Pseudoliparis swirei (Mariana hadal snailfish): 130194978
Help
Entry
130194978 CDS
T09868
Name
(RefSeq) mucin-2-like
KO
K22023
mucin-6/19
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130194978
Membrane trafficking [BR:
pswi04131
]
Others
Mucins
Secretory mucins
130194978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWD
C8
TIL
VWF
VWC
Motif
Other DBs
NCBI-GeneID:
130194978
NCBI-ProteinID:
XP_056272180
LinkDB
All DBs
Position
6:11162145..11180971
Genome browser
AA seq
2552 aa
AA seq
DB search
MRETCVWLCFLALSVASVIDVQARLVHNHVSSICSTWGREHFKTFDGDVYQFPGMCEYNL
VSDCHESYQEFSVHMKRKDTDGNPAVSHVVVTINDLLFYLTKNMITVNDLPVKTPYYNGG
VQLEKNAVYIKLQSKVGITVMWNGDDAVMVELDADYVNRTCGLCGDFNGVSVHNEFIHNG
RKISPVEFGNRQKVHRPNDECEDPSEEEEEEESLEAVLDSCKEFQTTCNQMLRSEPWSSC
TKRISPEPYIQACVQDMCGCANSTDYFCVCSTLSEFSRQCSHAGGQPPNWRTPQFCAKQC
PYNMIYEESGSPCMDTCALPDTSSLCEDHKMDGCFCPPGTVFDDISMRGCITQSQCQCKH
NKIYNSGEVYRQDREECTCVEGRWTCQSLQTPATCAIEEGSHVTTFDGKAFTFHGDCYYT
LAKDQASPKFTILVQLVPCVNQEFDTCLKSLKILLNNDRNNALMFTSDGTVKLNMQPISL
PYHSGDINIFHASSFHILLQTSFGLQIQIQHVPVMQIYVSLEQSYRAKTRGLCGNYNMVL
SDDMKTPQGIVEGTAVTFSNSWKANLMCRDRDERLEDPCSLSVENELYAKHWCALLLSPD
SNFTQCHSVLDPEKYYKRCTYASCNCEKNEDCLCAVFSSYARACASKGVFLTDWRENVCD
KHTRSCPASQIFSYKHQRCQLTCRSLGTMQQSCTSDFLPVDGCSCSEGLYLNENNICVPM
AKCPCYHNEVYVKSGKSISIKEEHCDDCDFTECESGCRCPDGLLEDGKGSCVKENECPCQ
HNKEIYAHGSQIPDQCNICTCKSGSWECSKKKCPGTCIIYGSGHYNTFDQQTYGFQGHCA
YVAVKNKCGNKTVQDNFGIITENVPCGSTGTTCSKTVRIQLGRMEVKLSKGKYEEVNVGN
GAEIPYRIRKVGMYVVLESAIGLVVMWDGKTTVRIILEPQHSGEVCGLCGDFNGDGQNDF
TTQGQLVVSSSLEFANSWKVSSQCQDVGMNSDPCGVRPNRHTWAKTMCSIITGNTFKDCH
NKVAPLPFYENCVKDSCACDTGGDCECLCSAVAAYAQACNAASVCVAWRTPDICPVFCDY
YNNPDECKWHYNPCHKPCYKTCLNPEEMCSEPLPNLEVIFEDEACNHTTTTPEPSTTFPT
PTIGPTITTQEPTTTTPRPTTTTTEPTTTTQEPTTTTAPTTTTQEPTTTTPRPTTTTTTT
TKPPTTIQEPTTTTPTASTTTTQEPTTTTPRPTTTTTEPTTTTQEPTTTTTRSTTTTTEP
TTTIQEPTTTTASTTTTQEPTTTTPRPTTTTTEPTTTIQEPTTTTASTTTTQEPTTTTPR
PTTTTITTASTTTTQEPTTTTPRPTTTTTEPTTTIQEPTTTTPRPTTTTNEPTTTTQEPT
TTTTTTTTASTTTTQEPTTTTPRPTTTTTEPTTTIQEPTTTTQSTIPPTGPTTTTQETFS
PVTGPPLVTSVPASTAPVISPTTQHESTITTTKSTTTTPEPTTTTQEPTTTTKTASTTTT
QEPTTTTPIPTTTTTTEPTTTTQEPTTTTTQSTTPPTDLTTPCRAYYNDNNCIYYNNTGA
YHNNPKTYNNNCIYYDNTGVFHNNPKTYNNNNNNCIYYYNPGEPTTTTTKSTTTTTPEPT
PTTQEPTTTTITASTTTTQEPTTTTPRPTTTTTASTTTIQEPTTTTASTTTTQEPTTTTP
