Pseudoliparis swirei (Mariana hadal snailfish): 130194829
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Entry
130194829 CDS
T09868
Name
(RefSeq) paired box protein Pax-6-like
KO
K08031
paired box protein 6
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130194829
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
130194829
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
HTH_23
Homeobox_KN
HTH_Tnp_IS1
HTH_SB
DUF6115
Motif
Other DBs
NCBI-GeneID:
130194829
NCBI-ProteinID:
XP_056271993
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All DBs
Position
6:complement(27681353..27709705)
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AA seq
433 aa
AA seq
DB search
MPQKDFRSQTSWETGVASMMQNSHSGINQLGGVFVNGRPLPDSTRQKIVELAHSGARPCD
ISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATSEVVGKIAQYKRECPSIFAWE
IRDRLLAEGVCTNDNIPSVSSINRVLRNLVSDKQQMGTVGAEGMFDKLKMLNGQTTWGGR
SGWYAGTTLPTTECPQAEARENTISVGSTGEDSEETQMRLQLKRKLQRNRTSFTQDQIEA
LEKEFERTHYPDVFARERLANKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQVSNSSNH
IPISSSFNTSVYQPIPQPTTPVSFSSGSMLGRSDPVLSNSYSLPAMPSFSMAASLPMQAS
SQASYSCMLPTSPAVNGRSYETYTPPHMQPHINSQSMTSSATSSTGLISPGVSVPVQVPG
NEADMSQYWPRLQ
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgccacagaaagatttccggagccaaacaagctgggagactggtgtggcctccatgatg
caaaacagtcacagtggaataaaccagctgggaggcgtgtttgtgaacgggagaccttta
cctgattctaccaggcagaagatagtggagctggcacacagtggagctcgaccttgtgac
atatccagaatactgcaggtgtcgaacggctgtgtcagtaagatcctgggccggtattac
gagacgggttcgatccgtccccgggccataggagggagtaaacccagggtggccacgtcg
gaggtggtggggaagatcgctcagtacaagagggagtgtccgtccattttcgcctgggag
atcagagaccgactgctggcagagggagtctgcaccaacgacaacatccccagtgtctca
tcaataaatcgagtgctccggaacctcgtcagcgataagcagcaaatgggcaccgtggga
gccgaggggatgtttgacaagctcaagatgctcaatggacaaaccacctggggggggcgc
tcagggtggtacgctgggacgacactccccaccactgagtgtccgcaggccgaggccagg
gagaacaccatctcagtcggttccaccggtgaagactcagaggagactcagatgaggctt
cagctgaagaggaagctacagaggaacaggacgtcattcactcaggaccagatagaagcg
ctggagaaagaatttgaaaggactcactatccggacgtgtttgccagagaacgccttgcc
aacaaaatagacctcccagaggcaagaatacaggtttggttttccaaccgacgagcaaag
tggagaagagaggagaagctcagaaaccaacggcgtcaagtgtccaactcctccaaccac
attcccatcagcagcagcttcaacaccagtgtttaccagccaataccgcaacccaccaca
ccagtgtccttctcatcaggatccatgttgggaaggtccgatccagttctgtccaacagc
tacagcctaccagccatgccaagcttcagtatggctgccagcctgcctatgcaagcatcc
agccaggcctcttattcctgcatgctgcccaccagccccgctgtaaatggaagaagttat
gaaacatacactcctccacacatgcagccacacatcaacagccaatcgatgacgtcctct
gcaacgtcgtcaacaggtctgatttcccctggtgtctcagttccggtccaagttccagga
aatgaagcggacatgtcacagtactggccacgcctgcagtga
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