Pseudoliparis swirei (Mariana hadal snailfish): 130195005
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Entry
130195005 CDS
T09868
Symbol
rfx4
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor RFX4
KO
K09174
regulatory factor X 4
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130195005 (rfx4)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Other basic domains
RF-X
130195005 (rfx4)
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Gene cluster
GFIT
Motif
Pfam:
DUF5018-rel
Motif
Other DBs
NCBI-GeneID:
130195005
NCBI-ProteinID:
XP_056272207
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Position
6:complement(16512145..16529493)
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AA seq
673 aa
AA seq
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MHCGLLEEPDMDSTESWIERCLNESESKRYSSHTSLGNMSNDEPLVFCICTLKTSFTRSP
SALLRYHYYGIAVKETSQYYDVMYSKKGAAWVNETGKKEVTKQTVAYSPRSKLGTLLPEF
PNVKDLNLPANLPEDRVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLP
VLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKIALHDL
PENLRNIKFELSRRFSQILKRQTSLNHLCQASRTVINSVDITFQMLEDWRNVDLDSITKQ
TLYTVEDSQEEHRQLIIHLYQEFDHLLEEQSPIEAYIEWLDLMVDRCVVKVAGKRPRFLK
KVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERSNDLM
KAMKGEGSTAEREEEFTXTETTPASPSPASYSPARSVHSVGVSSASSPTAAVSPEYTGVT
PTTGAVQSYTWSLTYTVTTASGSTPEAGQQLSCMRGSPPLPPPSSTQRMPVYREEHGYTG
SYNYGSYANQHPHSIQSQYPSLAHEPAITTPLHYSAYHRSSAQYQLNGQMSRMEPCLMGS
TPRLHPAPVAPRWPDVSPANSCYTSPPMHSSRYAASGELYSPLGPRRNSEYEHSQHFPGF
AYINGEATTGWAK
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcgggctgctggaggagcctgatatggattccacagagagttggattgaaaga
tgcctcaacgagagtgagagcaagcgatattccagtcacacgtctctggggaacatgtcc
aacgatgaacctctagttttctgtatttgtaccttgaagacgtcattcacccgctcgccc
tctgctctcctcaggtaccactactacggcatagccgtgaaggagacctctcagtattat
gatgtgatgtactccaaaaagggagcggcgtgggtgaacgagacggggaagaaagaggtc
acgaagcagacagtggcgtattcaccgcgctccaaactgggaacgctcctgccagagttt
ccaaatgtcaaagacctaaatttgcctgccaacctgccagaagacagggtgtcaaccttc
atcatgatgtacagaacgcactgtcagaggatactggacacggttatccgagccaacttc
gatgaggtccaaagcttcttgctgcacttctggcagggcatgcccccccacatgctgcct
gtcctcggctcctccaccgtggtcaacatagtcggggtttgcgactccatcctctacaag
gccatctctggagtgctgatgcccaccgtcctgcaagcactgcctgacagtttgactcag
gttattcgaaaatttgccaaacagcttgatgagtggctcaaaatagcacttcatgacctt
cctgaaaacctgaggaatatcaaatttgaattatccaggagattttctcagattctaaag
cggcaaacatcattaaaccatctatgtcaggcgtcacggactgtgataaacagtgtcgac
atcacctttcaaatgctggaggactggaggaatgtggacttggacagcatcaccaagcag
acactttacaccgtggaggactcacaagaggagcacaggcagcttattatccacctgtat
caggagtttgaccatctattggaggagcagtctccaatcgaggcgtacatcgagtggctg
gacttgatggtggatcgctgtgtggtcaaggtggcagggaagaggcccaggttcctgaag
aaggtggcccaacagttcctgctgatgtggtcgtgttttgggacgagagtcatccgggat
atgacccttcacagcgcgcccagctttgggtccttccacctgatccacctcatgtttgat
gattatgttctctacctgctggagtccctgcactgccaggagagatccaacgacctcatg
aaggcaatgaagggagagggcagcacagcagagagagaggaggagttcacanngacagaa
accactccagcctctccgtctccagcatcctactctcccgctcgctcagtccactctgtg
ggcgtgtcctcggccagctcccccacagcagccgtgtccccggagtacactggagtcacc
cccaccaccggcgctgttcagtcatatacctggtcccttacatacacagtgacaacggcc
agcggctccactccagaggccggacagcagctgtcctgtatgaggggcagtcctccactc
ccaccaccatcctccacccagcggatgcctgtctacagagaggagcatgggtatactggt
agctacaactatggcagctatgccaaccagcatcctcactccatccagagccagtatccc
agtctggcccatgagccggcgatcacaacccccctccactactcggcctaccaccggtcg
tctgcacagtaccagctcaacggccagatgtctcgaatggagccttgcttgatgggcagc
actccccgattacaccccgcacccgttgccccccggtggccagatgtgtcgccagctaac
agctgttacaccagcccacctatgcattcatcccgctatgccgcctctggggaactgtac
tctcccctgggcccacgcaggaactcagagtacgaacactcgcagcatttccccggcttt
gcctacatcaacggagaggccaccacgggctgggcaaaataa
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