Pseudoliparis swirei (Mariana hadal snailfish): 130194998
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Entry
130194998 CDS
T09868
Name
(RefSeq) B-cadherin-like
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04371
Apelin signaling pathway
pswi04514
Cell adhesion molecules
pswi04520
Adherens junction
pswi05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
130194998
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130194998
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
130194998
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
130194998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130194998
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pswi04515
]
130194998
04090 CD molecules [BR:
pswi04090
]
130194998
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
130194998
Cell adhesion molecules [BR:
pswi04515
]
Cadherins
Major cadherins
130194998
CD molecules [BR:
pswi04090
]
Proteins
130194998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_4
BACON_2
RibLong
Motif
Other DBs
NCBI-GeneID:
130194998
NCBI-ProteinID:
XP_056272199
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All DBs
Position
6:complement(15456220..15465896)
Genome browser
AA seq
532 aa
AA seq
DB search
MTEHRRTLKVLSVRGQVLSNWDVDLEQRPTAEFTHVSGSLKRMKREWVMPTINFPENDRG
PYPKFIVKIKSNNEKKVSITYSITGPGADQPPEGVFTVDRRSGVLFVTQPLDRENTAKYS
LWVHTLNEGIKAEEPMELIINVVDQNDNAPTFTPDLFDGRVSESAGTGDSIIKVTAVDED
DPQTNNAVIRYRIKAQTPTLDVFAVNPVSGMISVKAGGLDRETQPEYQLTIEAADMEGEG
LTSTCAVFISITDSNNNAPQFTVTSISTSVQENEVGVEVTRLEVTDEDELGSPNANTKYS
IIKGDEGGDFLITTGSERGRGILKTAKGLDFESLPAFTLLVVVTNEVPLSGLASTSTATV
TVTVTDKNEPSVFSPAEIHVSISEDAKTESSVADLGAQDPDTARRQSVRYKLHNDTARWL
SIDTDSGSVKVKNNMDRESHYVKDSKYTVLVLAFDNDTVPATGTGTLVVTLLDVNDRHPV
IKQRKARLCNRDPVPALLDIVDPDGPGHAGPFSVELRGEHRTNWTMNTNSTM
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgacggagcaccgaaggactttgaaggtgctctctgtacggggccaagtgctgagcaac
tgggacgtggacctcgagcagcgccccacagctgagtttacacacgtgtctggcagtttg
aaacggatgaagagggagtgggttatgccaacaattaactttccagaaaatgacaggggt
ccatatcctaaattcattgttaagatcaagtcaaacaatgagaaaaaggtgtcgataacc
tacagcatcactggaccaggtgctgaccagccccccgagggtgtttttactgtcgatcgg
cggtctggagtgctgttcgtgacccagccactggaccgggagaatacagcaaaatacagt
ctgtgggtccatacactgaatgagggcatcaaggctgaggagcccatggagctcatcatc
aatgtcgttgaccagaatgacaacgctcccacatttactccggaccttttcgatggcaga
gtgagcgaaagcgccggcactggtgactccatcatcaaggtaacagcagtggatgaagac
gacccacagacgaacaatgctgtgatacggtatagaataaaggctcagacgcccacactg
gacgtgtttgccgtaaacccagtgagtggaatgatcagcgtgaaggccggcgggctggac
agagagactcagccagagtaccagctgaccattgaggctgctgatatggagggagagggg
ctaacgagcacctgcgctgtcttcatcagcatcactgacagcaacaacaatgctccacaa
ttcaccgtcacatctatatccacatcagtccaggagaatgaagttggagtggaggtaaca
cgattagaagtcactgacgaggatgagttaggatctccaaatgccaacaccaaatattca
ataatcaaaggcgacgaggggggagacttcctcatcaccacgggctccgagagagggcga
ggaatccttaaaacagccaaggggctggattttgagagcttacctgcctttactctgctg
gtggtggtgaccaacgaggtgccgctttctggacttgcgtcgacctcgacggccacggtc
accgtgacggtcacggacaagaacgagccgtctgttttcagtccagcagagatccatgtg
agcatctcagaagatgccaaaacagagagctctgtggccgacctcggagcgcaggacccc
gacacagccaggagacagagcgttagatacaaactacataatgacactgccaggtggcta
agtattgatacagactcaggatcagtcaaagttaaaaacaacatggacagagaatcacac
tatgtcaaagacagcaaatacacagtcctggttttggctttcgacaatgataccgtccca
gcgacagggacgggcactctggttgtgactctattagatgtgaatgaccgtcatcctgtg
atcaagcagcggaaagccaggctgtgcaatagagatcctgttcctgcgctgctggatata
gtggatccagacggaccgggtcatgctggaccgttttctgtggagcttcggggagagcac
cggaccaactggactatgaacaccaattccacaatgtga
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