RPTTTTNAPTTTTQEPTTTTPRPTTTTTEPTTTIQEPTTTTTTASTTTTQEPTTTTPRHT
TTTTNEPTTTTQEPTTTTPRPTTTTTESTTTTIEPTTTTQSTIPPTGPTTTTQETFSPVT
GPPLQNETFIVCNCTMARCIENNTIEIIPYECPALENITCTNGKDPVLVDDEYHCCQYYA
CDCVCEGWGDPHYITFDGLYYSYQGNCTYILMEEILPKHHLNIYIENVYCDPTEDVSCPR
SIIISYQSEVVTLINHNLLGAAQLEARNNGIRLKLPYSHKGFKILDSGINLILEIPKLEV
VITFGITGFSVTLPYQSFGTNTQGHCGTCNNNQADDCKLPGGKLIENCAVMADYWPAKHI
HQPNCQIPSVLPTNIPGPPPTFTPCNPDSICHMLKSSLFAACHSFVSPENFYQACVFDSC
HVSNPAVECTSLQTYAAACAQAGVCLHWRNHTSLCANNCPSNKVYKPCGPAEQPTCEDNP
NESTMNYTTEGCFCPDGMKLFNKESIICVDKCGCLDPEGIPREFNERFEYKCQNCICEEY
IKTVTCKPKTCPTRPIAECTDPGFVLVNQTNPSDSCCSTYVCQCQSNSCPFYDMNCQVGY
MPVVHVPEGKCCAERTCEPKRVCVHKKSEYQPGSSVPGPQCQDCTCTTEMDPGSGLFMIR
CEIQKCQQNCDMGYEYLETDSNECCGKCVQTHCVLSLNDTKNLLKPRETWSPPKNKCQHY
TCIKIGDTFTTFNSNIICPPYQPSNCHPGTIQTTADGCCTTCVEREKACKLVSMKTSVRH
NSCQSEQEVDIPYCEGSCNTFTKYSDAAAALQQSCSCCRESRSSNRTVDLHCWNGDVVPF
SYTYVEDCGCGHTDCTRANAQLPRRRRSSTLV
NT seq
7659 nt
NT seq
+upstream
nt +downstream
nt
atgagggagacatgtgtgtggttgtgtttccttgctctctctgttgccagcgtcatcgat
gtccaagccagactggttcacaaccacgtcagcagcatctgcagcacatggggccgagag
cacttcaagacgtttgacggtgatgtgtaccagttccctggtatgtgtgagtacaacctg
gtgtccgattgccacgagtcctaccaggagttctccgtgcacatgaagaggaaggacaca
gacggaaaccctgcagtcagtcacgtggtggtcaccatcaacgaccttttgttctacctc
accaagaacatgatcactgtgaatgacctccctgttaaaacgccatattacaatggaggg
gtacagttggaaaagaatgcggtttacatcaagctccaatctaaagttggcatcactgtc
atgtggaacggtgacgatgcagtcatggtggaactggatgctgattatgtgaatcgtact
tgtggactttgtggagacttcaatggtgtttctgtccacaatgagttcattcataatggt
cgcaaaatcagccccgttgagtttggaaacagacagaaagtacatcgtccaaacgatgaa
tgcgaggacccctctgaggaggaggaggaggaggaatcactggaggctgtgctggattca
tgcaaggagtttcaaaccacctgtaaccagatgctgcgttcagagccctggagctcctgc
accaaacggattagccctgaaccttacatccaggcctgtgtgcaggacatgtgtggctgt
gccaacagtacagattacttttgtgtgtgcagcacgctgtctgagttctctcgacagtgt
tcccacgcaggagggcagccccccaactggaggacgcctcagttctgtgctaaacagtgc
ccatacaacatgatttatgaagagagcggttccccttgcatggatacatgcgcacttcca
gacacaagttcactgtgtgaggaccacaagatggacggctgcttctgtcctccaggaact
gtatttgatgatatttccatgagagggtgtattactcaatctcaatgtcagtgcaaacac
aacaaaatctataactctggggaggtctaccggcaggacagggaggaatgtacatgcgtt
gagggtagatggacttgtcagagccttcaaacacctgctacgtgtgcaattgaagagggt
