Pseudoliparis swirei (Mariana hadal snailfish): 130194995
Help
Entry
130194995 CDS
T09868
Name
(RefSeq) zinc finger homeobox protein 3-like
KO
K09378
zinc finger homeobox protein 3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130194995
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
130194995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_ZFHX3
zf-C2H2
zf-Di19
zf-H2C2_5
zf-met
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
130194995
NCBI-ProteinID:
XP_056272197
LinkDB
All DBs
Position
6:14680039..14693623
Genome browser
AA seq
2362 aa
AA seq
DB search
MTIMHSRNSCKTLKCPKCNWHYKSQHTLQVHMKEKHPETGGQCVCGYCSSGKPHPRLARG
ETYACGYKPYRCEVCDYATSSKGNLSIHMQSDKHLHNVQNGGHSNGHMHTSLITTNNNSS
SSDGNAVDEPAYKPPLSNPTPTIQPTKLPPPAHTHSHGKRWRCDVCDYETSIARNLRIHT
TSEKHTHNMLRLQRGYYLSHCRSLAPQLKHLTNAGAELSLNMRLTSQQVADQPVTLGSTL
TPSPSPSPSPPPALSLSPTEPLSQGGVFQCLVCSCFSSDSLESVEQHLNAPRSLPQSEWC
SLVAGGCHCRLCGYTTQLRANFSLHCQTDRHRTRYQLAAHLQEGGDRGQEGAALIAKGNP
VQLRCNLCDYVTSSLDKLRGHSLNSHHEASVRVYRFLQQYDGEVDGGSWLFHCLLCNHSS
SSKLQVLKHSQTPTHQQREGLLQLQPMGGEELAAIFTIRKSPDGVTGELSEDMETSSETT
TGPLDTTKDTCNFVGISDETEETWEEEREKRESFPSVKRPSSECEEIENSILTKRPRIHQ
QNPNQQTVQCPLCQVKLQHADLRQHLTHVHSVAQDCVDKLISTVTLSMEQPHPQLQTEPQ
LDDTQKNKNTKNINANCSHTADSSASVDSQKNQGISVVSNTKGDVAAPKDVTALLTPPLE
DNTTHPSSGRLAPQSPNQTPPSSPTGDPPPLSDRHGYRFRCSRCSLAFPTQEKLQLHWQY
HAMRAATECPICSRRCRSQEALQRHMQNTHSPLENTQAQNTLLPLHTAQYMEQNKSSVQQ
DLSLSPQVGQEAGVGEDEEREEEALGMVGKEEQKEEVQFKEKDMVGEVDGDEEDLTEPEK
GPHEEILSEPTSSSFFKKSSNPTMDRYLDPTRPYKCTICSESFTQKTILLVHYNSVSHLH
RARRAQQDSGTGVAVPEAPRGPDPRPYRCRLCGVGYSQSSTLDIHLRSVLHQTRARAAQN
SAPQNPASSVAAPVSVPTTATQAATNREEIPKGLLFTKRPDLVSSSTSLLLGPGLAAEAQ
PTLSIPSDSQQAKSRVAELIASRNQLMLIQQQQLAQAQAQAQVQLQQHTALLQSQLMQHL
PFGTENLLKQHFSLTPDNLLSLQQQLLLPFYLSGDMHMNPELTVKSLELSQLVCANSIPK
EQVMVEVKREPQPQIDDKLTQRQRSNSAVSQPKDRVQCEANVEAGCSGSCNSQSEKRHIN
YNIEEEKEEMPVPTLKNKKEETDSSSFTPPGLQCPPPRVPYAAVNGEPVRALLQSYGYEL
ALQYIQSRHRNQQQITTLLMPDKQECADINKMEVCSEEERVELSGLQDVKLAGCNNDNEG
VEGNGEIENVPHDKKKKDEESVNKEKGRCGRGEKCRDCGKFFSDALILKSHREYIHRKLF
PTPALERFSREYRLQYDQMYPLTQPKSGENSAAAPVPSSESEPALESVMPQVKSLAPSPE
PSFSDPVTKTCTLATDLTITTPTPSSPFLSQTEEFPKQEASIPSTAATATSQTTSIANAT
PLTLPNIPMLPLALPQLPISQLSHIPFSMDLLPSVVMQSVGLQAQPWFDSSVNTELAILY
QSQLNTALLMQQPQRTRTRISEEQLTVLRKHFDINSLPSDEEMIKMCGLSGLPHKVIKHW
FRNTLFKERQRDKDSPYNFNNPPTIALEVSGEPQTTDLLRDETHRGRLSSRTRFTEQQLE
TLQGVFEATPYPREEEYDSLSALLGLPNRIIVVWFQNARQRARKTQDQGTDDGLEEKNQL
DNIHSQRNGCSMNDDDEAQGESQNENSMDLTYEYYTNPDSPVLVSASHCIESEHLTANGE
PIPVTSKQEDTQEDKTYYQANKSLALVQIKKEISDEEIQHIEIVQALKTASSPQLKPNLQ
PESTPERLPRSSSSLQKTAPAIASTAHSSQGHTCSPPSDPAVEKPVDTSPSLPAASESDT
SHIRLPDATSCLSVETQQITPLQTQAQFQCSLCPVSLPSFQLWQEHQTRHLLATQSQVQF
