Pseudoliparis swirei (Mariana hadal snailfish): 130195216
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Entry
130195216 CDS
T09868
Name
(RefSeq) rho family-interacting cell polarization regulator 1-like isoform X1
KO
K24818
Rho family-interacting cell polarization regulator
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pswi03037
]
130195216
04990 Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
130195216
Cilium and associated proteins [BR:
pswi03037
]
Other cilia and associated proteins
Stereociliary proteins
130195216
Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
Other domain-containing proteins
HEAT repeat domain-containing proteins
130195216
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PL48
HEAT_2
FAM92
HR1
Motif
Other DBs
NCBI-GeneID:
130195216
NCBI-ProteinID:
XP_056272587
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All DBs
Position
6:25361884..25418165
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AA seq
1122 aa
AA seq
DB search
MYSGYGGSPSRTLSTMSLSVRPARRLNTRSITRSQSFAGVNTYDKTYRTLSVFGAPVLSR
KPSRASRMFIMSKANPPPKVPQPERLDLVYEALKKGLKSYLQVHQVDLDSLSRQIKESKR
NSRLGFLYELDKQVKVTERYIRRLEFHLSKIEELYDAYCLHRRLRDGASKMVKAYTASHL
SKEARESLAEANKGYKEYTENMCLLESDLENQLGEFHIRMKGLAGFARLCSGDQYEIFMK
YGRQRWKLRGRIEINGKQVWDSEDMVFVPLVSDFLSVKVTELKSLANHVVVGSVSCETKD
LFAALPQTVAVDINDLGTIKLSLEVTWNPFDKDDQGSVASTVNKAPTVSKRISTIFNQSP
PDTPSLREQAFYSLPRGVNMRQHWPLLDIFRDTLSQSCSCRDSSPTRPPSANMLRRHEEV
DNGTAWSNSSESSDDSSSPRLSVGGLRNSTHHKSVVVTPDIQPAASGSSSPQPDISSTPN
STHKVSNIRGDPNTSRNRTQSDREEEEGAVTVMTSPDGEEDDAGKQSSTMADGATTIGHA
SRSFSRSLSHISENSADGVMVTDRSADSGEAMSLASGLSVNDIEMELPGRTPPSGIASDS
DMSQTGLITPDDVKDQHRKQLDTSVTVPSPSPPRTKAVDSNTPSQMNTHPPPESNTRPES
GDVSYIARWVVVEEETAAAGVDCLSGEGDGLVDSGLEDALTAVVSSMDDYRGQFPELQLL
EQELQLLQVTLKGGRHSRLPSVVSLTVETALCSFDFLNTSDGEEEEEKGNRRKRSGRSLR
DRDWTSPTSPLTTGSTPLDRCLVVHLKNCSTQLLCLGMFGPLRCGEMFALDRLLREARVL
EIIRRVATGNPNRLRQPADVIPQLGLCLGAVSLWQQCMGPGSVYSVSADGFLETLSTLYT
GVLPERAGNMADTVFLSLVERVLDQRLPRRGGSRDGVMVTLFQLWSYLEANSIIDMETLI
TELAEEVWLVQSLASCDQEVIVPALRCPAECSLRREGLHAVAKLLKDPRGKVSASASSVL
RSLAAQPPQREQALVSCLELLEDEHVDTRVCGCKALACLKAKESIDQLVYLCRTDKDEVR
DAAKQALLVLGEEGKMAYRHVETSQDGIPRLFAPGSMASTAF
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgtacagtggatatggagggagtccatcccgaaccctttccaccatgtcgctgtctgtt
cgccccgccaggcgcctcaacaccagatccatcactaggagccagagcttcgccggagtc
aacacctacgacaagacctacaggaccttgtcggtgttcggcgctccggttctcagcagg
aagcccagcagagccagcaggatgttcatcatgtccaaggccaacccaccgcctaaggtt
cctcagccggagcgactggacctggtctacgaggccctgaagaaaggccttaagtcctac
ctgcaggtccatcaggtggacttggacagcctcagcagacagataaaagaatccaagagg
aactccagactgggtttcctgtatgaactggacaagcaagtgaaggtgacggagagatac
ataagacgactggagttccacctcagcaagatcgaggagctgtatgacgcgtactgcctc
caccggagactccgggacggagccagcaagatggtgaaggcgtatacggcctcgcatctc
agcaaggaggcccgggagagtttagcagaggccaacaaaggatacaaggagtacacagag
aacatgtgtttgctggagagcgacctggagaaccagctgggagagttccacatcaggatg
