Pseudoliparis swirei (Mariana hadal snailfish): 130194931
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Entry
130194931 CDS
T09868
Symbol
cnot2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130194931 (cnot2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130194931 (cnot2)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130194931 (cnot2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
130194931 (cnot2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
130194931
NCBI-ProteinID:
XP_056272129
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All DBs
Position
6:19326614..19333946
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AA seq
530 aa
AA seq
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MFGARKKFVEFVEAVDNDFTDDSMYYSQPSIFPHRSDKDSSNVFLQMLSSPSPSSSGQLS
QLGASLYGPQSALGFSVRGMGNSTPQLNRNLTQGSQLPSHITPTTGVPTMSLHTPPSPSR
GTLPMNTRNMLNHSQVGQSIGMSGRTNSMGSSGLGSPNRSSPSIICMPKQQPARQPFTIN
SMSGFGMNRNQAFGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRSRREGTGNPTPVL
NPLAGRAPYVGMVTKPSTEQTQDFSIHNEDFPALPGPNYKDPTLNTDESKTNLNSAIKSL
SNADGPKFPGDKTTSAQNNNQKKGIQVLPDGRVTNIPSGMVTDQFGMIGLLTFIRAAETD
PGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASSPCRPQDIDFHVPSEYLTNIHIRDK
LAAIKLARYGEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTLK
TNTYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHVPTTFNYNPAQQAF
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgctagaaagaaatttgtagagttcgtcgaggcagtcgataacgacttcacc
gatgacagcatgtactacagccagccgtcgatattcccacatcggtcggacaaagattcc
tcaaatgttttccttcagatgctgtcctctccctcgccgtcgtcgtcggggcagctgtcg
cagctcggtgcaagtttgtacggtccacagagtgcacttggcttctcggtaaggggcatg
gggaacagtacgcctcagttaaatcgaaatctaacgcaaggctcgcagctaccaagtcat
atcacgcccacgacgggggtccccaccatgtccctacatacccctccgtcaccaagcagg
gggacattgccgatgaacacgaggaacatgttgaaccactctcaggtcggtcaaagcatc
gggatgagcggcaggaccaacagtatgggaagctcggggcttggcagtcccaaccgcagc
tcgcccagcatcatctgtatgcccaagcagcagccagcacgccagcccttcaccataaac
agcatgtcggggtttggtatgaatcggaatcaggcgtttgggatgaacaactcgttatca
agcaacatcttcaatggcacagatgggagtgaaaatgtaacgggactggatctgtcagac
ttccctgcgttagcagacaggagtcggagggaagggactggaaacccaacaccggtgctc
aacccactggctggacgggctccttatgttggcatggtgacgaagccatcgactgaacag
acgcaggacttctccatccataacgaggacttccctgcactgcctgggccaaactacaag
gaccccacgttgaacaccgacgaaagcaaaacaaacttgaactccgcaatcaagagctta
tccaacgcagatgggccgaagtttcccggagacaagacgacctcagcacagaacaacaac
cagaagaaagggatccaggtgttgcccgatggccgggtgacgaacattccctcagggatg
gtgacggaccaattcggcatgatcggcctgctgacgtttatccgggcggcagagaccgat
ccggggatggtccatctggcgctaggaagtgacctcacgacattgggactcaacttaaac
tcaccagaaaacttgtaccccaagttcgcctctccctgggcctcgtcgccatgtcgacct
caagacatcgacttccacgttccgtctgaatacttaaccaatatccacataagggacaag
ctggcggcaattaaactggcacgatatggagaagacctgttgttctacctgtactacatg
aacggtggagacctgctccagcttctggcagcagtagagctcttcaatcgggactggagg
taccacaaagaggagcgggtctggataacgagggcgcctggcatggagccaacactgaag
accaacacctacgagaggggaacctactacttttttgattgtctcaactggaggaaagta
gccaaggaattccatctggagtacgataagcttgaagagaggcctcacgtgccaacaaca
ttcaactacaacccagcccagcaggccttctaa
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