LHSGFTDRTMPYMMLHPNHTLMASQMLSDAMSQMHPNPTHSTSLSQSSLSPMKQSPKLMS
ETSFEGQRSSREIEEEHRRDKRQRTTITPEQLEVLYQRYSMDSNPTRGVLEGIARDVGLT
RRVVQVWFQNTRARERKGQFRSMGPGSSFSLGLNHLRCPFCRALFKVKSALDAHMRSRHW
AEAERAGYNLSMSNGSNGQIGMSMSSTMDRPGPSISSNFIPNHGFVIINKELSMKPPLSL
TTDLNNPEEDDDYEEDDEEYPCDEGSSMADQESPSPEGSGGPSSDWGETQSLQQHQHQQQ
RQRTQMSHFQVLQLRDFYRSHRTPNRHECETLGQELGLPHRVVQVWFQNARAKEKRARSL
SSDSAEREQAELSAGAGERDRA
NT seq
7089 nt
NT seq
+upstream
nt +downstream
nt
atgaccataatgcactcacgcaactcctgcaagacgctaaaatgccccaagtgtaactgg
cactacaagtcccaacatacattgcaagtccacatgaaagagaaacatccggagacggga
ggccagtgtgtgtgtggatattgcagttcggggaaaccccatcctcgcttggcccgtggc
gaaacctatgcctgtggctacaagccctaccgctgtgaggtgtgtgactatgcgacctca
tcgaaaggcaacctcagcatccacatgcagtcggataaacaccttcataacgttcaaaat
gggggacactcgaatggtcacatgcacacttctctcatcaccacaaacaacaacagcagc
tcctccgacggtaacgcagtggatgagcccgcatacaagcccccgctctctaatcccacc
cctactatccagcccactaagctcccaccacctgcacacactcactcccatggtaagcgg
tggcggtgtgacgtgtgcgactatgagaccagcattgcccgcaacctgcgcatacacacc
accagcgagaaacacacacataacatgctacggctccagagaggctactacctgtctcac
tgtcggagtctcgccccgcagctgaaacacttaacaaacgcaggtgcggagctctccttg
aacatgcgactgaccagtcaacaagttgcagatcagccagtcaccctcgggtcgacactg
actccttctccctccccctccccctctccccctccagccctgtctctgtcccccacggaa
cctctctcccaggggggcgtgtttcaatgccttgtctgctcctgcttttcgtccgacagc
ttagagtctgtggagcagcacctgaacgcccctcgctctctgccccagtctgagtggtgc
tccctggtcgctggtggctgccactgcaggctgtgcggttacaccacccagctgagggct
aacttctccttgcactgtcagactgacagacaccgcacccggtaccagcttgctgctcac
ctccaggagggtggggacaggggtcaggagggggctgcccttattgctaaaggcaacccc
gtccagctgcggtgcaacctgtgtgactacgtgaccagcagtttggacaagctgcgagga
cattccctcaattcccaccacgaggccagcgtccgggtttaccgattcctgcagcagtat
gatggtgaagttgatgggggatcgtggctgttccattgtctcttatgcaaccactcctcc
tcttctaaactacaagtactgaaacacagtcaaacaccaacccatcagcagagggaaggg
ctactccagctgcagccaatgggcggagaggagctggcagccatttttaccatcaggaaa
agccctgatggtgtcaccggagagctcagtgaggatatggaaacgtccagtgagaccacc
actggtcctttggacacaaccaaagacacttgtaactttgtggggatttctgatgagaca
gaagaaacttgggaggaggaaagagaaaagagggagtcatttccatcagtgaagcgtcca
tcctccgaatgtgaggaaatagaaaactcgatcttaaccaaacgtcccagaatacaccag
caaaatccaaaccagcagactgtccagtgccctttgtgccaggttaaactccaacacgca
gaccttcgacagcatctcacgcatgtgcacagtgtggcacaggactgtgtagacaagctc
atcagcacagtcacactatccatggaacaaccccaccctcagctgcagacagaaccacaa
ttggatgatactcagaaaaataaaaacaccaagaatatcaatgcaaattgttcccatact
gctgattccagtgcctcagttgattcacagaaaaaccaaggcatttcagtagtgagcaac
actaagggagatgtagccgcacccaaagatgtcacagctctactcaccccacccctagaa
gacaacaccactcacccttccagtggcagactggctcctcagtccccaaatcagaccccc
ccctcctccccgaccggtgacccccctcctctttctgatcgccatggttaccggttccgt
