Pseudoliparis swirei (Mariana hadal snailfish): 130195327
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Entry
130195327 CDS
T09868
Symbol
fan1
Name
(RefSeq) fanconi-associated nuclease 1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
130195327 (fan1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pswi03400
]
130195327 (fan1)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
130195327 (fan1)
DNA repair and recombination proteins [BR:
pswi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
130195327 (fan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAN1_TPR
VRR_NUC
Fan1_SAP
FAN1_HTH
SAP
FliS
BsuBI_PstI_RE
Motif
Other DBs
NCBI-GeneID:
130195327
NCBI-ProteinID:
XP_056272773
LinkDB
All DBs
Position
6:10755514..10762546
Genome browser
AA seq
1011 aa
AA seq
DB search
MAERANKDKLRRSVSLSKSKKKGHVRAGLSAGAAATTSPITSFFSSRPPPKLACPLCGQF
VPRFKINEHIDFQCQNFERGDSNVASASNSVVPSIQLSPTRDPPKPPQLDPENEEEVKET
KTSPYFKKSNPQQAPREMRSKSVVRTIDLGSLSSRLSGKCPKVPKSPQTEDKHSPMCSEK
KLYSSETLRSSQKENLQCLEDNKDCVTVNDLTETSVDTPTALEDPPCSDKGRNLEQKAST
SKSETVLKRVAPTLRSSSSKLSKRKKEATSSGKVSDFRKKAKYEGSGGEPVELLSGESVA
ETADTDRLKAEAPSSSTCEGPLSSEETCEKSAAAAINHDSLDESGPENTASSDQESSQPP
WLPYYLRNFKTVLQAVLENEDDRSLFNQDDMSLVHAFEKLSVMGQKLYVRLFQRKLKWLQ
VNKLDYEEINRDLGPATQELVQGGFLQSEIDLKDLGEALELLPAPELKALAKTFHLGNSG
TLKQQLVDGLLRLSRQKCPFSLSPAQANIGAVILKRAKQLSGSCVHLCRGPRAVFSRILL
LFSLTDTLDEEETAAGGQSQLFTILLVNSGRLAFPDYTVQRKAKVFQDRDDLIRYEASMR
ALQEVVSAMQGGQWEEAMELYTAAKGVWQELRENLDLSLQEELPAFLRSFSTGWAYTRIL
SRGVEILQRLRHYEEAVEELRSLLLQFVYCPDSRGKWWDRLALNLHQHLKKPEQAICAIR
DGLSDPLVRTGPKLSLHQRAVRMNESASMKKYRLQLKELPTIQVQDVTHVTIRGQLFPHE
GGMGKSKFLLPANGDGEESAGTTVICSVEELCLAHYHQQGFDQGIHGEGSTFSTLFALLL
WDIIFMEGIPDVFRNPYQTCPLDLYTDGFYENRKEAIDCRVQLLSESSVETLHAMLEDVW
TSQEGKTCALVSWECFSSLKQAQSLVSCLGGAFLGGIVTRMSKDYRHCRAGLPDLVVWNT
SNNSYKLVEVKGPTDRLSQKQQIWLDELQKLGADVEVCHVTAIGARGARLE
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggccgagagagccaacaaagacaaactcagacgcagtgtgtcgttgtccaagagtaag
aagaaaggccacgtcagagctgggctttctgccggtgctgctgccaccacgtctcccatc
acctcgttcttcagcagccggcctcccccgaagctggcctgccctctgtgtggccagttt
gtaccgagatttaagatcaatgagcacatagattttcaatgtcagaactttgagagagga
gacagcaatgtcgcctcagcaagtaatagtgttgtgccaagcatccagctatcacccaca
agggatcccccaaagcccccacagctggatccagagaatgaagaagaggtcaaagagacc
aagaccagcccttatttcaaaaagagtaaccctcagcaggcaccacgggagatgagaagt
aagagtgtggtcaggacgattgacctgggaagtctctcctccaggttatctgggaaatgt
cccaaggtacctaagagcccgcagacggaggataaacattcaccaatgtgttctgaaaag
aagctatattcttctgagaccctcaggagctcacagaaagaaaatcttcaatgtttagaa
