Pseudoliparis swirei (Mariana hadal snailfish): 130194903
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Entry
130194903 CDS
T09868
Name
(RefSeq) neuronal cell adhesion molecule-like isoform X1
KO
K06756
neuronal cell adhesion molecule
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130194903
BRITE hierarchy
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
Bravo_FIGEY
V-set
Pur_ac_phosph_N
Ig_5
ATPgrasp_YheCD
Motif
Other DBs
NCBI-GeneID:
130194903
NCBI-ProteinID:
XP_056272086
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All DBs
Position
6:complement(9031884..9111952)
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AA seq
1318 aa
AA seq
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MMERRRMDAALLVLFLVRLATALEVPLDLPQPPTITRQSPKDYIIDPRENIIIQCEAKGK
PPPSFSWTRNGTHFDIDEDPNVTLKPHSGTLEVDISRVKAQQYESVYQCTARNKHGTAVS
NNIVVQQSRSPLWSKENVKALVVQEGVSLVLPCRPPAGLPPPIIFWMDNNFQRLPQSRRV
SQSLNGDLYFSNVLREDSRNDYICYARFPYTQTIQQKQPITVKVLNLDAINDTMAAFYND
TDLFSEEPADERKPTFLIPSGPTSSKMVLRGQVLELECIAEGLHTPDVSWTKVSGDLPAK
RTSFLQYQKTLRIVDASESDAGDYRCTARNQLGSVHHTIHVTVKAAPYWISGAPKNLILA
PGESGVLTCRASGTPKPSVSWAMNGIPIENSPKDLSRKVEDDTIIFTDVQTGASAVYQCN
VSNDYGYLLSNAFVNVLSETPRVLTAANKVYQVIKNHRALLDCDSFASPIPKITWFKDSR
SSTLDGDPYILHDNGTLEIHVAQDHNSGRYTCVARNSLGINENHIYLEVKDPTRILKQPE
HKVVQVGRSVVFECKVKHDPSLIPTMTWLKDDGELPDDERLIVDSDSLTITDVTENDAGV
YTCVMNTTLDHDSASAELTVVERPDSPTDLELTDHKKRSVQLTWIPGDEHNSPIQKFLIQ
YQNSLHHRGHWHNLTEVAGNRTTAHLKLSPYVHYTFRVLALNAVEFSRPSIPSRGLKTEP
AAPDENPTGVKGSGTEHDNLVISWKPLSGLQSNGPGLHYRVMWRQKVVDSEWTRVTVANN
SKFVVSGTPTFVPYELKVQAVNDYGAGPDPAIAHGHSGEDLPVAAPDNVKVMWINSTLAE
VHWDPVPSKFIRGHLEGYKVYYWRKHSLHKHNPDLVENQVLILSGKHTHRKLPGLHPFSV
YSLNVRVYNGKGKGPPSAELQFNTPEGVPGAPSHLLVTNPSLDSLTLEWSPPHDRNGRIT
GYTLKYQPVVNNSNELGPVEELALPANESSVTLLNLKYSTRYKFYLNAKTVRGAGLVVSQ
EAVTVIDEALISRHGVDVGAGNTQTPHPIAPSPPQGPPDKGIDTAAILVHDCTSQPVSPF
GNVSSSSGEDGMLISWEYWGPEQNVYVEYKENSEGEEEWQKKLVNGSQNVVLKGLKGGLS
YSVRLVAKGHHDQLPHLSEELLVSVPAVASRQVDIATQGWFIGLMCAIALLILILLIICF
IQRNKGGKYPVKEKEDAHTDPEFQPMKDEDCTFGEYSDNEDHKPLKGSRTPSNGTVKRGN
SDDSLVDYGEGGDGQFNEDGSFIGQYSGKSASRETAEGHESSEAPSPINAMNSLHSFV
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atgatggagaggaggaggatggacgcagctctgctggtgctgttcctggtgcgcctcgcc
acagcgctggaggtcccattagacctgccgcagccaccgaccataactcgccaatccccc
aaggattacatcatcgacccacgagagaacattataatccagtgcgaggcgaagggcaag
cctccccccagtttctcctggaccagaaatgggacccactttgacatcgacgaagacccc
aacgtgaccctgaagccccactctgggaccctggaggtggacatcagcagagtgaaggcc
cagcagtacgagtctgtgtaccagtgcacggcgaggaacaaacatggaaccgccgtttcc
aacaacatcgtcgtacagcagtcccggtcccccttgtggtcgaaggagaacgtcaaggca
ttggtcgttcaggagggcgtgtccttggtgctgccgtgtcgaccccctgctggcctgcct
cctcccatcatattctggatggacaataacttccagaggctgccgcagagcaggagggtg
tcccagtccctgaacggagacctttacttctccaacgtgctccgagaggattccaggaac
gactacatctgctacgcccgcttcccgtacacacaaaccatccagcagaaacaacccatt
accgtcaaggtcctgaacctggatgcaatcaatgacacaatggcagctttttacaatgac
actgatttatttagtgaagaaccagcagatgagaggaagccgaccttcctcatcccatct
ggccccaccagctccaagatggtgttgagaggacaggtgctggagttggagtgcattgcc
gaaggactgcacaccccggatgtatcttggaccaaagtgagcggcgacctcccagccaag
cgaacatctttcctgcagtaccagaagactttgcgcatcgtggacgcgtcggaatcagac