tgcagcaggtgcagcttggcgttccccactcaagagaagctccagctgcactggcagtac
catgccatgagggcggcaacagagtgccccatctgctctcgacgatgccgcagtcaagag
gccttgcagagacacatgcagaacacacactcaccgctggaaaacacacaggcacagaat
acactcttaccgcttcacacagctcaatacatggagcaaaacaagagttcagttcaacaa
gatttgagtttatcacctcaagtgggtcaagaagcaggagtgggtgaggatgaagagaga
gaggaagaagccctaggcatggtgggaaaggaagaacaaaaagaagaggtacaatttaaa
gagaaggacatggtcggtgaagttgatggagatgaggaagatttaactgagccggagaaa
gggccacacgaggagatcctatcagaacctacttccagctcttttttcaaaaagagctcc
aaccccacaatggaccgctatctggatccaaccaggccctataaatgcacaatatgctct
gaatcttttacccagaaaactattcttctggtccactataactctgtgtcccatctccac
cgggccagacgggcccaacaggactctggcacaggtgttgctgtccccgaggctccccgt
ggcccagatcctaggccctaccgctgccgattgtgtggagtgggctatagccagagctcc
acactggacattcatcttcgctctgttcttcatcagactagagctcgtgctgcccagaac
tcagctccacagaacccagcatctagtgtagctgctccagtgtcagtccccaccactgct
actcaggctgctaccaacagagaagaaataccaaagggtttgctgttcaccaagaggcca
gatctagtaagctcttcaacctctttactattaggccctggcttagcagctgaggcgcag
ccaaccctttctatcccaagtgacagccagcaggctaaaagtagagttgcagaacttata
gcatcaagaaaccagctaatgctaatacaacagcagcagttagcccaggcccaggcccag
gcccaagttcagttacagcaacacacagctctgctccagtcccaattgatgcagcatctt
cccttcggaacagagaatctcctgaaacaacacttctccctgacaccagacaacttgctc
tctctgcagcagcaacttcttctgccattttatttgtcaggagacatgcatatgaaccca
gagttaactgtgaagagcctagagcttagccagttagtatgtgccaactccatccccaaa
gaacaggttatggtggaagttaaaagagagccccaacctcaaatagatgacaaactaacc
cagagacaacgttcaaactcagctgttagccaaccaaaggatcgtgtgcagtgtgaagcc
aatgttgaagctgggtgcagtggatcttgcaacagccagtcagaaaaaagacacatcaat
tataatattgaggaagaaaaagaagaaatgcctgttcctactttaaaaaataagaaagag
gaaacagattcctcttcatttactcctcctggattgcagtgtcctcctcccagagtgccc
tatgcagctgtgaatggcgagcctgttcgagccctgctgcagagttatggctatgagttg
gcactgcaatacatacaaagtagacatagaaatcagcagcagataacaacccttttgatg
ccagataaacaggagtgtgctgatatcaacaagatggaggtatgctcagaagaagaaaga
gttgagttaagtggactacaggatgtaaagctggcaggctgtaacaacgataacgaagga
gtagagggcaatggagaaatagaaaatgtgccacatgacaaaaaaaagaaagatgaggaa
tcggtaaacaaagagaaaggtcgttgtggaaggggagaaaagtgtagagactgtggcaag
tttttctcagatgccttgattttaaaaagtcaccgggagtatattcataggaaactgttt
cctactcctgcactggagagattctccagagaatacaggctgcagtatgaccagatgtac
ccgctcacacaacctaaatctggggagaattcagctgccgccccagtcccaagctcagaa
tcagaaccggcactggaatcagttatgcctcaagttaaaagcctcgcaccctcacctgag
ccgtcattttcagatcctgtaaccaaaacatgtactcttgctacagacttaacaataact
actcccacaccttcttctccatttctttctcaaactgaagaatttccaaaacaagaggct
tccatcccaagcacagctgctacagccacttctcaaaccacatccatagctaacgccaca
cctcttaccttaccgaacatacccatgcttcctctagctttgcctcagcttcctatatcc
caactgtcccatattccattttccatggacctgctcccttcggttgtgatgcagtctgtg