tcacacgtaactacctttgacgggaaagccttcaccttccacggagactgttactacact
ctagccaaagatcaagcaagtccaaagttcaccatcctggttcagttggttccttgtgta
aatcaagaatttgacacttgtcttaagagccttaaaatcctgctgaacaatgacagaaac
aatgctttaatgttcacttccgatggcacagtgaagctgaacatgcagcccatcagttta
ccgtaccactcaggtgacatcaacatattccatgcttcatcctttcacatcttgctccag
accagttttggattgcagattcagatccagcatgtgcctgttatgcaaatctatgtcagc
ctggaacaaagctacagagcaaagacacggggtttatgtgggaactacaacatggtgctg
tctgatgacatgaagactcctcaggggatcgtggagggaacagcagtaaccttcagtaac
tcctggaaggctaacctcatgtgtcgagatagagacgaaagacttgaggacccctgttcc
ctcagtgtggaaaacgagttgtatgctaaacactggtgtgccttgctactgagtccagac
agcaactttacgcagtgccattcagtgttggatcctgagaaatactacaagcgatgtact
tacgcgagctgtaactgtgagaagaatgaggactgcttgtgtgccgtcttctcgtcctac
gctcgggcttgtgcatcgaagggagtgttcttgacagactggagagagaatgtgtgcgat
aaacacacgaggagctgcccagcatctcagatcttctcttacaagcatcagagatgccag
ttgacttgcagatctctgggcacaatgcagcaaagttgcacttctgacttcttgcctgtg
gatggctgctcctgctctgagggtctctacctaaatgaaaataacatctgcgttcccatg
gcaaaatgtccctgctaccataatgaagtctacgtcaagtcaggaaagtccatcagcatt
aaagaggagcactgcgatgattgtgacttcacagagtgtgaatctggctgccggtgtcca
gatggcctccttgaagatggcaaaggttcctgtgtgaaagaaaatgaatgtccatgtcaa
cacaataaggagatttatgcccatggatcccaaatccctgaccagtgcaacatctgtacc
tgcaaaagtggaagctgggagtgcagtaagaaaaaatgtccaggaacttgcattatttat
gggagtggtcactacaatacatttgatcagcaaacatatgggtttcaaggacattgtgcc
tatgttgctgtaaagaacaaatgtggcaataaaacagtgcaggacaactttggaattatc
acagaaaatgtaccatgtggatctacaggcaccacatgctctaaaactgtcagaatccag
ctggggcgaatggaagtcaaactgtcaaagggtaaatacgaagaggtcaacgtgggaaat
ggtgctgagattccatacagaataaggaaggttggcatgtacgtggtgctagaatctgcc
attggtctggtagtgatgtgggatggcaaaactactgttcgcatcatcctggaaccacag
cacagcggagaggtatgtggcctgtgcggagattttaatggtgatggacagaacgacttc
accacccagggtcagctggttgtgagcagttcgttagaatttgcaaatagttggaaagtg
tcgagccagtgccaagatgtaggtatgaattctgacccttgtggagtaagacccaatcga
catacctgggcaaaaacgatgtgcagcattataactggaaatacgttcaaagactgccac
aataaggttgctccactcccattttatgaaaactgtgtaaaagactcatgtgcctgcgac
actggtggcgactgcgagtgtttatgctcagcagtcgcagcttatgctcaagcttgtaat
gcagcttctgtctgtgtggcatggagaacaccagacatctgtcctgtgttttgcgattac
tataataacccagatgaatgcaagtggcactacaacccctgccacaaaccttgctacaag
acttgtttgaatccggaagaaatgtgtagtgaacctttacccaacctggaagttatattt
