Pseudoliparis swirei (Mariana hadal snailfish): 130194758
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Entry
130194758 CDS
T09868
Symbol
sntb2
Name
(RefSeq) beta-2-syntrophin
KO
K24064
beta-syntrophin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130194758 (sntb2)
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Motif
Pfam:
PH_17
PDZ
PH
PDZ_6
PDZ_2
Tricorn_PDZ
Motif
Other DBs
NCBI-GeneID:
130194758
NCBI-ProteinID:
XP_056271895
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All DBs
Position
6:28560081..28591128
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AA seq
612 aa
AA seq
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MAVWTRADKNGQLDLLLRDRWIRVAAELTRETLTLTAEAAAPGGNHWDYSNSSAGLRNGL
SNGNDPGASPGSRGPSSGPDQLQNQNQGGRGRSGSPGRGGVSRGQHEGNYGPNSPGKYPN
NGTNTDFGSPGSSYGSPGSSSGSRQGDAPVSLDGSSEAVRKVRVVKQESGGLGISIKGGR
ENRMPILISKIFPGLAADQSRALRVGDAILSVNGNDLREATHDLAVQALKKAGKEVTLEV
KYIREVSPLFKKPTLVADLPWDGVRPTSPSYSGSEDSGSPKHCGSSPSSKDRKVMSLKMC
FISRNLTMPDLENRLLELHSPDGQHTVVLRCKDGPSASGWFTAVHTNIAALLPHTLAHVN
AYLGASPSAAAHPHLKHIGWLAEQVQLEGGRQQYKPVVMALTEKDILLFEAVPWSRESWS
TPLLTHPLLATRLVHSGGARGSPAQGSDLVFATRTGTGRGIEAHVFRVETHWDLSSWTRA
LVQGAHAAAELIKEVSIGCTLSRQDVRLTLHYEKGFTLLREPAEPAGGAVLFRYPYEKLK
MSADDGMRHLYLDFGGPEGEMVLDLHSGPKPVVFVLHSFLSAKLTRMGLLTVTGGAVVVP
EAPPPPPGVRTA
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctggaccagggcggacaagaacgggcaactggaccttctgctccgggaccgc
tggatccgagtggccgccgaactcacccgggaaacgttgactctcacggccgaagcggcg
gcgccggggggaaaccactgggactacagcaactcgtcggcgggcctgaggaatggcttg
tcgaacggaaacgacccgggagcgagtcccgggagccgcggtccgagctccggtccggac
cagctccagaaccagaaccaggggggcaggggacgcagcggcagcccggggcgcgggggt
gtcagtcggggtcagcacgaagggaactacggtcccaacagccccgggaagtacccgaat
aacggcacgaacactgacttcggaagccccggctccagctacgggagtcccgggtccagc
tccgggtccagacaaggcgacgcccccgtcagcctggacggctcctcggaggcggtgcgg
aaggtccgggtcgtgaagcaggagtccggcgggctggggatcagcatcaagggcgggcgc
gagaaccggatgcccatcctcatctccaagatcttcccggggctcgcggccgaccagagc
cgggctctgcgcgtgggcgacgccatcctctcggtgaacgggaacgacctccgggaggcg
acgcacgacctggcggtgcaggcgctcaagaaggcggggaaagaagtcacgctggaggtg
aagtacatccgcgaggtctctccgctcttcaagaagccgaccctggtggccgacctgccg
tgggacggcgtgcgcccgacgtcgcccagctacagcggtagcgaggactccggctcgccc
aaacactgtggctcctccccttcctccaaggacaggaaggtcatgagcctgaagatgtgc
ttcatcagcaggaacctcaccatgcccgacctggagaacaggctgttggagctccactcc
ccggacggccagcacacggtggtgctgcgctgtaaggacggcccctcggccagcggctgg
ttcaccgccgtgcacaccaacatcgccgccctgctgccgcacacgctggctcacgtcaat
gcctacctgggggcgtcgccctcggccgccgcgcacccccacctcaaacacatcggctgg
ctggccgaacaggtgcagctggaaggaggccggcagcagtacaagccggtcgtcatggcg
ctgacggagaaggacatcctgctctttgaggcggtgccgtggagcagagagtcctggtcc
acgcctctgctcacacacccgctgctcgccaccagactggtccattcgggcggcgcccgc
ggttctcccgcccagggctcggacctggtgttcgccacccggacgggcacggggcggggc
atcgaggcccacgtgttcagggtggagacccactgggacctgtcgtcatggacacgagcc
ctcgttcagggggcgcatgctgccgccgagctcatcaaggaggtctccatcggctgcacg
ttgagccggcaggacgtccggctcacgctgcactatgagaagggcttcacgttgctgagg
gagccggcggagccagcagggggcgccgtgctgttcaggtacccctacgagaagctcaag
atgtccgccgacgacgggatgcgccacctgtacctggacttcgggggtccggagggggag
atggtgctggacctccactcgggcccgaagccggtggtgttcgtgctccactccttcctg
tcggccaagctcacccggatgggccttctgacggtgaccggtggagcggtggtggttcca
gaggctcctcctcctcctccaggcgtcaggacagcgtga
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