Pseudoliparis swirei (Mariana hadal snailfish): 130194721
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Entry
130194721 CDS
T09868
Symbol
tjp1b
Name
(RefSeq) tight junction protein ZO-1 isoform X1
KO
K05701
tight junction protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04382
Cornified envelope formation
pswi04517
IgSF CAM signaling
pswi04520
Adherens junction
pswi04530
Tight junction
pswi04540
Gap junction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130194721 (tjp1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
130194721 (tjp1b)
04530 Tight junction
130194721 (tjp1b)
04540 Gap junction
130194721 (tjp1b)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
130194721 (tjp1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130194721 (tjp1b)
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
130194721 (tjp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
ZU5
PDZ_6
CARD
Guanylate_kin
PDZ_2
SH3_2
SH3_1
Motif
Other DBs
NCBI-GeneID:
130194721
NCBI-ProteinID:
XP_056271767
LinkDB
All DBs
Position
6:complement(10653240..10718855)
Genome browser
AA seq
1938 aa
AA seq
DB search
MHLLSFRNCIDRVVEEVLVGPLNSKMFGSVSKKWFVKKQKRHQHRSGRRPCTRKKKRWAS
KILKRHRQKILSELDVSAVLPYLVYDKVFTLGEYKEILGHESSKKRTEVFLDHLSCKGPA
AFCSFCSVLEEECPHLLTSFLLDEKDGAPRQARNGGLPVPPNSPGEQPLCSPPTYTDPVF
DSRIHPSPTAGSITGSSVSTIQGKPSLRRIKGRIHRSKSLDSLDLLDSHSAAMEETVIWE
QHTVTLHRAPGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPADGLLQENDRVVMVNA
VSMDNVEHAYAVQQLRKSGKIAKITIRRKRKVHVPMGRLGERETMSEHDEEEDSYDEEIY
ETRSGRSAAYSGVGGAMSRRSGRSSGRRDRRRERSGSRERSLSPRLDRHSHNLPPRPAKI
TLVKSRKNEAEYGLRLASHIFVKDISPESLAARDGNIQEGDVVLKINGTVTENLSLIDAK
KLIERSKGKLKMVVQRDDRATLLNIPDLDDSIASANASDRDDISDIHSLASDHSNRSHDR
HRSSRSRSPDRRSEPSDHSRHSPPQISNGSSHRSRDDERSSKPSSTPVKLPEDVPLPKPK
EAAVAREEKQLPPLPEPKPVYAQPGQPDVDLPVSPSDAPMPSAAHDESILRPSMKLVKFR
KGESVGLRLAGGNDVGIFVAGVLEDSPASKEGLDEGDQILRVNNVDFSNIIREEAVLFLL
DLPKGEEVTILAQKKKDVYRRIVESDVGDSFYIRTHFEYEKESPYGLSFNKGEVFRVVDT
LYNGKLGSWLAIRIGKNHQEVERGIIPNKNRAEQLSSVQYTLPKTAGGDRADFWRFRGLR
SSKRNLRKSREDLSSQPVQTKFPAYERVVLREAGFLRPVVIFGPIADVAREKLAREEPDL
FELAKSEPRDAGTDQRSSGIIRLHTIKQIIDRDKHAVLDITPNAVDRLNYAQWYPIVVFL
NPDTKQGVKNMRTRLCSESRKSARKLYERAIKLRKNNHHLFTTTINMNNMNDGWYGALKE
TTQQQQNQLVWVSEGKADGTTEDDLDIHDDRLSYLSAPGSEYSMYSTDSRHTSDYEDTDT
EGGAYTDQELDETLNDEVGLPTEPAITRSSEPVREDPPVIQDTPGYPGYQQPVQPDPASR
IDPAGFKMAAPQQRAEAAPPPAVEQPVQLEPMHLEEPPAAAAAPQADSLSSLSPAPELIQ
SPHEPHPSGPPGPEPKMYKKDLYNMEDPVRIHHGLKQSLSYCHQPFQDKQPYREYHHPPY
GYDGYSEPKPHNTDSHPHYDNRVPHYNEQWPPYDQQTSSSQPAGYQPGHQQPMGYNARSP
YDDGPGRDYSPTRPRYDEAPPAGYDGRRRHSKPGPVRYDELPPPSAYDARSPYEAEPHGF
PINSPRSPEPPKQYYGDSGLRPTYIPGPANRGFKQGMHEPMMNSEPTIPLPKPETLPSPG
EPATTPGSKPLPPPPREDLDEDPAMKPQSVLNRVKMFENKRSVSMDRAKEGGESALRPAD
VPKPVIAPGPVLKANSLSNLEQEKSSYRAPEPQKPHTNHYDPDEDEEYYRKQLSYFDRRS
FDSKAMSQPSPGINRFHDLPKPAQMSYPYNRVESVEKVSPVEKRYEPLLQISPSSQYGPP
GSATSPNTLLKLSPNDANSIPELLSSTNPKPELPALRPAGRDDPPPGGYLPPRGLPDKSP
VNGVETAPPKTLGAPTSYNRYVPKPYSSSARPFERKFESPKFNHNLLPNDTPVKTELFGK
PSGGKPALSPQPPDHDSGLDTFTRTVDNRPKYQHNNINAIPKAVPVSPSTLDDDDEDEGH
TVVATARGIFNCNGGVLSSIETGVSIIIPQGAIPENVEQEIYFKVCRDNSILPPLDKEKG
