Pseudoliparis swirei (Mariana hadal snailfish): 130195254
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Entry
130195254 CDS
T09868
Name
(RefSeq) ELKS/Rab6-interacting/CAST family member 1-like isoform X1
KO
K16072
ELKS/RAB6-interacting/CAST family member 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130195254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130195254
Membrane trafficking [BR:
pswi04131
]
Exocytosis
Others
Others
130195254
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
130195254
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cast
CCDC39
Rod_CreS
RBD-FIP
DUF5798
CCDC192
ENOX1
ADIP
CCDC18_1st
Motif
Other DBs
NCBI-GeneID:
130195254
NCBI-ProteinID:
XP_056272665
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All DBs
Position
6:complement(16135914..16153548)
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AA seq
1124 aa
AA seq
DB search
MYGSARSVGRGDANHSGGRDGGGTGNQGSSRSPRLPRSPRMGHRRTNSTEGNGGGPGGGG
GKTLSMENIQSLNAAYANSGPMYLSDNEVAMAGDHIPKSGVTVTTMGRHRVTYGSRGNSS
GVVAASTPNISTLVPGNALLPAGMMAGDALAFGDHHMASTVPHSLRQARDNTILDLQAQL
KEILRENEMLRREVEVKESKLSSSMNSIKTFWSPELKKERALRKDEVSKITVWKEQYRVI
QDEAQHLQMTVQALQDELRIQRDLNQLFQQDPALQGRDLALASEPTEENYRRLYAEHERQ
AKELFLLRKTLEEMELRIDTQKQTLGARDESIKKLLEMLQSKGPSAKASEEDQERTRRLA
DAEMHRHHLESLLDQRDREINALREELHRRFEGTPESTKTKALQTVIDMKDAKMNSMERG
LRDMEEELLMLKSNGLLSCEERQEEMKQMEVYRSHMKFMKNKIEQVKQDLSRKDTELLGL
RTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKESTLNKKSKQI
QEMSEEKGTLNGEIHDLKDMLDVKERKVNVLQKKIENLQEQLWDKEKQMSSLKERVKSLQ
ADTSNTDTALTTLEESLAEKERIIERLKEQRDRDGREKTEEIDSNKKELKELKEKVSLLQ
GDLSDRETSLLDLKEHASSLASSGLKKDSKLKSMEIALEQKREECLKVENQLKRAQNATL
EAQANTELAEHIKNLEQEVARHKEDSGKAQVEVDRLLEILREMENEKNDKDKKINELERQ
TKDQSKKVASLKHKEQVEKSRNARLMDEARKREDNMSEQDALRQKSERIEELEEALRESV
QITTEREMVLAQEEAARSLQEKQKHSLKPMHESHLAHFKWSKMEELLGAMEKVKQELESM
RAKLSSTQQSLCEKETHLSTLRVERRKHLEEVLEMKQEALLAAISEKDANIALLELSSSK
KKKTQDEVALLKREKDRLVQQLKQQTQNRMKLMADNYEDDHLKTAPDQTNHKPSPDQMIA
PLLALSQNRSKLKLYIAHLTDLCHDRDPSILSQLTPPSHYHHSDPDDWEEELQKMSVEQV
ERELDVCEKESGELQEYANSVLQQIADYCPDILEQVVNALEESC
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgtacggtagtgcccgctctgttggcagaggggatgccaaccatagtggaggtagagat
ggaggtggtactggcaatcagggatctagccgttcccctcgccttccccgttctcctcgg
atgggacaccgtcgcaccaacagcaccgaaggcaatggaggaggtcctggaggaggagga
ggcaaaaccctttccatggaaaacatccagtccctcaatgcagcgtatgccaactcagga
ccaatgtacctgagtgacaatgaggttgccatggcaggtgaccacattcccaaaagtggt
gtgacagtcacgaccatggggagacatagggtgacatacgggtcaaggggcaacagcagt
ggagttgtggctgctagcacccccaacatctccaccttagtgcctggcaatgctctgctg
ccagcaggcatgatggcaggtgatgctctcgcttttggggaccaccacatggcttccact
gtgccccactctctaaggcaggccagagataacaccatactggacttgcaggcccaactg
aaagagattctgcgtgagaatgagatgctgcggcgagaggtggaggttaaggagagcaag
ctcagctcctccatgaattctatcaagaccttctggagcccagaattaaaaaaggagcga
