Pseudoliparis swirei (Mariana hadal snailfish): 130195372
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Entry
130195372 CDS
T09868
Symbol
si:dkeyp-19e1.3
Name
(RefSeq) USP6 N-terminal-like protein
KO
K20133
USP6 N-terminal-like protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130195372 (si:dkeyp-19e1.3)
Membrane trafficking [BR:
pswi04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
130195372 (si:dkeyp-19e1.3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
130195372
NCBI-ProteinID:
XP_056272837
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Position
6:complement(18646662..18667473)
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AA seq
817 aa
AA seq
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MKKDIDTLIAEERTEIISKYDKGRQEGINIDPWEDADYSIYKVTDRFGFLHEEGLPTPSA
TEEKQKHQEIERVAKWLKMVKKWDKYKNSEKLVKRVYKGIPLQLRGQAWALLLDIEKVKQ
DNVGKYERMKLQARYFSAEIKQIDLDVNRTFRNHIMFMDRFGVKQQALFHVLAAYSVYNT
EVSYCQGMSQIAAILLMYLNEEDAFWALSQLLTNSKHAMHGFFIPGFPKLHRFQAHYELV
LSKMLPKLKKHLDKEQMTSGIYTTKWFLQCFIDRTPFTLTLRLWDIYIMEGEKTLTAMAY
TTLKLHRKRLQKLPLEDLREFLQEQVAVSFFSPDDVVVEQLQTAMSELRSKKLDQPPPAK
SEEQPKTPLGQERPVLLQPDSPLEVKVNMLPPPSQPETEALQQTPSSAEHQVSRTPPLAS
PDLVVVHTPGTPPPLRPCRAPPLPPKAHKPGAEGGSDRDGNESLPEVRRSGEVGKPEGPP
GRPETQEEPVDWPPPYLDALAVGTAEEFMDLPDLPPPPFFYTERNDQRRLDGEAHRLGTG
TGSGAQQRSPSPRPASPLVPQMKLLPKPCLKPPASLHLAQKEPAPTKPSSHRAFATSSSS
SPRLPPPPKPTKFPVSLCVPVPTGGRRPSNTSQYDNLSEADEEDRFLERLLGSTPEELPT
TPSNGPHATGRGHDPALYPLPPPPVFIPPSPSSFPPSLCGLPSLPQEPEYEGEDSWVEDS
IIPPPPAYFADRLAPFQRSAASCSDTHRAASPGYSKPFSRGPRDHSAFPAPLLYTGSPPG
QSRPSGPSAVRVPSGQSSPDFCRMPPGGQQLPKSVTF
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggacatagacacattgatagcagaggaacgcactgaaatcatctctaaatat
gacaagggcagacaggagggtatcaacattgacccatgggaggatgctgactacagcatc
tataaggttactgaccgcttcggcttcctgcatgaggaagggttgccgacacccagtgcg
acggaagagaagcaaaagcatcaggagatagagcgagtggcgaaatggctcaagatggtg
aagaagtgggacaagtacaagaacagtgaaaagttggtgaagcgtgtgtataaaggcatc
cctctgcagctgagggggcaggcctgggccttgcttctggacatagagaaagtcaaacaa
gataacgtcggaaaatatgagagaatgaagctgcaggctcgttatttctccgcagagatc
aaacagatagacttggacgtcaacagaaccttcaggaaccacatcatgtttatggaccgc
tttggagtcaagcagcaggcgctgtttcacgtactcgcagcgtactccgtctacaacacg
gaggtgagctactgccaggggatgagtcagatcgctgccattctgctcatgtacctgaat
gaggaagatgccttctgggctctgtcccagctcctcaccaacagcaagcacgccatgcac
gggttcttcatcccagggttccccaaactgcatcgtttccaggcccactacgagctggtc
ctctccaagatgctgcccaagctgaagaaacacctggacaaagagcagatgacatccggc
atttacaccaccaaatggtttctgcagtgcttcattgacagaaccccgttcacccttacc
ctgcgtctatgggacatctacataatggagggagagaagacgctgactgccatggcgtat
acaaccctcaagttacacaggaagcgcctgcagaagcttccattggaggacctgagggag
tttcttcaggagcaggtagccgtgtctttcttctcgcctgatgatgtcgtggtggaacag
ttacagaccgctatgtccgaactccgcagtaaaaagttggaccagccgcccccagccaag
tcagaagagcagccaaagacgcctctgggtcaagagaggccagttctcctgcagccggac
tctcctctggaggtcaaagtcaacatgctgccgccccccagccaacccgaaacagaggcc
ctgcagcagaccccttcttctgcggagcaccaggtctcaagaactcctcctctggcttcg
cccgacctggttgtcgtccacacgccaggaacacctcctccgttgaggccttgcagagcg
cctcccttacctcccaaagcacacaaacccggtgctgagggcggatcggacagggatgga
aatgagtcgcttccagaggttcgccggagcggagaggtcggaaaaccggagggcccgcct
ggacggcctgagacccaggaagagccggtggattggccccccccttacttggatgctctt
gctgtggggactgcggaggagttcatggaccttccagatctgccccctccacctttcttc
tacaccgagcggaatgaccaaaggcgcctggatggggaagcacaccgcctggggactggg
acgggctccggggcccagcagcgctctccttctcctcgcccggcctcaccactggtccct
caaatgaagctattgccaaaaccgtgtctaaaaccaccagcgtcgcttcatctggcacag
aaggaacctgctcccacaaagccttcctctcaccgtgccttcgccacctcctcctcctcc
tcccccagacttcctccgcccccgaagccgaccaagttcccggtctctctctgcgtcccg
gtgcccactggaggccggcggccctccaacacctcccagtatgacaacctctctgaggct
gatgaagaggaccgcttcctggagaggctgcttggctccacgcctgaggaacttccaacc
acgcccagcaatggcccccacgccactggccgaggtcatgaccctgcgctctaccctctg
cctcctcctcccgtgttcatccctccctcgccctcttctttcccaccctcgctgtgcggt
ctccccagtttgccacaggagccagaatatgaaggagaggacagctgggtggaggactcc
atcatcccccctcctccagcttactttgccgacagactggcgcccttccagcggagcgct
gccagctgttcggacacgcacagagccgcctcgcccggttactccaagcctttctctcgg
ggccccagggaccattctgctttccccgccccactgctgtacaccggctctcccccgggc
cagtcccggccctcgggtccgtcggccgtcagagtgccatcgggccaatccagcccggac
ttttgcaggatgcctccaggtggccagcagctgcccaagtcagtgaccttctaa
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