Pseudoliparis swirei (Mariana hadal snailfish): 130194998
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Entry
130194998 CDS
T09868
Name
(RefSeq) B-cadherin-like
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04371
Apelin signaling pathway
pswi04514
Cell adhesion molecule (CAM) interaction
pswi04517
IgSF CAM signaling
pswi04518
Integrin signaling
pswi04520
Adherens junction
pswi05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
130194998
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
130194998
04517 IgSF CAM signaling
130194998
04518 Integrin signaling
130194998
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
130194998
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
130194998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130194998
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pswi04515
]
130194998
04090 CD molecules [BR:
pswi04090
]
130194998
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
130194998
Cell adhesion molecules [BR:
pswi04515
]
Cadherins
Major cadherins
130194998
CD molecules [BR:
pswi04090
]
Proteins
130194998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Cadherin_2
Cadherin_4
BACON_2
RibLong
Motif
Other DBs
NCBI-GeneID:
130194998
NCBI-ProteinID:
XP_056272199
LinkDB
All DBs
Position
6:complement(15456220..15465896)
Genome browser
AA seq
532 aa
AA seq
DB search
MTEHRRTLKVLSVRGQVLSNWDVDLEQRPTAEFTHVSGSLKRMKREWVMPTINFPENDRG
PYPKFIVKIKSNNEKKVSITYSITGPGADQPPEGVFTVDRRSGVLFVTQPLDRENTAKYS
LWVHTLNEGIKAEEPMELIINVVDQNDNAPTFTPDLFDGRVSESAGTGDSIIKVTAVDED
DPQTNNAVIRYRIKAQTPTLDVFAVNPVSGMISVKAGGLDRETQPEYQLTIEAADMEGEG
LTSTCAVFISITDSNNNAPQFTVTSISTSVQENEVGVEVTRLEVTDEDELGSPNANTKYS
IIKGDEGGDFLITTGSERGRGILKTAKGLDFESLPAFTLLVVVTNEVPLSGLASTSTATV
TVTVTDKNEPSVFSPAEIHVSISEDAKTESSVADLGAQDPDTARRQSVRYKLHNDTARWL
SIDTDSGSVKVKNNMDRESHYVKDSKYTVLVLAFDNDTVPATGTGTLVVTLLDVNDRHPV
IKQRKARLCNRDPVPALLDIVDPDGPGHAGPFSVELRGEHRTNWTMNTNSTM
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgacggagcaccgaaggactttgaaggtgctctctgtacggggccaagtgctgagcaac
tgggacgtggacctcgagcagcgccccacagctgagtttacacacgtgtctggcagtttg
aaacggatgaagagggagtgggttatgccaacaattaactttccagaaaatgacaggggt
ccatatcctaaattcattgttaagatcaagtcaaacaatgagaaaaaggtgtcgataacc
tacagcatcactggaccaggtgctgaccagccccccgagggtgtttttactgtcgatcgg
cggtctggagtgctgttcgtgacccagccactggaccgggagaatacagcaaaatacagt
ctgtgggtccatacactgaatgagggcatcaaggctgaggagcccatggagctcatcatc
aatgtcgttgaccagaatgacaacgctcccacatttactccggaccttttcgatggcaga
gtgagcgaaagcgccggcactggtgactccatcatcaaggtaacagcagtggatgaagac
gacccacagacgaacaatgctgtgatacggtatagaataaaggctcagacgcccacactg
gacgtgtttgccgtaaacccagtgagtggaatgatcagcgtgaaggccggcgggctggac
agagagactcagccagagtaccagctgaccattgaggctgctgatatggagggagagggg
ctaacgagcacctgcgctgtcttcatcagcatcactgacagcaacaacaatgctccacaa
ttcaccgtcacatctatatccacatcagtccaggagaatgaagttggagtggaggtaaca
cgattagaagtcactgacgaggatgagttaggatctccaaatgccaacaccaaatattca
ataatcaaaggcgacgaggggggagacttcctcatcaccacgggctccgagagagggcga
ggaatccttaaaacagccaaggggctggattttgagagcttacctgcctttactctgctg
gtggtggtgaccaacgaggtgccgctttctggacttgcgtcgacctcgacggccacggtc
accgtgacggtcacggacaagaacgagccgtctgttttcagtccagcagagatccatgtg
agcatctcagaagatgccaaaacagagagctctgtggccgacctcggagcgcaggacccc
gacacagccaggagacagagcgttagatacaaactacataatgacactgccaggtggcta
agtattgatacagactcaggatcagtcaaagttaaaaacaacatggacagagaatcacac
tatgtcaaagacagcaaatacacagtcctggttttggctttcgacaatgataccgtccca
gcgacagggacgggcactctggttgtgactctattagatgtgaatgaccgtcatcctgtg
atcaagcagcggaaagccaggctgtgcaatagagatcctgttcctgcgctgctggatata
gtggatccagacggaccgggtcatgctggaccgttttctgtggagcttcggggagagcac
cggaccaactggactatgaacaccaattccacaatgtga
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