gctctcaggaaagatgaggtttccaagatcacagtctggaaggagcaatatcgcgtgatt
caagatgaagcacagcatctccagatgactgttcaagctcttcaggacgaactgaggatc
cagagggacttgaatcagctgtttcagcaagaccccgccctccaaggccgggacctggcc
ctcgcctctgaacccacggaggagaactaccggcgactatatgcggagcacgagaggcag
gccaaagagctcttcctcctaagaaagaccctcgaggagatggagctcaggattgacacg
caaaagcaaactctgggagccagagacgagtctatcaagaaacttctggagatgctgcag
agcaaagggccgtctgccaaggcttcagaggaggaccaggagcggaccaggagactggct
gatgcagagatgcacaggcatcaccttgagagtttactggaccagagagacagggagatt
aatgcactcagagaggagctgcaccgtcgattcgagggaacccctgagtccacaaaaact
aaggctctgcagactgtcatcgacatgaaggatgcaaaaatgaattccatggagcgtggc
ctgcgggacatggaggaggagctgctcatgctgaaatccaatggcctgctgagctgtgag
gagcggcaggaggagatgaagcagatggaggtctaccgcagccacatgaaattcatgaag
aacaagatagagcaggtgaagcaggacctctccaggaaggacaccgagctgcttggtttg
aggaccaagctggagacgctcaccaaccagttctcagacagcaagcagcacatcgaagtc
ctcaaggagtccctcactgccaaagagcagcgagccgccatcttacagacggaggtggat
gccttgcgcctgcgcttggaagagaaggagtccactctgaataagaagagcaaacagata
caagaaatgtcagaagagaagggcactctcaacggggagatccacgacctcaaagacatg
ctggatgtcaaggagcgcaaagtcaatgtgcttcagaagaagattgagaacctgcaggag
cagctgtgggacaaggagaagcagatgagcagcctgaaggagagggtcaagtctttgcag
gcggacacctccaacaccgacactgctctcaccacactggaggagtctcttgcagaaaag
gagcgcattattgagcgtctaaaagagcagcgagatcgagacggccgggagaagacggag
gagattgacagcaacaagaaggaactgaaagagctgaaggagaaagtgagcctactgcag
ggagacttgtcggacagagagacgtctttgttggacctgaaggagcatgcatcgtccctg
gcctcctccggtctgaagaaggactccaaactcaagagtatggagatcgccttggagcag
aagagggaggagtgcctcaaagtggagaatcagcttaagagagctcaaaacgcaaccctg
gaagctcaggccaacactgagctggccgagcacattaagaacctcgaacaggaagtggcc
cgccacaaggaggattctgggaaggcccaggttgaggtggaccgcctgctggagatcctt
cgggaaatggagaatgagaagaatgacaaggacaaaaagatcaatgagctggagaggcag
acaaaggaccagtcaaagaaggtggcttctctcaagcacaaggagcaggtggagaaaagt
aggaatgctcgactcatggatgaggccaggaagagggaggacaacatgtctgagcaggac
gctctgcgtcagaagtctgagcgcatagaggagctggaggaggccctgagagaaagcgtt
cagatcacgacggagcgagagatggtgctggcacaggaagaggctgccaggtctctccag
gagaaacagaagcactcactcaaaccaatgcatgagtcccacctcgcccactttaagtgg
tctaagatggaggagctgctgggggccatggagaaagtgaagcaagagctggagtccatg
agagccaaactgtcctccacccagcagtctctgtgtgagaaagagactcatctctcaacg
ctgcgagttgagcgcagaaaacacttggaggaggtgctggagatgaagcaggaggcgctg
ctggctgcaatcagcgagaaggacgcgaacatagccctgctggagttatcctcctccaag
aagaagaagacccaggatgaggtggcgctgctgaaacgggagaaggaccgattggtgcaa
cagctcaaacagcagactcagaacagaatgaaactgatggcagataactatgaggatgac
catctgaagactgcgcctgaccagaccaatcacaaaccctctccagatcagatgatagcc
cctcttctagccctgtcccagaaccgcagtaaactcaagctctacatcgcccacctgact
gacctctgccatgaccgcgaccccagcatcctcagccagctcacgccgccctctcactac
caccacagcgaccccgacgactgggaggaggagctccagaagatgagtgtcgaacaggtc
gagagagagctggatgtgtgtgagaaggagagcggggagctgcaggagtacgccaactct
gttctccagcagatcgcagactactgccccgatatcctggagcaggttgtcaatgccctg
gaggagtcgtgctga
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