggagctcgtatcggacctgaacaagcagtttcacattgtggagcgcattatcgca
ataaaaacagcaaagacaccagcgtcctctgactttccctctcatagtcacaagacaccc
tcctccaatgagccagagtatctgtgcaagtggatgggcttgccctattccgagtgcagc
tgggaggatggagctttgattggaaagaagtatcagcgctgcatcgacagcttcatgaac
cgaaactccagcaaaaccttcccctccaaagactgcaaggtgttaaagcaaagaccgagg
tttgttcctctgaagaaacaaccatcgtacattggagatgataaccttcaactgagagat
tatcagctggacggcgtgaactggttggcccactcctggtgcaggtgcaatagcgttatc
ctcgctgatgagatggggctgggaaagaccatccagaccatctccttcctgtcgtacctg
ttcaatcagcatcagctgtatggacccttcttagtggtggtccctctgtccacactcacc
tcctggcagagggagttcgactcctgggctcctcacatgaacgtggtggtctacctcggt
gatgtcatgagcaggaaatcgatccgtgactacgagtgggtgaaccatcaaacgaaaaga
atccgtttcagtacactattaaccacctatgaaattgtactcaaagacaagggggtgctt
gggaacatcaactgggcggttatgagtgtggatgaagctcacaggctgaagaacgacgac
tccctgctgtacaaatcattgatggagttcaggtctaaccacaggctcctcattaccggg
actccgctgcagaactccctcaaagagctctggtcactgttgcacttcctcatgcctgac
aagtttgattcctgggaggattttgacgaagtacacgggaaaggaacggataacggttat
cagagtctccacaaagtcctcgagcccttccttctgcgacgtgttaagaaagacgtggag
aaatcgcttccggccaaagtcgaacagattctccgtgtagacatgactgcacagcaaaaa
caattctacaagtggattttaacgaggaattatagagctctttacaaaggcccccgaggc
agctcctctggcttcctgaacatagttatggagcttaaaaagtgctgcaaccacagtttt
ctcattaaacagccagaggatgtcgacggtgaaacccaacaggaacacctgcagagtgtc
gtgaggggcagtgggaagctggtgctgctggacaagctgctgaccagactccgagaaaga
ggcaaccgagtcctgatattttcccagatggtcaggatgttggacattctggctgaatac
ctcgccaagaatcgctacccattccagcggctggacggttccattaagggagaaatacga
aagcaagcactcgaccactttaatgcagaaggctcagaggacttctgcttcctgttgtcc
accagagctggaggtttagggatcaatttggcctcggcagacaccgtcgtcatctatgac
tctgactggaaccctcaaaatgatctgcaggcacaagccagggctcaccggatcggccag
aagaaacaggtgaatatttatcgactggtcaccaaagggacagtggaggaggacatcatt
gagagggcaaagaagaagatggtcttggaccatcttgtcattcagagaatggacaccact
ggtcggactgttcttgacagcaactcaggaaacacaaattcaaacccattcaacaaagaa
gaactgaccgccatcctcaagtttggtgcagaggagcttttcaaagaggcagaaggagag
gagtctgagccacaggagatggatatcgatgagatcctgaggttggctgaaacgagagaa
agtgaccagggctccagtgctacggatgaacttctatctcagttcaaggttgccaatttc
tcgagcatggaagagagcgttccggagtttgtggataggtccatacgggaatgggatgat
atcatccctgaagagcagcggcggaaaattgaggaggaggagaagcagcgggagatggat
gacatcttcttgctgcccagaagcagaagctctaacaagagggctcaggcaaacgatagc
gacagtgatgtgggctccaagctgaagaaccgctcctcaggctctgaaagtgagactgat
gacagtgatgacgacaagaggccaaagaagagaggccggcccaaagcccgcaaaaaccat
gtggagggtttcactgatgcagagatccgcaggttcattaaggcatacaagaaatttgga
tgtccactcgacaggttggaggccatcgcccgagactctgagctggttgacaaatccatt
gccgacctgaagagacttggcgaactgattcacacgagctgtgtgactgcagtgcaggag
cacgaggagcacctcaaagagaacccagctgaagctaaaggtcctgggaagcggcgagga
attaacatcaagatctcgggagtgcaggtcaacgccaagtccatcatccagcacgaggaa
gagtttgagcctctgcacaaagtggtgccgtccaatcctgctgagaggaataagttcaat
ctgacatgcagagtgaagatcgcccactttgacttcgactgggagctgcaggaggacgtg
cagctcttgctcggtatctatgagcacggctttggcaactgggatctgatcaagacggat
cctgaccttaaactcgctgacaagattctcccagacgacctaaacaagaagcctcaggcc
aagcagttgcaggcgagagccgagtatcttctcaagctgctgaaaaaagaacaagacagc
acggacctgtctaaaacagtgcaggaggtcaaagtgaagaagaggaagcctcgggttaaa
aaggagaacaagattctcaaggatgagcagggcaacgacatctcctccccccgcctgtcc
gacaacccgtcggaggagggcgaggtcaaggatgatggaacagagaagtcccccgccaag
aaaagacaaaagaaaaaggacaacaaagagaacaaagaaaaacagggaactcctaaaaag
cagaaggggaaagaaaagaaggttgccaagcccaaaaaagaaaaggctaaaggagctaaa
gggaagaaaactgacggtccagttcacataacggctgggtccgaccccgttcccatcgaa
gggaaggaggatgatgaacttgaccaggatactttcagtgtttgtaaggagcgcatgagg
ccggtgaagaaggccctgaagcagctggataaaccagacgagggtctgtctgaccaggac
cagctccagcacactcgcacgtgcctcctgaagatcggagaccggatcacagagtgcctt
aaagcctacagtgaccctgaacatgtcaaaatatggcggagaaacctctggatttttgtg
tccaagttcaccgagtttggtgccaggaagcttcacaagctttacaaaatggctcaaaag
aagcgatctcacgaggaagagaaggagcagaagaagaaggattctggagggagggggaaa
aacttccgcccagagtcctgtggttccagtagagactccacgggtaatcagtcgtcctct
aaaccgggatctcactcgactcaggcgggcccccacgggcaccaccgggagtcatacaac
tcggctaataagaggcactttggcaatgatgatagaggagactggcagagggaccgtaag
tacaattacccgagtaacagcaacccgtcgtggcagggagaccgacatcatccgtatgat
cgctacaaggatcactacggggaccactacggggaccgccggccacacggagactcgtac
cgcagctcaggcagttaccgcaacaacagcccccctcgaaaaaggccgtacgagcagtac
gacaacgaccgggaccacaggggtcatagaccctattatgacaggcattcggatcccaaa
agaaggcgttctgatgagttccgtcccaactaccaccagggcagagaaggccctcttcag
gacttccggaggatgccagagcagaggcccatgggtcctcccgggccagaacactacagc
aggcccttccaccccaacaagcctcccccgccgcaggaccctcgctccccgcaggctcac
aggtctccccagaactcccgctcctcactagagcggcctgcagagcccaacgccacagca
gaaccgagctggaacaacaggaaaacataa
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integrated database retrieval system
