Pseudoliparis swirei (Mariana hadal snailfish): 130195343
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Entry
130195343 CDS
T09868
Symbol
rasgrf1
Name
(RefSeq) ras-specific guanine nucleotide-releasing factor 1 isoform X1
KO
K04349
Ras-specific guanine nucleotide-releasing factor 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04010
MAPK signaling pathway
pswi04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130195343 (rasgrf1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130195343 (rasgrf1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RhoGEF
PH
RasGEF_N
SOS1_NGEF_PH
GOLGA2L5
PH_11
MYO6_lever
IQ
Motif
Other DBs
NCBI-GeneID:
130195343
NCBI-ProteinID:
XP_056272801
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All DBs
Position
6:complement(13222954..13247029)
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AA seq
1257 aa
AA seq
DB search
MQKGIRLNDGHVSYLGLLAKKDGTRRGCLSKKSSDNTKWHTKWFALLQNMLFYFENESSS
RPSGLYLLEGCICDRAPSPKPSQSAKECLEKQYYFTVSFTHENQKALELRTQDVKESDEW
VAAISHASYRNLANEHETLMQKYLHLLQIVETEKTVAKQLRQQIEDGEIEIERLKSEISR
LLKDNEKIHASPAAAPTDDDSEIKKIKKVQSFLRGWICRRKWKTIIQDYVRSPHAESMRK
RNQVVFSMLDSEAEYVQQLHILVNNFLRPLRMAASSKKPPITHDDVSSIFLNSETIMFLH
QIFYQGLKARIASWPTLVLADLFDILLPMLNIYQEFVRNHQYSLQILAHCKQNRDFDKLL
KQYEAKPDCEERTLETFLTYPMFRIPRYILTLHELLAHTPHEHVERTSLDYAKSKLEELS
RIMHDEVSETENIRKNLAIERMIVEGCEILLDTSQTFVRQGSLIQVPMSEKGKITRGRLG
SLSLKKEGERQCFLFSKHLIICNRGSGGKLHLTKNGVVSLIDCTLLEDPEVTDDEAKSDK
IGQDMEQHLDFKIVVEPKDSQSFTVILVASSRQEKSAWTSDISQCIDNIRCNGLMMNAFE
DNSKVTVPQMIKSDSSLYCDDVDIRFSKMMNSCKVLQIRYASVERLLERLTDLRFLSIDF
LNTFLHSYRVFTTADVVLDKLITIYKKPISAIPARSLELFFASSQNSKLLYGEPPSSPRA
TRKFSSPPPLTIAKNLSPNRRRKLSLNIPIITGGKALDLAALSCSSNGYASVYSSISPFS
KTSLDINKLYVSSSVSSKIPDEGEDKKDKVEDTSVSKQDHSVPEESGNDPNQSHEGDLEA
SPSKSPTTPKNIKCKNSSEFSLFSYNNGMVMSSCRELDNNRSVVSAASAFAIATAGANEG
TPTKEKYRRMSLASTGFPTDQRNGDKEFVIRRAATNRVLNVLRHWVSKHSPDFESNNELK
TKAIAFLEEVMHDPELLTLERKVAANIIRTLTQEDHSDNQITLEDVTKLMGEGKAEHFES
QSALEIAEQLTLLDHLVFKVIPYEEFFGQGWMKNDKNEKTPYIMRTTKHFNDISNLIATE
ILRCDDVVTRLLVIEKWVAVADICRCFHNYNAVLEITSSLNRSSVFRLKKTWLKASKQTK
ALIDKLQKLVSSEGRFKNLREALKNCDPPCVPYLGMYLTDLAFIEEGTPNYTEDNLVNFS
KMRMISHIIREIRQFQQTAYKIDLQPKVAQYLLDNSFVLDEESMYEASLRIEPKVPN
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagggaatacgacttaatgatggtcatgtcagctacctggggcttttggcgaaa
aaggatggcacaagacgagggtgcttgagcaaaaagagctcagacaacacgaaatggcac
acaaagtggtttgctttgttacaaaatatgctcttttattttgagaacgagtccagctcc
cgaccctctggattatacctgttggagggatgcatatgcgacagggcgccttcaccgaaa
ccttcacagtcagccaaggagtgtttggaaaagcagtactatttcaccgtcagcttcacc
catgaaaatcaaaaggcgctcgagttacgcacgcaagatgtaaaggagagcgatgaatgg
gtggctgcaatatcacacgccagttacagaaacttggccaacgagcatgagactctcatg
cagaagtatcttcatctgcttcagattgtggagacggagaaaacagttgctaagcaactt
cgacaacagatagaagatggggaaatagaaattgaaaggcttaagtcagagatctctcgg
ctgctcaaagacaatgagaagattcacgcgagccctgcagccgccccaactgatgacgac
tcagaaatcaagaaaatcaaaaaagttcagagcttcctgcgaggctggatctgcaggagg
aagtggaagacaatcatccaggattatgtccgctcaccgcatgcagagagcatgaggaag
aggaaccaggtggtgttcagcatgttggactcggaggccgagtacgtccagcagcttcac
atcctggtgaacaacttcctgaggccgctccgcatggcagccagctccaagaaaccgccc
