Pseudoliparis swirei (Mariana hadal snailfish): 130195174
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Entry
130195174 CDS
T09868
Symbol
trit1
Name
(RefSeq) LOW QUALITY PROTEIN: tRNA dimethylallyltransferase
KO
K00791
tRNA dimethylallyltransferase [EC:
2.5.1.75
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pswi01006
]
130195174 (trit1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pswi03016
]
130195174 (trit1)
Enzymes [BR:
pswi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.75 tRNA dimethylallyltransferase
130195174 (trit1)
Prenyltransferases [BR:
pswi01006
]
Compound prenylation
tRNA dimethylallyltransferase
130195174 (trit1)
Transfer RNA biogenesis [BR:
pswi03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
130195174 (trit1)
Prokaryotic type
130195174 (trit1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IPPT
zf-C2H2_jaz
IPT
zf-met
AAA_16
AAA_22
AAA_33
Motif
Other DBs
NCBI-GeneID:
130195174
NCBI-ProteinID:
XP_056272506
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All DBs
Position
1:14647848..14675456
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AA seq
482 aa
AA seq
DB search
MRASVSCPRRCXAEGSCNMAASVGSLRRVVKRATVPALVVVLGATGTGKSKLAIEIGKRL
QGEIVGADSMQVYQGLDIITNKVTAEERAQCRHHMIGFVDPLASGYTVVDFRNKALALIN
DMHGRNKLPVVVGGTNYYIESLLWKVLLNTAQEIEAPADGGDEAPNRKLALEKLGGAELH
KRLAEVDPGMAAMLHPNDKRKIARSLQIHEETGVSHTRWLEEQRGQEGADGLGGPLRYPD
PCIFWLHADMAALDKRLDARVDDMLSAGLVEELRDFHVRHNEQKLRDDSQNYQHGIFQSI
GFKEFHNYLTAPEGITQQEKDALRDKGVEALKIATRRYARKQNKWVRNRFLKRPGHGVPA
VYGLDVTDVSRWEDSVLTPALQVLDSLSKGEEPALQPIRVEGEQQRNKRSRHSCDLCDKV
IIGDLEWTAHLKSKKHHHHARKRRKSDSAACDQSQAAVQRASRESPRDGEASRQEEPVPS
PE
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcttccgtcagctgtccgcgccggtgctgagcggagggaagctgcaacatggcg
gcgtccgttggcagcttgcggcgcgtcgttaagcgagcgacggtcccggctttggtggtg
gttctgggggccaccggcaccgggaagtccaagctggcgatcgagatcgggaagcgactt
cagggagagatagtcggcgccgactccatgcaggtgtaccagggcctcgacatcatcacc
aacaaggtgacggcggaggagcgcgcccagtgcagacatcacatgatcggcttcgtggac
ccgctggccagcggctacacggtggtggacttcaggaacaaagccctggctctcatcaac
gacatgcacggcagaaacaagctgccggtcgttgtcggaggaacaaactattacatcgag
tctctgctgtggaaagtcctgctgaatacagcgcaggagatcgaggcgccggcggacgga
ggagacgaggctccaaacaggaagttggcgctggagaaactgggaggagccgagttacat
aaacgactggcggaggtcgaccccggaatggcggccatgttgcaccccaatgacaaacgc
aaaatagccaggagtcttcaaatccacgaggagacgggcgtctcccacacccgctggctg
gaggagcagcggggccaggagggggccgatgggctggggggcccgctgagatacccagac
ccctgcatcttctggctgcacgccgacatggcggctctagacaagcggttggacgctcgc
gtagacgacatgctgtccgccggactcgtagaggagctcagagacttccacgtccgccac
aacgagcagaagctccgggacgacagtcagaactaccaacatgggattttccagtccatc
ggcttcaaggagtttcacaattacctgaccgctcctgaaggcatcacgcagcaggagaaa
gacgcgctgcgagacaaaggtgtcgaagccttgaagatcgccacgagacgctacgcccgc
aaacagaataaatgggtccgtaaccgcttccttaaacggccggggcacggcgtgccggcg
gtgtacggtctggacgtgacggacgtgtcgcggtgggaggactcggtgctgacccctgca
ctgcaggtcctggacagcctgagcaagggggaggagccagctcttcagccaatcagagtc
gagggggagcagcagagaaacaagcggagccgccactcgtgtgacttgtgtgacaaggtg
atcatcggggacctggagtggacagctcacctgaagtccaaaaagcatcaccatcacgcg
aggaagaggagaaagtcggactccgccgcctgcgaccaatcgcaggccgccgtgcaacgc
gcctcccgggagtcgccccgagacggcgaggcctcgcgccaggaagaacccgtcccgtct
ccagagtga
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