ETLLSPLVMCGPHGLKFLKPVELRLPHCASMTPDGWSFALKSSDSSSGDPKTWQNKSLPG
DPNYLVGANCVSVLIDHF
NT seq
5817 nt
NT seq
+upstream
nt +downstream
nt
atgcacctcctctccttcaggaactgcattgacagagtcgtggaagaggttctggttggt
cccctcaactcgaagatgtttggcagcgtctctaagaagtggtttgtgaagaagcagaag
aggcaccagcacaggtctggcaggaggccgtgcaccaggaagaagaagagatgggcgtcc
aagatcctcaaacggcaccgccaaaagatcctgagcgagctggacgtcagcgcggtgctt
ccctacctggtatatgataaggttttcacactgggggagtataaggagatactgggacac
gagtccagcaagaaacggacggaggtattcttggaccatctgtcctgtaaggggccggct
gcattctgttcattctgctctgttttggaggaagagtgtcctcacctgctgacttccttt
ctgctggatgaaaaagatggtgccccgcgacaggccaggaacgggggactcccagtgccc
cctaacagtccaggagagcaacctctgtgctcccctcccacgtacaccgaccccgtgttt
gactccaggatacacccgagcccgactgctggctccatcacaggctcgtcagtgagcacc
attcagggcaaaccatcactccgccgcatcaagggccgcatccacaggagcaagagcctg
gacagccttgatctgctcgactcccatagtgcagcgatggaggagactgtcatttgggaa
cagcacacagtaacactgcacagggcaccagggtttggcttcgggatagccatatcagga
ggtcgagataaccctcattttcagagtggcgagacctccattgtaatttcggatgtgctg
aaaggtggccctgcagatggcctgctgcaggaaaatgacagagtcgttatggtcaatgct
gtctccatggacaatgtggagcacgcatacgccgtccagcagcttcgtaaaagtgggaaa
attgccaaaattacaatcagacggaagagaaaggtgcatgtccccatgggccgcctcggg
gagagagaaactatgtcggagcatgacgaggaggaggacagctatgacgaagagatctac
gagacgcggagcggacgcagcgcggcctacagcggtgtgggcggggccatgagccggcgc
agcggccggagcagcgggcggcgggacaggcgacgtgaacgcagcggctcgcgagagagg
agcctctccccgcgcttagaccgccactcgcacaacctgcccccgcgtcccgcaaagatc
acacttgtcaaatctcgcaaaaatgaagcagaatatggcctccgcctggccagccacatc
tttgtcaaggacatttcccccgagagcctggcagccagagacggcaacatccaggaagga
gatgttgttctgaagatcaatggcacagtgacagaaaacctctccttgatagatgccaag
aagctgatagaaaggtcaaagggcaagctaaaaatggttgtgcagagggacgacagggcg
accctgctgaacatccctgacctcgatgacagcatcgcttcagccaacgcctctgaccga
gacgacatttcagatatccattctctggcatccgaccattccaatcgatcgcatgacaga
catcgcagcagccgctcccgctctccagacagaagatctgaaccctcagaccactccaga
cactcgcccccacagatcagcaatggcagcagtcacagaagtcgtgatgacgaacggtcc
tcgaagccgtcttctactccagtgaagctaccagaggacgttcctctgcccaaaccgaag
gaggcggctgttgctcgagaggagaaacagctcccaccactcccagagcccaagccggtg
tatgctcagcctggacagccagatgtagacctgccagtcagtccctctgatgcccctatg
ccgagtgctgcccatgacgaaagcatcctacggccaagcatgaagctggtgaagttcagg
aagggggagagcgtggggctgcggctggccggggggaacgacgtgggcatctttgtagcc
ggagtgctcgaggacagcccggcttctaaggagggcctggatgagggcgaccaaatactc
agggtaaataatgtagatttttcaaacataatccgagaggaggcggtgctgttcctactg
gacctccctaagggtgaagaggtcaccattctggcccagaagaagaaagatgtgtatcgg
cggattgtggagtctgatgtcggggactccttctacatccggacacactttgagtacgag
aaggaatctccgtacgggttgagctttaacaagggggaggtgttccgggtggtggacacc
ctctacaacgggaagctgggctcctggctggcgatccgcatcggcaagaatcaccaagag
gtggagagaggcatcatccccaacaaaaacagagcggagcagctgtccagcgtgcaatac
actctccccaaaacagcgggcggcgacagggcggacttctggaggtttcgtggtcttcgg
agttcaaagaggaacctgaggaagagcagagaggatctctcctcccagccagtccagaca
aagttcccggcttatgaaagagttgtactgagagaggccggtttcctgagacccgtggtg
atatttgggccgatagctgatgttgctcgagaaaagcttgccagagaagagccagatctt
tttgagcttgcgaagagtgaaccgagagatgcaggaacagaccagcggagttcaggaatc
attcgtcttcacaccatcaagcagatcattgacagagacaaacacgccgtcctggacatc
acccccaacgctgtggaccgactgaactacgctcagtggtacccgattgtggtcttccta