ggtctccaggcccaaccttggtttgattcaagtgtgaacaccgagttggcaatactctac
caatctcaactcaacacagcactgctaatgcaacagccacaaagaacccgaacccgaatc
tctgaggagcaactgactgtcctgaggaaacactttgatattaacagcctccccagtgat
gaagagatgatcaagatgtgtggtctctctgggttgcctcacaaagttatcaaacactgg
tttcgcaacaccctatttaaagagcgccagcgagacaaggattccccttacaattttaac
aacccgccaaccatagccctggaggtgtctggagaaccccagacaacagacctactgaga
gatgagacccatagaggcaggctctcttcccgaacccgcttcaccgaacaacagctggag
accctgcagggggtgtttgaggcgactccctatcctagagaggaagaatatgacagctta
tctgctttgttgggcctccctaacagaatcattgttgtgtggttccaaaatgcaagacag
agagcccgtaaaactcaagaccaggggacagacgatggattagaggagaagaaccaactt
gacaacattcacagtcagagaaatggctgctccatgaatgatgatgatgaagcacaaggg
gaatctcagaatgaaaactccatggatctgacttatgagtattacaccaaccctgactcg
cctgttcttgtttccgcttctcactgcatagaaagtgagcatctaacagccaatggtgaa
ccaataccggttacgagcaaacaagaagatacacaagaagataaaacatattatcaagcg
aacaagagcctagctcttgttcaaattaaaaaggaaatttcagatgaagaaatccagcat
attgaaattgttcaggccttgaaaaccgcatcttctccacaactaaagcccaatctgcag
ccagaaagtactccagaaagactacctcgctcctcttcctctttacaaaagacagcaccg
gccatcgcatccacagctcattccagccaggggcatacatgcagccctccatctgatcca
gctgttgaaaagcctgttgatacatcacccagcctccctgctgcttcagagtctgacaca
agccacattcggctgcctgatgccacctcttgcctatccgttgaaacccagcagataacc
ccactccaaacgcaggctcaatttcagtgtagtctctgcccagtgtccttgccctcattc
cagctgtggcaggagcatcagaccaggcacctcctggcaactcagtcccaggtccaattt
ctccactctggcttcacagaccgaaccatgccttacatgatgctccaccccaaccacacc
ctgatggccagccaaatgctttcagacgctatgtcccagatgcaccctaatcccacacat
tccaccagcctttctcaaagttccctgtcaccaatgaagcagagtccaaagcttatgtcc
gagaccagttttgaaggccaaaggagcagtagagagattgaggaagagcaccgcagggat
aagcgtcagagaaccaccatcaccccagaacagcttgaagtgttgtatcagcgctacagt
atggactctaaccccaccagaggagtcctggaaggcattgcacgggatgtaggcctgaca
agacgtgtagttcaggtctggtttcagaatacacgagccagagagagaaaaggacagttc
cgatcaatggggccaggatccagtttcagcttgggtttgaaccacttgcgctgcccattc
tgcagggctctcttcaaagtaaagagtgctcttgatgcccacatgaggtcacgccactgg
gcagaggctgaaagagcaggctacaacttatcgatgagtaatggatccaatgggcagatt
gggatgtctatgtcatctaccatggacagaccaggcccatctatctcctctaacttcatc
ccaaaccatggctttgtcatcattaacaaagagttaagtatgaagccacctttgtcttta
accactgatctgaacaacccagaggaggatgatgactatgaggaagatgatgaggagtac
ccatgtgacgagggttccagtatggctgaccaagagtctcctagtcctgagggatctggt
ggtccaagctcagattggggtgaaacgcaaagtctgcaacagcaccaacatcagcagcag
cgccaaaggacacagatgagccacttccaggtactccagctcagagacttctacaggagc
caccgtacccccaaccgacatgagtgtgaaacactgggccaggagttgggactgcctcac
agagttgtgcaggtctggttccagaatgccagagccaaggagaagagggccaggagcctg
agctctgactctgcagagagggagcaggccgagctgtccgcaggggcaggggagagagac
agagcttaa
DBGET
integrated database retrieval system