gacaacaaagattgtgtgacagtcaatgaccttacagaaactagtgttgatactccgact
gcgctggaagatccaccgtgttcagataaaggacgcaatcttgaacagaaagcatctaca
tctaaatcagaaactgtcctaaaacgagtcgctccaacgctgcgctcttcttcctccaaa
ctctcaaagagaaagaaggaagcaacttcctctggcaaggtgtctgatttcagaaagaaa
gcaaaatatgaggggagcggcggggagccagttgagttgttatctggtgaaagtgtagca
gagacagctgatacagaccggcttaaagctgaggcaccttcttccagtacttgtgagggc
cctttgagttcagaggaaacatgtgagaaaagtgctgcagcagcgattaatcatgattcc
ctggacgagtcgggtcctgagaacacggctagtagtgaccaggagagctctcagcccccc
tggcttccttactacctgcgtaacttcaagactgtactccaagctgtcctggagaatgag
gacgacaggtcgttgttcaaccaggacgacatgtccctcgtgcatgcgtttgagaaactc
tcagtcatggggcagaagctgtacgtgagactctttcagaggaaactgaagtggcttcaa
gtaaataaactggattatgaagagataaacagagatctgggacctgctactcaggagttg
gttcaaggtggtttcctacaatcagagattgaccttaaggatttgggggaggccctggag
ctccttcctgctcctgaactcaaagctctggctaagactttccatctgggcaattctggg
actctgaaacagcagctggtggacggactcctccgtctgagcagacagaagtgccccttc
tctctgagcccggctcaggccaacatcggggctgtcatcctcaaaagggccaagcagctt
tcgggttcctgtgtgcacctgtgtcgtggtcctcgagctgtcttttctcggattcttctc
ctcttctctctgacggacaccttggatgaagaggagacggcggccggtgggcagagccag
ctcttcaccatcctgctggtgaactcagggcgcctggccttcccagactatacggtgcag
cgtaaagccaaagtgttccaggacagagacgatcttatcaggtatgaagcatccatgcga
gctctgcaagaggtcgtctcagctatgcagggaggtcagtgggaagaagccatggagctt
tacactgctgccaaaggtgtctggcaggagctgagggaaaaccttgacctcagcctccag
gaggagctgcctgctttcctgcgtagcttctccacgggatgggcttacactcggatctta
tccagaggcgtggagatcttgcagaggctacgtcattacgaggaagcagtagaggagctg
cggtctttactgttgcagtttgtttactgtcctgacagccgagggaaatggtgggacaga
ctggcactgaaccttcaccagcacctaaaaaaacccgaacaggctatctgtgctatccga
gatgggctatcggaccctctggtgcgaactggacctaaactttctcttcaccagagagct
gttaggatgaacgagtccgccagcatgaagaagtatcgccttcaacttaaagaactgccc
actatccaagtccaagatgtcacacatgtgacgatccggggacagctgttccctcatgag
gggggaatggggaagtccaagtttcttttaccagcaaatggtgacggggaagagagtgct
gggaccactgtcatctgctctgtggaagagctgtgtttagcacattaccaccagcaaggc
ttcgaccaagggatccatggagaaggctcaacattctcaacattattcgctcttctgcta
tgggacatcatttttatggagggtattccagatgtcttcaggaatccgtaccagacatgt
ccactggatctgtacaccgacggtttctatgagaacagaaaagaggcgatcgactgccgc
gtgcagttactcagtgagtcgtcggtggagacgctgcacgccatgttggaagatgtttgg
acgtcccaggagggtaaaacgtgtgcactggtcagctgggagtgtttctcatcccttaaa
caggcacagtctctcgtgtcgtgcctgggaggagccttcttaggagggatagtaacacga
atgtccaaagactacagacactgccgtgcaggtttgcctgatctggtggtgtggaacacc
tcaaacaacagctacaagctggtagaggtgaaggggcccactgaccggctttcccagaaa
caacaaatatggctggatgagctgcagaagctgggggcggatgtggaagtgtgtcacgtg
acggcaattggagccagaggagctcgtctggaataa
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