gcgggagattaccgctgcaccgcccggaaccagctgggctcggtgcaccacaccatccac
gtcacggtcaaagctgctccatattggatcagcggcgcgcccaagaacctcatcttggct
ccgggagagagcggtgtgctgacctgcagggccagcggcacgcccaagccctccgtctcc
tgggccatgaacggcatccccatcgagaattcccccaaggacctcagcagaaaggtggag
gacgacaccatcatcttcactgatgtgcagaccggagccagcgccgtctaccagtgtaac
gtctccaacgactacgggtacctgctgtccaacgcgttcgtcaatgtgctctcggagacc
cccagagtgctgactgcagccaacaaagtttaccaggtcatcaaaaatcaccgggccttg
ctcgactgcgattccttcgcgtcacccatccctaaaattacttggttcaaagacagccgg
tccagtaccctcgacggagacccttacatcctgcacgacaatgggactctggagatccac
gtagctcaagatcacaacagtggcagatacacatgcgtggcccgaaacagcctcggtatc
aacgagaaccacatctatctggaggtcaaagacccaactcgcatcctgaagcagccggag
cacaaagtggtccaggtgggcaggtctgtggtgtttgagtgcaaagtgaaacacgacccc
tcgctcatccccaccatgacctggctcaaagacgacggagagctgcccgatgacgagaga
ttaatcgtcgactctgacagcctcaccatcaccgatgtgacagagaacgatgcgggcgtg
tacacctgcgtcatgaacaccactctggaccacgactcagccagcgctgagctcactgtt
gtcgagcggcccgactccccgactgacctggagctgacagaccacaagaagagaagtgtt
cagctcacttggatccccggggatgaacacaacagccctattcagaaatttctgatccag
tatcaaaactcgctgcaccaccgaggtcactggcataatctcaccgaggtcgccggcaac
aggacgacagcgcacctcaagctgtcgccctacgtccactacaccttcagagtgttggcc
ctcaacgccgtggagttcagccggcccagcatcccctccagagggcttaagacagaaccg
gcagctccggacgagaacccaacaggtgtcaagggatctggaacagaacatgataatctt
gtgatctcatggaagccgctgtcaggcctccagtcgaacggcccagggcttcactacaga
gtgatgtggaggcagaaggtggtggacagcgaatggaccagagtgaccgtggcgaacaac
tccaagttcgttgtgtctggaacgcccacatttgttccttatgagctcaaagtgcaggca
gtgaacgactatggagcgggacctgaccccgctatcgcccacggccactcgggggaggac
ttgccagtagcagctccagataatgtgaaggtcatgtggataaatagcactctggcagag
gtacactgggatcctgtgccctctaaattcatacgaggacatctcgaaggatataaggtg
tactactggagaaagcacagcctccacaagcacaaccccgatcttgtggagaaccaggtc
ctgatcctcagtgggaagcacacccacagaaagctgcccggcctccaccccttcagtgtc
tactccttaaatgtcagggtgtataacggcaagggaaagggcccccccagcgccgaactg
cagttcaacacgccggaaggagtgccgggtgctccttcacacctgctcgtcaccaacccc
agcctggactctctgacccttgaatggagtcctcctcacgaccgtaacggacgcatcact
ggctacaccctcaaatatcagccagtcgtcaataactccaatgagctgggcccagtggag
gagctggcgctgcccgccaatgagtcctcagtcactttgctgaacctcaagtacagcacg
cgctacaagttttatttgaatgcaaaaacagtcaggggagcaggcctggtcgtttctcag
gaagccgtcaccgtcatcgatgaagctctaatatcacggcatggcgtggatgtgggcgca
ggaaacacgcaaacccctcatcccattgcaccgtctcctccacaaggtccgcccgacaag
ggtatagacactgctgcgatcttagtccacgactgtacatcgcagcccgtgagtcctttc
gggaacgttagctcctcgtctggagaagacgggatgctgatcagttgggagtactggggc
cccgagcaaaacgtttatgtagaatacaaagagaacagtgaaggcgaagaggagtggcag
aaaaagcttgtgaacggcagtcagaatgttgtgctgaagggcttaaaggggggcctctcc
tatagcgtgcgcttggtggccaaaggtcaccacgaccagctgcctcacctctctgaggag
ctgttggtctcggtcccagctgtggcgagcagacaggtggacatcgccactcagggatgg
ttcatcggcctcatgtgtgccatcgctctgctcatcctgatcctcctcatcatctgcttc
atccagaggaataagggaggaaagtacccagtcaaagagaaggaggacgcacacacagac
ccagagttccagccaatgaaagatgaagactgtacttttggggaatacagtgacaatgag
gaccataaaccgttaaaagggagccgcacgccgtctaacgggacagttaagagaggcaac
agtgacgacagtttagttgactacggggaaggaggagacggccagttcaacgaggatggc
tcgtttatcggccagtatagtggaaagagcgccagcagggagactgccgagggccacgag
agctcggaggccccgtcccctattaacgccatgaactccctgcactcgttcgtgtag
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