Pseudoliparis swirei (Mariana hadal snailfish): 130195315
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Entry
130195315 CDS
T09868
Symbol
samm50
Name
(RefSeq) sorting and assembly machinery component 50 homolog A isoform X1
KO
K07277
outer membrane protein insertion porin family
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
130195315 (samm50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pswi03029
]
130195315 (samm50)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswi02000
]
130195315 (samm50)
Mitochondrial biogenesis [BR:
pswi03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
130195315 (samm50)
Transporters [BR:
pswi02000
]
Other transporters
Pores ion channels [TC:
1
]
130195315 (samm50)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
Motif
Other DBs
NCBI-GeneID:
130195315
NCBI-ProteinID:
XP_056272745
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All DBs
Position
6:4792555..4800208
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AA seq
472 aa
AA seq
DB search
MGTVHARSLDPLPMRGPELGVQPDDIEAPEIEHELKQEVLENKNVVVQRVHIDGLGRTKD
DMLTYEIAEVFRAKNLIDVMRRSHEARQKLLGLGIFRKVEVVIDTSRGEHALPNGLDVTF
EVTELRRMTGSYNTMVGNNEGSMVLGLKLPNVLGRGEKMTFQFSYGTKETSYGLSFFKPQ
PGNFERNILLNVYKVTGQFPWSSLRETDRGVSGELSFPVWKTTQILKWEGVWRELGCLAR
TASFAVREESGHTLKSSLSHSMVIDTRNSSILPRRGGLMKIHQELAGYTGGDASFLKEDF
EIQLNKTLFWDSVLSASLWGGLLLPIGDKPTNIADRFYLGGPTSIRGFSMYSMGPQSEDM
AGDYLGGEGYWAGGLHLYTPLPFRPGKGGFGDLFRMHFFLNAGNLCNLNYGEGPGAHLKK
LAECIRWSYGLGIVLRLGNIARLELNYCIPMGVQSGDRICDGFQLGAGIRFL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgtccacgccaggagcctggaccctctgcccatgcgagggcccgagctcgga
gttcaacctgacgacatcgaggctccggagatcgagcacgagctgaagcaagaagttctc
gagaacaagaatgtcgtggttcaacgggtccacatagacgggctcggaagaaccaaggac
gacatgctgacttatgaaatcgcggaagttttccgggcaaagaacttgattgacgtgatg
cggaggtcccacgaagcccgacagaagctgctgggtctcggcatcttcaggaaagtggaa
gttgttatcgacacttcccgaggcgagcacgctcttcccaacggcctcgacgtgaccttc
gaggtcaccgagctgaggcggatgacgggcagctacaacaccatggtgggaaacaacgag
gggagcatggtcctgggcctgaagttgcccaatgtattaggtcggggggagaaaatgact
ttccagttctcctacggcaccaaagaaacctcctacggcctttctttcttcaaaccccag
ccaggaaactttgaacggaatatcttgctcaacgtgtacaaagtgacgggtcagtttcca
tggagttctctcagggagacggaccgaggcgtctccggagaactgagcttccccgtgtgg
aagaccacccaaatcctgaagtgggagggcgtgtggcgggagctgggctgtctggcccgc
accgcctcgttcgccgtccgggaggagagcggccataccctcaagtcctcactttcgcac
tcgatggtcatcgacaccagaaactcctccattctcccccgaagaggaggcctgatgaag
atccatcaggagctcgctggttacaccgggggagacgccagcttcctgaaggaggacttt
gagatccagctcaataaaactctcttctgggactcggtcctttctgcctcgttgtggggc
ggtttgctccttcccatcggcgacaagccaacaaacatagccgacaggttctatctcggg
ggccccaccagcatcaggggcttcagtatgtacagtatgggcccgcagagtgaagatatg
gcaggcgactacctgggaggagagggctactgggccgggggcctccacctctacacccct
ctccccttcagaccgggcaaagggggcttcggggacctcttcaggatgcacttcttcctc
aatgccggaaacctttgtaacctcaactacggcgaggggccgggagcacatttaaagaaa
ctcgcagaatgcatccgctggtcgtacggactcgggatcgtgctgcgtttggggaacatc
gcccgactggaactgaactactgcattccgatgggagtccagagtggagacaggatatgc
gacgggttccagcttggagcaggaatccggttcctgtga
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