gaagatgaagcttgcaaccacactaccacaacaccagaaccatccactacatttccaacc
ccaacaattggacctactattacaactcaggaaccaaccacaacaaccccaagacctaca
acaacaacaactgaacctactactacaacccaggagccaacaacaacaactgcacctact
actacaacacaggagcctaccacaacaaccccaagacccacaacaacaacaacaacaaca
actaaacctcctactacaattcaggaaccaaccacaacaacaccaactgcatctactact
acaacacaggaaccaaccacaacaaccccaagacctacaacaacaacaactgaacctact
actacaactcaggaaccaaccacaacaaccacaagatctacaacaacaacaactgaacct
actactacaattcaggaaccaaccacaacaactgcatctactactacaacacaggagcct
accacaacaaccccgagacctacaacaacaacaactgaacctactactacaattcaggaa
ccaaccacaacaactgcatctactactacaacacaggagcctaccacaacaaccccaaga
cctacgacgacaacaataacaactgcatctactactacaacacaggaaccaaccacaaca
accccaagacctacaacaacaacaactgaaccaactactacaattcaggaaccaaccaca
acaaccccaagacctacaacaacaacaaatgaacctactactacaactcaggaaccaacc
acaacaacaacaacaacaacaactgcatctactactacaacacaggagcctaccacaaca
accccaagacctacaacaacaacaactgaacctactactacaattcaggagccaaccaca
acaacacaatctacaatcccaccaactggacctacaactacaacccaggagactttctca
cctgtgactggtcccccgttggtaacatcagtgcctgcatcaactgcccctgttatctct
cccactacacaacacgaatcaaccataacaaccacaaaatctacaacaacaacacctgaa
cctactactacaactcaggaaccaaccacaacaacaaaaactgcatctactactacaaca
caggagcctaccacaacaaccccaatacctacaacaacaacaacaactgaacctactact
acaacccaggaaccaaccacaacaaccacacaatctacaaccccaccaactgatcttact
acaccctgtagagcctactacaacgacaacaactgcatctactacaacaacacaggagcc
taccacaacaaccccaagacctacaacaacaactgcatctactacgacaacacaggagtc
ttccacaacaaccccaagacctacaacaacaacaacaataactgcatctactactacaac
ccaggagagcctactacaacaaccacaaaatctacaacaacaacaacacctgaacctact
cctacaactcaggaaccaaccacaacaacaataactgcatctactactacaacacaggag
cctaccacaacaaccccaagacctacaacaacaacaactgcatctactactacaattcag
gaaccaaccacaacaactgcatctactactacaacacaggagcctaccacaacaacccca
agacctacaacaacaacaaatgcacctactactacaactcaggaaccaaccacaacaacc
ccaagacctacaacaacaacaactgaacctactactacaattcaggagccaaccacaaca
acaacaactgcatctactactacaacacaggagcctaccacaacaaccccaagacataca
acaacaacaacaaatgaacctactacaacaactcaggaaccaaccacaacaaccccaaga
cctacaacaacaacaactgaatctactactacaaccatagagccaaccacaacaacacaa
tctacaatcccaccaactggacctacaactacaacccaggagactttctcacctgtgact
ggtcccccgttgcaaaatgagaccttcatagtgtgcaactgcaccatggccagatgcatt
gagaataatacaattgaaataattccatatgaatgtccagcccttgagaacatcacttgt