aatcctgatacgaagcagggggtgaagaacatgaggaccaggctgtgttcagagtccagg
aagagcgccaggaagctctatgagagagccatcaaactgaggaagaataatcaccacctg
ttcaccaccaccatcaacatgaacaatatgaatgacggctggtacggagctctgaaagaa
acgacccagcagcagcagaaccagttggtgtgggtgtcggagggcaaggcggatggcacg
acggaggatgacttggacatccacgacgaccgtctgtcctacctgtccgcgccaggaagt
gaatactccatgtacagcacggacagccgccacacgtctgactacgaggacacggacacg
gagggcggagcctacacggaccaggagctggacgagacgctgaacgacgaagtgggcctg
cccacggagcccgccatcacccgctcttccgagcccgtgcgagaagacccgccagtaatt
caggacacccctggttaccctggataccagcaaccggtgcagcccgacccagctagtcgc
atagaccctgccgggttcaagatggctgcgccgcaacagcgagctgaggctgctccgccc
cctgctgttgagcagcctgtacagcttgagcctatgcacctagaggagccgcctgctgca
gccgcagctcctcaggccgactcacttagcagcctcagccctgcccctgagcttattcag
tcaccacatgaaccccacccatctggaccgcctggtccagaaccaaagatgtacaagaaa
gatctgtacaatatggaggaccctgtgcgtatccaccatggcctgaagcagtctttgagc
tactgtcaccagccgttccaggacaaacagccataccgcgaataccaccacccgccttac
ggatacgacggctactcagaaccaaagcctcacaacaccgactctcacccgcactacgac
aaccgtgtgcctcattacaacgaacagtggcccccctacgaccagcagacctcgtcctcc
cagcccgcagggtaccagccgggccaccagcaacccatgggctacaacgcccggtcgccc
tacgacgacggaccggggcgggactacagccccactcggccgcgttacgacgaggcccct
cccgcgggctacgacggccgccgacggcacagtaaacctgggcccgttcgttacgatgag
ctcccgcccccgtctgcctacgatgcccgctccccttacgaggcagaacctcacggcttc
cccattaattcgcctcgatcgccggagcccccaaagcagtattacggtgactctggtctg
aggcccacctacattcctgggccggcaaaccgtggctttaagcaagggatgcacgagccg
atgatgaactctgagcccacaattccccttcctaaaccagagaccctgccctctcccggt
gagccagcgaccactccgggatccaaacccctcccccctccgccacgggaagacctggac
gaggacccggccatgaagccacagtcggtgctcaacagagtgaagatgtttgagaataaa
cggtctgtttctatggacagggctaaagaaggaggggaatcggctctcaggccggcagat
gttcctaaacctgtgattgcacctggccccgtcctcaaagccaactccctgagcaacctg
gagcaggagaagtccagctacagggcccctgagccacagaagcctcatacgaaccactat
gacccagatgaggacgaggagtactacaggaagcagttgtcctacttcgatcgccgcagc
ttcgacagcaaggccatgagccaaccgagtcctggcatcaaccgcttccacgatctgccc
aaaccagctcagatgtcctacccttacaacagagtggagtctgtagagaaggtgagtcca
gtggagaaacgatatgaacccttgctacaaatcagcccatcctctcagtacgggcccccg
gggtccgccacgtcgcccaacacactgctcaagctcagccccaacgacgccaactccata
cccgagctactgagttcaaccaatcctaaacccgagctgccagctctcaggccggccggc
cgagatgaccccccccctggcggctacctgccccccaggggcctccccgacaaatccccg
gtcaatggcgtcgaaacggcgcccccgaagacgctgggcgctccgacgagctacaaccgc
tacgtccccaagccgtacagcagctccgcccggcccttcgagcgcaagtttgagagcccc
aagttcaaccacaacctgctgcccaacgacacgccggtgaagacggagctcttcgggaag
cccagcggggggaagccggcgctgtcgccgcagcccccggaccacgacagcggtctggac
accttcacgcgcaccgtggacaacaggcccaaataccagcacaataacatcaacgccatt
cccaaggccgtccctgtcagccccagcacgctggacgacgacgacgaggacgaaggacac
acggtggtggccacggcccgggggattttcaactgtaacggaggggtcctgagctccatc
gagacgggcgtcagcatcatcatcccccagggcgccatccccgagaacgtggagcaggag
atttacttcaaggtgtgccgggacaacagcatcctgccccccctcgacaaggagaaagga
gaaacgctgctaagtccgctggtgatgtgcggcccgcatggactcaagttcctgaagcca
gtggagctgcgcttacctcactgtgcgtctatgacccccgatggttggtcttttgctcta
aaatcctccgactcctcgtcgggtgatcctaaaacctggcagaacaaatctctccccgga
gacccaaactacctggtgggggcaaactgtgtgtccgtgctcattgaccacttctga
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integrated database retrieval system
