Pseudoliparis swirei (Mariana hadal snailfish): 130194967
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Entry
130194967 CDS
T09868
Name
(RefSeq) LHFPL tetraspan subfamily member 3 protein-like
KO
K23893
LHFPL tetraspan subfamily member protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
130194967
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswi02000
]
130194967
03037 Cilium and associated proteins [BR:
pswi03037
]
130194967
Transporters [BR:
pswi02000
]
Other transporters
Pores ion channels [TC:
1
]
130194967
Cilium and associated proteins [BR:
pswi03037
]
Other cilia and associated proteins
Stereociliary proteins
130194967
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
L_HMGIC_fpl
Pilin_N
Motif
Other DBs
NCBI-GeneID:
130194967
NCBI-ProteinID:
XP_056272169
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All DBs
Position
6:10212777..10213178
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AA seq
133 aa
AA seq
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MLPSAEAAKLYQTNYVRNSSVIGLLWTIFTILFGIVNVIIFSQPYWIGDGVDTPQAGYFG
LFQFCIGDGIARELDCEGTFTEFADIPSTAFKAASFLIGMSMMLIVSCIGCFSLFFLLST
STVYKICGWMQAA
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgctaccgtctgcagaagctgcgaaattgtaccagaccaattacgtccgcaactccagc
gtcatcggacttttatggaccatcttcacgatcctgttcggtattgtgaacgtgatcatc
ttctcccagccctactggatcggggatggcgtggatacgccgcaggccggctacttcggc
cttttccaattttgcatcggagacggcatcgccagagagctggactgcgaggggaccttc
actgagttcgccgatatcccctccaccgcgttcaaggccgcctccttcctcatcggaatg
tccatgatgctgattgtctcctgcatcggctgcttcagcctcttcttcctcctcagcacc
tccaccgtgtacaagatctgcggctggatgcaagcggcataa
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