aaaggtctggccggatttgctcgattatgttccggtgaccagtatgagatcttcatgaag
tacggtcgccagcggtggaagctccgcggccgaatagagatcaacggaaagcaggtgtgg
gacagtgaagacatggtattcgtgccgctcgtcagtgacttcctgtctgtgaaggtgacg
gagctgaaaagcttagccaatcacgtagtggtagggagtgtttcctgcgagaccaaggac
ctgtttgccgccctcccccagacggttgccgtggatattaatgacctcgggaccattaaa
ctcagcctggaagtcacttggaatccatttgataaagatgaccagggatcagtggcgagc
accgtcaacaaagctccaactgtcagcaagagaatctccaccatcttcaaccagagtcct
cctgacacgccatctttacgcgaacaagccttctactctctgcctcgaggcgtgaatatg
cggcagcactggccgctgctggacattttcagagacacgcttagccagagctgctcctgt
cgcgacagctcgccaaccagaccgcccagtgcaaacatgctgcgccgccacgaagaggtc
gacaacgggaccgcgtggtccaattcatcagaatcttccgatgactcctccagtcctcgg
ctttctgtgggggggctacgcaactctacacaccacaagtcggtggtggtaacgccagac
atccagccagctgcgagcgggagctcctccccgcagcccgacatctcctcaactccaaac
tccacccacaaagtcagcaacatcaggggggatcccaacacatccagaaaccgaacgcag
agcgacagggaagaggaagagggggcggtcactgtgatgactagccctgacggcgaggaa
gatgacgcagggaaacagtcttccacgatggcagatggggcgacgaccatcggccacgcc
tcccggagcttctcgcggtctctcagccacatcagcgaaaacagcgccgacggtgtcatg
gtgacggacaggtcagccgactccggggaggcaatgtctttggcctcggggctgtccgtc
aacgacatcgagatggagctgcccggcagaactccgcccagcggcatcgcctcggactcc
gacatgtcacaaaccgggctcataacgcccgacgacgtcaaggatcagcacaggaagcaa
ctagacacatccgtcaccgtcccgtcaccctcccctcccaggactaaagcagtggactct
aacactccatcacagatgaacacacacccaccgccagagagcaacacgcgcccagagagc
ggcgacgtgtcctacatagcccggtgggtggtggtggaggaggagactgcggcggcggga
gtagactgtctatccggagagggagacggtctggtggacagtgggctggaggacgccctc
actgctgtggtttcctctatggatgattaccgaggacagttccccgagttacagctactg
gagcaagagctgcagctgctgcaggtcacactgaagggcggtaggcacagccggttgccc
agcgtggtcagcctcaccgtggaaacggctctgtgcagctttgacttcctcaacacgtct
gacggggaggaggaagaggagaagggcaacaggagaaagaggagtggcaggtctctgcgg
gacagggattggaccagccccacctcccccctcaccacaggcagcacccctttagatcgc
tgcctggtggtccatctgaagaactgcagcactcagctgttgtgtctggggatgttcggc
cctctgcgctgtggggagatgttcgccttggaccgcctgctgagagaggctcgagtcctg
gaaatcatccgacgtgttgccacgggcaaccccaaccgccttcgacagccggctgacgtg
ataccacagctgggcctgtgcttgggcgctgtgtcgctatggcaacagtgtatggggccg
ggcagcgtgtatagcgtgtctgctgacggcttcctggagacgctttccacgctctacacc
ggggtgctgccagagagggctggcaacatggctgacacagtgttcctgagtctggtggag
cgggtgctggatcagaggttaccgcgtcgaggcggcagcagagacggagtgatggtgacg
ctgttccagttgtggagttacttagaggccaacagcattatagacatggagacactcatc
accgagctagcagaagaagtgtggctcgtgcagagcttggcgtcatgtgaccaggaagtg
atcgtgcccgctttgcggtgtcctgccgagtgcagcctgaggagggaggggcttcacgct
gtggccaaactactgaaagacccgcgaggcaaagtgtcggcatccgccagctccgtgctg
aggagcctggcggcccagcccccccagagggagcaggctctggtcagctgtctggagctg
ctggaagacgagcacgtggacaccagagtgtgtggctgcaaggcattagcgtgtctcaag
gccaaagagagcatcgaccagctggtgtatctttgtcggacggacaaagatgaagtgagg
gacgctgccaagcaagcgctgctggtgctcggagaggaggggaagatggcctacagacat
gtggagacgtcccaggacggcatccccagactctttgctccggggagcatggccagcacc
gccttctaa
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