accaatggaaaggacccagttcttgtggatgatgagtaccactgctgccagtattacgct
tgtgactgtgtttgtgaaggctggggagatcctcattacatcacatttgatggattatac
tacagttatcaaggaaactgtacttacatcttaatggaagagattttaccaaaacatcat
ttgaacatttatattgagaatgtatattgtgatcccactgaagatgtttcttgtccacga
tcaataattatatcgtaccaatcagaagttgtcacacttataaatcataaccttcttgga
gcagcacagttggaggcacggaacaatggaatccgtctgaaactaccttattcacataaa
ggttttaaaatcttggattctggcattaacttgattttggagatccctaaactagaagtg
gtcattacatttggaataactggctttagtgtcacccttccatatcaaagttttggaact
aacacacagggccattgtggaacatgcaataacaaccaggctgatgactgcaagctgccg
ggaggcaagttaatagaaaattgtgcagtgatggccgactattggcctgcaaaacacatt
catcaacccaactgccaaataccatcagtactgcccaccaatatacctggacctccacca
acctttactccatgcaatccagactccatatgtcacatgcttaagagcagtctctttgca
gcgtgccattcctttgtctctcctgagaatttctaccaagcttgtgtttttgatagctgc
catgtttccaacccagcagtggagtgcacaagtttgcagacttacgctgctgcctgtgct
caggcgggagtttgtctgcattggaggaaccacaccagcctgtgtgcaaataactgccca
tcaaacaaagtttacaagccatgtggtcctgcagaacaaccaacctgtgaagacaatcct
aatgaatcaaccatgaactacaccactgagggctgcttttgtcctgatggaatgaaactc
ttcaacaaagagtctatcatatgtgtagataagtgtggatgtctggatcctgagggcatt
ccccgtgagtttaatgagaggtttgagtacaaatgccaaaactgcatctgtgaggagtac
atcaagactgtgacttgcaaaccgaagacatgcccaacacgacctatagcagaatgcact
gaccctgggttcgtccttgtcaaccaaactaatccgtcagactcctgctgttctacctat
gtttgccaatgtcaaagcaatagttgcccattctacgacatgaactgtcaggtaggatat
atgccagttgtccatgttcctgagggaaagtgctgtgcagaacgtacctgtgagccgaaa
agagtttgtgtccacaaaaaatctgaatatcagcccggctcttcagttcctggacctcaa
tgtcaggattgtacctgtaccactgagatggaccccggttctggtttatttatgatacgt
tgtgagattcagaaatgtcaacagaactgtgacatgggatatgaatatctggaaacagat
tcaaatgaatgctgtggcaagtgtgtacagacacactgtgttctcagtttaaatgatacc
aagaacctcttgaagccgagagagacttggtcaccaccgaagaataagtgtcagcattac
acctgtattaagatcggtgatactttcacaacattcaattcaaacattatctgcccgcca
tatcagccgagcaactgtcacccaggcacaattcagactacagcagatggctgttgtaca
acgtgtgtggagagggagaaggcctgcaagttagtatccatgaaaacgagtgttaggcac
aacagctgtcagtctgaacaggaggtagatataccatattgtgaaggatcctgcaacact
ttcaccaagtactccgatgcagcggctgctttgcagcaatcttgctcctgctgtagggag
tcacgctccagcaatcgcactgttgacctgcactgttggaatggagatgtggttcccttt
tcatacacctatgtggaggactgtggctgtggccacacagactgcaccagagctaatgca
caacttcctcgcaggaggcgaagctcaacactggtgtaa
DBGET
integrated database retrieval system
