Pseudoliparis swirei (Mariana hadal snailfish): 130195132
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Entry
130195132 CDS
T09868
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7 isoform X1
KO
K09447
interferon regulatory factor 7
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04620
Toll-like receptor signaling pathway
pswi04621
NOD-like receptor signaling pathway
pswi04622
RIG-I-like receptor signaling pathway
pswi04623
Cytosolic DNA-sensing pathway
pswi05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
130195132 (irf7)
04621 NOD-like receptor signaling pathway
130195132 (irf7)
04622 RIG-I-like receptor signaling pathway
130195132 (irf7)
04623 Cytosolic DNA-sensing pathway
130195132 (irf7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130195132 (irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130195132 (irf7)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
130195132 (irf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
130195132
NCBI-ProteinID:
XP_056272422
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All DBs
Position
6:18131203..18135281
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AA seq
438 aa
AA seq
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MQSPPKPQFASWLIEQVETGQYTGLRYEGQNKFRVPWKHNSRKDCNDEDSKIFRAWAVAS
GKIREFPNDKARWKTNFRCALNNLHERFKMIMDNSKNSNDPHKIYEMINTEYNYESLPTQ
DSREDSVITPDIYSSPVECFPSGNEHNLLHTFMALGLGNQISEDQLCAEDYGQHDPTAPA
CYPVAAENQPQPLPDQPSYCDVNPAPVLSSPLQHPSIFDLEISIHYRRREMLKMTLTTAL
LQLHYQQEAPELNGHHLCFPSTDSLLDHKQVEYTNRILNSIQRGLCLEVRDTGIYAWRQD
RCHVFASTSDPSVAHPDPRKLPQNTVVELLNFAKYAHELKQFKENNGGSPDYTINMCFGE
KFPDGKSLEKKLIVVKVVPLICRHFHEMAQMDGASSLHSANVSLQISHNSLYDLINSVFG
LPMDEEPARAAASFIPQS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcagagccctcccaagccccagtttgccagctggctcatagagcaggtggagacgggc
cagtacacgggcctccgctacgaaggccaaaacaagtttagagtcccctggaagcacaac
tccagaaaggactgcaacgacgaagacagtaaaatattccgggcatgggcagtagcaagt
gggaaaatccgagagttccccaacgacaaggccagatggaaaaccaacttccgctgcgct
ctgaacaacctccatgagcgcttcaagatgataatggataactccaagaattcgaacgac
cctcataagatctatgagatgatcaacactgagtacaactatgaaagcctgcccacacaa
gactcccgggaggattctgtcatcactccagatatctacagctcccccgtagagtgcttc
ccctcaggaaacgagcataatctacttcacactttcatggccttgggtcttggcaaccag
atatcagaggatcagctgtgtgcagaggactatggtcagcacgacccaactgcccctgca
tgctatcctgtagcagctgagaaccagccgcagcctctaccagaccagccttcttactgt
gacgtaaatcctgcaccagtcctaagttcacctctgcagcatccaagtatttttgacctg
gagatctccatccactacaggagaagggaaatgctaaagatgacattgaccacggctctc
ctccagctccactaccagcaggaggccccggagctcaatggccatcatctctgcttcccc
tcaacagacagtctgctggaccacaaacaggttgagtataccaaccgcatcctcaacagc
atccagaggggtctgtgcctggaggtacgggacactggtatttatgcctggaggcaggac
aggtgccacgtgtttgccagcaccagtgaccccagtgtggctcacccagacccaagaaag
ctgccccagaacaccgtggtggagctcctcaactttgcaaagtatgcacatgaactgaag
cagtttaaagagaacaacggcggctctcccgattacaccatcaacatgtgctttggcgag
aagttccctgatggaaaatctttggagaagaagctcatcgtagtcaaggtggtccctttg
atctgtcgacactttcatgagatggcccagatggacggcgcttcgtctcttcacagcgcc
aacgtcagcctccagatctcacacaacagcctgtatgatcttattaactctgtctttggt
ctgccgatggatgaagagccagcacgggccgctgcatcttttatacctcagtcctga
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