Pseudoliparis swirei (Mariana hadal snailfish): 130195124
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Entry
130195124 CDS
T09868
Symbol
ankrd27
Name
(RefSeq) ankyrin repeat domain-containing protein 27
KO
K20175
ankyrin repeat domain-containing protein 27
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130195124 (ankrd27)
Membrane trafficking [BR:
pswi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
130195124 (ankrd27)
Others
Specific organelles associated proteins
Melanosome
130195124 (ankrd27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
VPS9
Ank_KRIT1
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
130195124
NCBI-ProteinID:
XP_056272402
LinkDB
All DBs
Position
6:2146398..2175469
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AA seq
1082 aa
AA seq
DB search
MAVYDENILKNLFYMALEKQRPDLCSRVAELHGIVLVPCCESLTGAGFSDSQFESYVLQP
AEDGYLTVDGKEVRIQDRRVLLGSGFPSPSSVAVLFEETFYNAREQSYSILCIARPVEAE
PGPAAAPGPPYRLRSLEDVRSFLGRHGQKLDKFILVFNQSFREQERRGLRHHIDSVNGLY
TKCLQCLLRDSRLKLLAKQELQMTLLKQAVEMYVHHGIHDLIFNFVGTLEAGQDAAFNKT
TRSLQELQQSELGVKPQFSLNLPRAKRELSQLNQQTSPLLKLLCLRRAALTATQTPRGAV
GMEAVCADDLLSVALYLLVKTEIPNWTANLSYIRNFSFSHSGKDELSYSLSTFEAAVAYI
QLGKLQETRSSSGELSDTTLFKERMSLLPQSAATPIHRLFEHIASGSEVEVRRLLSEGEN
NEDVKMCHPLCSCDLCDLTLSGRLNDPSIVTPFSRDDRGYTPLHAAAACGQAQLIDLLVS
KGAPVNATDYHALTPLHLACQRGYQGVTLLLLHYQADPDAQDNNGNAALHLASKYGHEDC
VKALVYYDAPSCLLDLQNEKGDAALHLAARWGYEGVLRALLENGASTGVLNKAGDSPARC
ALNSKILVLLQSTQNRRQRGGVDSPSRSPLASDCSSRRSSVSSTSSQSAEVKPEVERVRR
REVEKLLRAVADGDVEMVRYLLDWIDEKEEEEEEEEGQLLPEASRCHPLCQCPACAPSRK
LSVLQAGALGVNSCSAGGFTPLHVAALHGRSPLAALLIRHGADVNARTEQSATPLHLACQ
HSHVQVVRFLLECNAKLNKKDHYGNTPLIQACLCGSLETTTTLLQSAALLNAVNLQGNTA
LHEAVRGGHQALVELLLRGGASADIRNKRQRTPLDCAYELGGKNTEILRALQKALGLSPD
AEPIKLLSVPKGALAHSFVQRLKLQDSNSSRRQKLAQSISRVQQMKNGSSASPSRCSANL
NQFLPDSRRLRRGETLEVSCPSASRLRERPLGRCHTLDSGEGVARARTASDPFHGDPFQP
RPSPGAPNGESPAPDDRAPESEDAGSSPAFPARLDATIQTEGGDRGDAEQTQEARRREAA
DS
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgtatgacgagaacatcctgaagaacctcttctacatggcgctggagaagcag
agaccggacctctgcagccgagtggcggagctgcacggcatcgttctggtgccgtgttgc
gagagtttgaccggcgccggattctccgactctcagtttgagagttatgtcctccaaccg
gcagaggacgggtacctgactgtggacgggaaggaggtccggatccaggaccgccgggtc
ctgctgggctccggcttcccgtctccgtcctcggtggccgtcctgttcgaggagaccttc
tacaacgcccgcgagcagagctacagcatcctgtgcatcgcccggcccgtggaggcggag
cctggcccggccgccgcccccggcccgccgtaccgcctgaggagcctggaggacgtccgg
agcttcctgggccgccatggccagaagctggacaagttcatcctggtgttcaaccagagc
ttcagggagcaggagaggagggggctgcggcaccacatcgactcggtgaacggtctctac
actaaatgtcttcagtgtcttctgagggactctcgtctgaagcttctggccaagcaggag
ctccagatgacgctcctcaagcaggcggtggagatgtacgttcatcacgggatccacgat
