Pseudoliparis swirei (Mariana hadal snailfish): 130195016
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Entry
130195016 CDS
T09868
Name
(RefSeq) zinc finger protein 536-like
KO
K27242
zinc finger protein 536
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130195016
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
130195016
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-H2C2_5
Zf-C2H2_ZNF451
zf-Di19
zf-C2H2_REST
ADNP_N
zf-C2H2_15
HSD3
Ribosomal_S10
Motif
Other DBs
NCBI-GeneID:
130195016
NCBI-ProteinID:
XP_056272222
LinkDB
All DBs
Position
6:complement(19866013..19882693)
Genome browser
AA seq
932 aa
AA seq
DB search
MTRNSFITPSTHPIRSQMALLANQIMDARILSSMNGRAELSQFLRVTNQSIVSQVHSTQE
DSRKNRKYPCPLCGKRFRFNSILSLHMRTHTGEKPFKCPYCDHRAAQKGNLKIHLRTHKQ
GIPGKGRGRIREENRLLHELEERAIIRDRQTRAGRVGQQQTSNMNQLQKPQLLQTLPTQP
PFLTMSAAAESQPHTSTSPKVTPIHEDPIQAQPIGFRCSFCKGKFRKQQELERHIRILHK
PYKCTLCEFAASQEEELIGHVETTHITADSASGQKPTMGTGDKKRPAGEFPCEVCGQTFS
QAWFLKGHMRKHKDSFEHCCQICGRRFKEPWFLKNHMKVHLNKLAAKRNLPAEHETSVNM
ENLTQDHQSNLYSQYITRIHNRFLTAKRADHQVYNQLLATAGVDMKVKEMLGRMISSGPG
PLTDAESSSLLGLNHLHPPLSSTSMDYLQKVMSNRDALTTSSSSSSYPGWQIMTPGLPVE
QQLFGLKDQQQSSSYLPERCVPADDGKVGLGDPDAKANSRAGSPRHGQKEMLTETGSSHS
GSGLDHRPQSSSPATGEKVYRCPLSSDYTAAQTASLGFHLDRYHFPHWQNGKDLSSPLQP
TSSSSSSSPNPKLRPRSREDWSPAHYLGENALLINKQPELADKEASVEGSSPALTRKSQY
EPLDLSFRPESAMSHSGMSPAVLVQMAGIFSNGLSSSVARRLQSYSNAAAELGVKPASQC
DLLVQGTREEMNAQDAGSTCRDGEGEFEKSELGRGDEDDAKWMMLKNTILEPEEPDFQSA
GEKKHDKLGLWGRAASDSPISSLENLTPGQADQVQQQGGLLSFFRSQANLSSVPAGAHKG
IGNDFGNMEKDVASARKPFQCRYCPYSASQKGNLKTHVLCVHRKPFDNSLYPDRRLRRSH
TPQRPSGLPQSILGDHLEPGRDQIGMTSLCGT
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgacgagaaacagcttcattaccccgtccacccacccaattaggagccagatggcgctt
ctggccaatcaaatcatggatgcaaggattctcagcagcatgaacgggagagcagagctt
tcccagttcttgagagtcaccaatcaaagcatcgtctcccaggtacattccacccaggag
gacagtcgcaaaaacaggaagtacccctgcccgctgtgtgggaagcgcttccgcttcaac
agcattctgtcccttcacatgcgcacacacaccggcgagaagcccttcaagtgcccgtac
tgcgaccacagggctgcccagaagggcaacctgaagatacaccttcgtactcacaagcaa
ggcattccgggtaaaggccgcgggcggattagagaggagaatagattgctccacgagctt
gaggaaagggcgataataagggacaggcagacgcgcgccggtcgcgtcggccaacagcaa
acatccaatatgaaccaacttcaaaagccccaactgctgcagaccctcccgacacaaccg
ccattcttaaccatgtctgctgctgcagagagccagccgcacacatccacgtctcctaag
gtgactcccatccacgaggatcccatccaggcccaacccatcggcttccgctgctcattc
tgtaagggaaagttcaggaagcagcaggagctcgagcgccacatccggattctacataaa
ccctataaatgcaccttgtgcgagttcgcggcctcacaggaggaggagctcatcggccac
gtggagacgacgcatataaccgccgattcggcatcagggcagaagcccaccatggggacc
ggtgacaagaagaggcccgctggcgaattcccctgcgaggtgtgcggccagacgttcagc
caggcctggttcctgaagggtcacatgaggaaacacaaggactcctttgagcactgctgt
cagatctgcggccgtcgtttcaaggaaccctggtttctcaagaaccacatgaaggtccac
ctcaataagctggctgccaagcgtaacctcccggctgaacacgagacctccgtgaacatg
gagaacctgacacaagaccaccagagcaacctgtactcgcagtacatcacccgcatccac
aacaggttcctcacggccaagagagccgaccatcaagtgtacaaccagctgctcgccaca
gctggcgtggacatgaaggtgaaggagatgttagggaggatgatttcctcaggtccaggc
cctttgactgatgcagagagctcctccttactgggtttaaatcatctccaccctccactg
agctccactagcatggactatctgcagaaggttatgtctaacagagatgctctcaccact
agcagcagcagcagcagctacccagggtggcagatcatgacaccggggctgccagttgaa
cagcaactgttcggtcttaaagaccagcagcagagctcctcctacctgcccgagagatgc
gtccccgccgacgatggcaaagtgggtctcggcgaccccgacgcgaaggccaacagcaga
gccggtagccctcgccatgggcagaaagagatgctcacagagacggggagctcccactct
ggcagcggcctcgaccatcgaccgcaatcctcctctccggctacaggtgagaaagtctac
aggtgtccactctccagcgactacaccgctgcacagacagcctccctcggcttccatctg
gatcgctaccacttcccccactggcaaaacggcaaggatctttcttccccactgcagccc
accagtagcagcagcagctccagccccaaccccaaactcagacccagatccagggaggac
tggagcccagcccactatctcggtgaaaatgccctgctcatcaacaagcagcctgagctc
gctgacaaagaagcgagtgtcgagggctcttccccggctctaaccaggaagtcccagtat
gagcctttagatttgtctttcaggccagagtctgccatgtctcattcaggcatgtctccg
gctgtactggttcagatggctggcattttcagcaatggactctcctcctccgtcgcacgc
cgactacaaagttactccaacgctgcggctgaactcggcgtgaaacctgcgtcccagtgt
gaccttttggtgcagggaacaagagaggagatgaacgcacaggacgccggctccacgtgt
cgcgacggcgaaggtgaatttgagaaatcggagctcgggaggggggacgaagatgatgcc
aagtggatgatgctgaaaaatactatcctggagcccgaggagccggatttccagagtgct
ggcgagaagaagcacgacaagctgggactttggggcagagctgcgtcggattctcccatc
tcctctctggagaacttgactccaggacaggcggatcaagtccagcagcagggcggcctc
ctctccttcttccgatcccaggccaacctgagcagcgtccctgccggcgcccacaaaggc
attgggaacgactttgggaacatggagaaagatgttgcatcagctcggaagccattccag
tgcaggtactgcccctacagcgcctcccagaagggcaacctgaagacccacgtcctctgt
gtccaccgcaagccctttgacaacagcctctaccccgaccgccgcctgcgccgctcgcac
acgccccagaggccctccggattgcctcagagcatcctgggagatcatctcgagccggga
agagaccagattggcatgacatcactctgtgggacttga
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