Pseudoliparis swirei (Mariana hadal snailfish): 130195310
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Entry
130195310 CDS
T09868
Name
(RefSeq) F-box/LRR-repeat protein 14-like
KO
K10280
F-box and leucine-rich repeat protein 14
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130195310
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
130195310
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
LRR_Zer-1
LRR_At1g61320_AtMIF1
LRR_RPS2
LRR_At5g56370
F-box
LRR_R13L1-DRL21
LRR_EndoS
LRR_14
LRR_8
SAM_Ste50p
Antiterm
Motif
Other DBs
NCBI-GeneID:
130195310
NCBI-ProteinID:
XP_056272737
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All DBs
Position
6:16132559..16135579
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AA seq
403 aa
AA seq
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MFEMETHISCLFPEILAIIFSYLDVKDKGRVAQVCAAWRDASYHKSVWRGVEAKLHLRRA
NPSLFPSLQTRGIKKVQILSLRRSLSYVIQGMPHIESLNLCGCFNLTDNGLGHAFVQDIP
SLRVLNLSLCKQITDSSLGRIAQYLKNLEVLELGGCSNITNTGLLLIAWGLHRLKSLNLR
SCRHVSDVGIGHLSGMTRSAAEGCLSLEKLTLQDCQKLTDLSLKHVSKGLNKLKVLNLSF
CGGISDAGMIHLSHMTHLCSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKIGDQSL
AYIAQGLYQLKSLSLCSCHISDDGINRMVRQMHDLKTLNIGQCVRITDKGLELIADHLTQ
LTGIDLYGCTKITKRGLERITQLPCLKVLNLGLWQMTESEKVR
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaatggagacgcatatatcgtgccttttcccggagatcctggccattattttc
agttatctggacgttaaagacaaaggaagagtagcccaagtgtgcgcggcctggagggac
gcgtcctaccacaagtccgtgtggaggggggtggaagccaagctccatctgcggagagcc
aacccgtctctgttccccagtctgcagactcgggggatcaaaaaagttcaaattctcagc
ctccggcgaagtctgagctacgtgattcaagggatgccgcacatcgaaagccttaacctg
tgtgggtgtttcaacctcacggacaacggacttggccatgcctttgtgcaggacatccca
tcgctgcgggtgctgaacctcagcctttgtaaacagatcactgactccagcctgggcagg
attgcccagtatctaaaaaacctggaggtgcttgaacttgggggatgcagcaatatcacc
aacaccggcctgttgctcattgcctggggcttgcacagactcaagagccttaacctgcgc
agctgcaggcatgtgtccgatgtgggcatcggtcacctgtcgggcatgacccgcagcgcg
gcagagggctgcctgtccttggagaagttaaccttgcaggactgccagaagctgaccgat
ctttccctgaaacacgtctcaaagggccttaacaagctcaaagtgctcaacctcagcttc
tgcggcgggatatcagatgcggggatgatccacctgtcgcacatgacgcacctgtgcagc
ctgaacctgcggtcgtgtgataacatcagtgacacggggataatgcatctggccatgggc
tccctccggctgtctggactcgacgtctccttctgtgacaagatcggagaccagagcctg
gcttacatcgcccaggggctgtaccagctcaagtcgctctctctctgttcctgccatatc
agcgatgacggcatcaacaggatggtacggcagatgcacgacctcaagactctcaacatt
ggacagtgtgtgcggatcacagacaaagggttggagttgatagctgaccacctgactcag
ctgacagggatcgatctgtacggttgtactaagatcaccaagaggggtctggagaggatc
acccagctcccgtgccttaaagtgttgaacctgggactgtggcagatgaccgagagtgag
aaagtgaggtga
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