ttgatttttaacttcgtgggaacgctcgaggccggccaggacgccgccttcaacaagacc
accaggagtctgcaggagctgcagcagagcgagctgggagtgaagccgcagttcagtctg
aacctgccccgggcgaagagagagctcagtcagctcaaccaacagacctcccccctcctc
aagctgctctgcctgcgtcgagccgctctgaccgccacccagacgccacggggcgccgtc
ggcatggaggccgtgtgtgcagacgacctgctctccgtcgccctctacctgctggtcaag
acggagatacccaactggaccgctaacctgagctacatccgtaacttcagcttcagccac
tctggtaaagacgagctgagctacagcctgagcaccttcgaggccgcggtggcctacatc
cagctgggcaagctgcaggagacccgctcgagctccggggagctgagcgacacgacgctg
ttcaaggagaggatgagtctcctgcctcagagcgcggccacgcccatccaccgcctgttt
gagcacatagccagtggcagcgaggtggaggtgcggcgcctgctgagtgaaggagagaac
aacgaggacgtgaagatgtgtcatccgctgtgttcatgtgacctctgtgacctcacactg
tctgggcgcctgaacgacccgtccatcgtcacgccgttctccagagacgaccgcggctac
acgccgctgcacgccgccgccgcctgtggtcaggcccagctgatcgacctgctggtgagt
aaaggagcgccggtcaacgccacggactaccacgccctcacgccgctgcacctggcctgt
cagaggggctaccagggagtcacgctgctgctgctgcactaccaggccgaccccgacgcc
caggacaacaacggcaacgcggcgctgcacctggcctccaagtacggccacgaggactgc
gtgaaggccttggtgtactacgacgcgccgtcttgcctcctggacctgcagaatgagaag
ggcgacgccgcgctgcacctggcggcgcgttggggctacgagggcgtcctgagggcgctg
ctggagaacggggcgagcaccggcgtcctcaacaaggccggggactcgccggcgcggtgc
gcgctcaactccaagatcctcgtgttgttgcagtcgacgcagaacagacgccagcgcggc
ggagtggactctcccagtcgatctcctctggcttcagactgcagcagccgccgctcctcc
gtctccagcacctcctcccagagcgccgaggtgaagccggaggtggagcgggtccgacgc
agagaggtggagaagctgctgcgtgccgttgccgacggcgacgtggagatggtgcgttac
ctgttggactggatagatgagaaggaggaggaggaggaagaagaagaagggcagcttctg
cctgaggcttcgcggtgccacccgctgtgccagtgtccggcctgcgctccctctcggaag
ctgtccgtcctgcaggccggcgccctcggggtgaacagctgcagcgccggcggcttcacg
ccgctgcacgtggccgcgctgcacggccgctcgccgctcgccgccctgctgatccgccac
ggcgccgacgtcaacgcccgcaccgagcagagcgccacgccgctgcacctggcctgccag
cacagccacgtccaggtggtcaggtttctgctggagtgcaatgccaagctgaacaagaag
gatcactatggcaacacccctctgatccaggcctgtttgtgtgggagcctggagacgacc
accactctgctacagagcgcggcgctgctgaacgcggtgaacctccaggggaacacggcg
ctgcacgaggcggtgcgcggcggccaccaggcattggtggagctgctgctgaggggcgga
gcctcggccgacatcaggaacaagaggcagaggacgccgctggactgcgcctacgagctg
ggcggcaagaacacggagatcctgagagctctgcagaaagctcttggactttctcccgac
gccgaaccaatcaaactcctgtctgtgcccaaaggagctctggctcattcgttcgtgcag
cgtctgaagctgcaggacagcaacagcagcaggagacagaagctggcccagtccatcagc
agggtccagcagatgaagaatggttcctctgcttcgccctccaggtgttccgccaacctg
aaccagtttctcccggactcgaggcggttgaggcgaggcgagacgttggaggtcagctgc
ccctcggcctcccggctgagggagcgtcctctgggtcgctgtcacacgctggactctgga
gagggcgtcgcccgcgctcgcaccgccagcgacccgttccacggcgacccgttccaaccg
cgtccgagtcccggcgctccgaacggagaatccccggcgcccgacgaccgtgcgccggag
agcgaggacgcgggctcgagtcccgccttccccgcacgcctcgacgccaccatccagacc
gagggaggcgatcggggagacgccgaacagacgcaggaggcgagacgccgcgaggcggcc
gactcgtaa
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