atcacccacgatgatgtcagcagcatattcctcaacagtgaaactattatgtttctacat
cagatattttaccagggtctaaaagccagaatagcgagctggccaacattagtgctggcc
gacctgtttgacatcctgctgcccatgctgaacatctaccaggagtttgtgaggaaccac
cagtacagcctgcagatcctggctcactgcaagcagaaccgagactttgacaagctgctg
aagcagtacgaggccaagcccgactgtgaggagaggactctggagaccttcctcacctac
cccatgttccggattccccgctacattcttacactccacgaacttctggcccacacaccc
catgaacatgtagagagaaccagtctggactacgccaaatctaagctagaggagctttcc
agaatcatgcacgacgaagtgagtgagaccgagaacatcaggaagaacctggcaatagag
cgcatgattgtagagggctgcgagattctcctcgacaccagccagacgtttgtgagacaa
gggtctctcatccaggtgccgatgagcgagaagggcaagatcacccgcgggcgactgggc
tctctgtccctaaaaaaggagggggagaggcagtgctttctcttctccaagcatttaatc
atctgcaatcggggttctgggggaaagcttcatctcaccaagaatggagtagtctcgctt
atagactgcactctattggaggaccctgaggtaacagatgatgaagccaagtcagacaag
attggccaggacatggagcagcacctggacttcaagattgtcgtggagccaaaggacagc
cagtcattcacagtcatcctggtggcctcctcgaggcaggagaagtctgcatggaccagt
gacatcagccagtgcatagacaacatccgctgcaatgggctgatgatgaacgccttcgaa
gacaactccaaagtcacagtgccacagatgatcaagtcagattcaagtctgtactgcgat
gacgtagacatccgcttcagtaagatgatgaactcctgcaaggtgctgcagatccgctac
gccagcgttgagcgcctgctggagagactgactgacctccgtttcctctccatcgacttc
ctcaacaccttcctgcactcctatcgcgtgttcaccacagctgatgtggtgctcgacaaa
ctcatcaccatctacaagaagccgatcagtgccatccctgctcggtccctggagttattc
tttgccagcagtcagaacagtaaactattgtatggagagcctcccagctcccccagagcc
accaggaagttctcctccccacctcctctcactattgccaagaatttatccccaaatcgc
cggcggaagctctccctcaacatccccatcatcactgggggcaaagctcttgacctggct
gccctcagctgctcctccaatggctatgcaagcgtgtactcatccatctccccattcagc
aagaccagcttggacatcaacaaactgtacgtgtccagttccgtctctagcaaaatccct
gatgagggagaggacaagaaggacaaggtggaggatacatcagtgagcaaacaagatcac
tctgtaccagaagaaagtggcaatgatccaaaccagagtcatgaaggggatctagaagcc
tctcccagcaaatcaccaacgaccccaaaaaacatcaaatgcaaaaactcctcagagttc
tcactgttttcctacaacaatggcatggtgatgtcctcatgtcgagagctggataacaac
cgcagtgtcgtgtccgctgcctccgcctttgctattgctacagctggagccaatgagggc
acacctaccaaggaaaaatatcgccggatgtccctcgccagtactggcttcccaaccgat
cagagaaatggagacaaagagtttgtgatcagacgagcagcgacgaaccgagtcctgaat
gtcctgaggcactgggtgtccaaacactctccggactttgagagcaacaatgagctgaag
actaaagctattgccttcctggaggaagtgatgcatgaccctgagctgttgaccctggag
aggaaagtagcagccaacatcattaggactctaactcaggaagaccacagtgacaatcag
ataacccttgaagacgtgacaaaactgatgggtgaagggaaggcggagcactttgagagt
cagtctgcattggagatcgcagagcagctcactctgctggaccacctggtgtttaaggtc
atcccatatgaggaattctttggacaaggctggatgaagaatgacaaaaatgagaagacg
ccatacatcatgagaacaacaaagcatttcaatgatataagcaacctgattgctacagag
atcctgcgctgcgatgacgtggtcactcgactgttggtcatagaaaagtgggtggctgta
gcagacatctgccgctgtttccacaactacaacgccgtgctcgagatcacctcctccctc
aaccgcagctctgtcttccgtctcaagaagacctggctcaaggcttccaagcagacaaaa
gcattgattgacaagctgcagaagctggtctcatcagaggggaggttcaaaaacctgaga
gaggcgttgaagaactgtgatcctccctgtgtgccctatctggggatgtacctcacggac
ctggctttcattgaggagggaacgccaaactacacagaagacaacttggtcaacttctca
aagatgagaatgatttctcacatcatcagagaaatcaggcagtttcagcaaacagcatac
aagattgacctgcaaccaaaggtagcccagtacctactggataatagctttgttctggat
gaagaaagcatgtacgaagcctctctcagaattgagccgaaagtgcccaactga
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